| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874585
Identifier: 160874585
GI number: 160874585
Start: 1768558
End: 1768863
Strand: Direct
Name: 160874585
Synonym: Sbal195_1468
Alternate gene names: NA
Gene position: 1768558-1768863 (Clockwise)
Preceding gene: 160874584
Following gene: 160874588
Centisome position: 33.07
GC content: 45.75
Gene sequence:
>306_bases ATGACTCACTCTTATAAACGGTTCGCCGATTTCTATCCTTTCTATTTATCCCAACACCAGCACCCGATTTGCCGGCAATT ACACTTTGTTGGCAGTAGCTTAGTCCTGCTGCTGATTGGCATTGCCTTGGTTTCACAAGCCTGGTGGCTATGTTGGTTTA TTCCGGTCGTTGGCTACGGTTTTGCGTGGGTGGGACACTTAGTATTCGAGAAGAATCGACCTGCGACATTTCAGTATCCC TTTTACAGTTTGATGGCTGATTGGGTGATGTTTGCTCAGATGATCAGCGGCTTTTTTAAGCGTTAA
Upstream 100 bases:
>100_bases AGCCATCTGCAATTATTTACCCAGCATGACTTTGTCTCTTTAGGCGAGCTCAATATCGGCAGTGTCCATGGTCAGTTATT ATTCTATTCGGTTCAACAAG
Downstream 100 bases:
>100_bases AAAAGCCGTCCGAGTGAGATGCCCATGCCCGTGTGAGAGATCGCTTACAAACGCTGTAGGACATAATGTTTTCTTTTTGA TTGTTTTTTGTTCTCTTATG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 101; Mature: 100
Protein sequence:
>101_residues MTHSYKRFADFYPFYLSQHQHPICRQLHFVGSSLVLLLIGIALVSQAWWLCWFIPVVGYGFAWVGHLVFEKNRPATFQYP FYSLMADWVMFAQMISGFFKR
Sequences:
>Translated_101_residues MTHSYKRFADFYPFYLSQHQHPICRQLHFVGSSLVLLLIGIALVSQAWWLCWFIPVVGYGFAWVGHLVFEKNRPATFQYP FYSLMADWVMFAQMISGFFKR >Mature_100_residues THSYKRFADFYPFYLSQHQHPICRQLHFVGSSLVLLLIGIALVSQAWWLCWFIPVVGYGFAWVGHLVFEKNRPATFQYPF YSLMADWVMFAQMISGFFKR
Specific function: Unknown
COG id: COG4323
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11990; Mature: 11859
Theoretical pI: Translated: 9.48; Mature: 9.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.9 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTHSYKRFADFYPFYLSQHQHPICRQLHFVGSSLVLLLIGIALVSQAWWLCWFIPVVGYG CCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAWVGHLVFEKNRPATFQYPFYSLMADWVMFAQMISGFFKR HHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure THSYKRFADFYPFYLSQHQHPICRQLHFVGSSLVLLLIGIALVSQAWWLCWFIPVVGYG CCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FAWVGHLVFEKNRPATFQYPFYSLMADWVMFAQMISGFFKR HHHHHHHHHCCCCCCEEECHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA