| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is yjcS [H]
Identifier: 160874576
GI number: 160874576
Start: 1760933
End: 1762921
Strand: Reverse
Name: yjcS [H]
Synonym: Sbal195_1459
Alternate gene names: 160874576
Gene position: 1762921-1760933 (Counterclockwise)
Preceding gene: 160874578
Following gene: 160874572
Centisome position: 32.97
GC content: 47.96
Gene sequence:
>1989_bases ATGCAAAAATCTTTGATGACATTGAGTATTATCGCAACGTTCTCCCTCAGCGCTACGGCGGCAGAACACGAGCATGAACA TATCAGTCTGCACTATCAGGGAAAGCCTGCGACCCAGCAAACCGCTGAGGTCAACAAGGCCACAGCAGCCACTCTAAATT ACACCGATAAAAAAGCCTTTGAAGAGTTTTCTAAGAATCTCATCGCCGAACTCGATGAACCAACTGCCTCCATTTTACGC ACCGAATTCAGCTTTATCGGCGACAAAACCCCAGACACAGTCAATCCCTCACTCTATCGCCAAGCTCAGTTGAATATGGT GTCTAACGGCTTATACAAGGTCACAGATGGCATTTATCAAGTTCGCGGCACTGACTTGTCGAACTTAACGCTTATCCGCG GTAAAACGGGGTGGATCCTTTATGACGTGCTGCTCACCAAAGAAGCGGCAAAGTTATCATTGGAGTTTGCGCTAAAAAAC TTGCCTGAGGGTAATGACTTACCTGTGGTGGCGATGATTTATTCCCACAGCCATGCGGACCATTTTGGCGGTTCGCGGGC CATTAAAGACATGTACCCTAAGGTCAAAGTCTATGGTTCCAATAACATCACCAAAGAAATTGTCGACGAAAACGTTCTCG CCGGTAATGCCATGAGCCGCCGCGCCGCCTATCAATACGGCGCAACATTAGAGCGCAACGAGCAAGGCATTGTCGATGCC GCACTCGCAAAAGGATTATCCAAAGGCGAAGTGACCTACGTAAAACCCGATATCACCCTCAACAGCAAAGATAAGTGGGA AATACGCACCATTGATGGCATAGACATGGTGTTTATGGATGCCTCAGGCACAGAAGCCGCCTCGGAAATGGCCACCTATA TTCCCTCAATGAAGGCCCTATGGACGGGTGAACTCACCTACCATGGCATGCACAACATTTACACCTTGCGCGGTGCAAAA GTCCGTGACGCCATCAAATGGTCTAAGGATATCAATGCATTGCTGACACGCTTTGGCGATGATGCGCAGGTTCTTTTTGA GGCCCATTCAGCGCCAGTCTTTGGCAATGCGGATGTAAATGCTTACCTCAGAATGCAAAGGGATAACTATGGTCTAGTGC ATAATCAAACCCTGCGTTTAGCCAATAATGGCGTGGGTATTCAAGATATTGGCGATGCGATTCAAACCACTATCCCTAAG GCGGTGCGCGATACTTGGTATACCAATGGCTACCATGGCACCTACAGCCATAATGCCAAAGCCGTGTACAACATGTATTT AGGCTATTTCGATATGAATCCAGCCAACTTGAACCCACTGCCGACAAAGGAGGAAGCGGCCAAATTTGTCGAGTATATGG GCGGTGCTAAAGCCGTACTCAAACATGCTAAAGCTGACTATGCCCAAGGCGAATACCGTTTCGTGGCAACGGCACTGAAT AAAGTGATCATGGCAGAACCCGATAACGAAAAGGCCAGACAATTACTTGCCGATACCTATGAGCAACTGGGCTACCAAGC CGAAGGCGCAGGCTGGCGTAACATTTATCTTACCGGCGCCCAAGAGTTACGCGTAGGGATCCAACCCGGCGCGCCCAAAT CGGCATCGGCAGATATTTTAGGTGAAATGGAGATCTCGACTCTGTTTGACTTCCTAGCCGTAAAAGTCGATAGCATCAAG GCCGCAGAACTTGGACTGATCAGGCTTAATGTGATTAACCCCGATACCAAAGACACACTCTACGTCGAGCTAAGCAACGG TAACTTAAGCAATATTAAGGTTGATAAACCAATAGAGGCCGATACCAATCTTTATATTGATAAGCGCTACATTACCGGGA TTTTACTCGGCAAAGTGACCCTCAAAGACTTACTTGCCAACGGCACGGCCAAACTAGAAGGCGATAAAGCGGCCTTCGGT AAGATAGCGTCGACCTTAGTAAAATTTGATGAAAACTTTGAAATCGTCCCACTTCCGAACGCGAAGTAG
Upstream 100 bases:
>100_bases ATGAATATTACAACCCAAGCTAACGCGAGTTATCTAAATACACAAGCTGTCTATACTCAAACCATCAACGACACTATCCC TCCCATCTGTAGGTAAAATT
Downstream 100 bases:
>100_bases TGACATAAACGCCCTGATGATTCAGGGCGTTTTTATGGAAAAAGATTAACTAGCGTATATTCGCCTTGAACACTTCTAAC ACTTGGCTGGCGCTAGCGTT
Product: beta-lactamase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 662; Mature: 662
Protein sequence:
>662_residues MQKSLMTLSIIATFSLSATAAEHEHEHISLHYQGKPATQQTAEVNKATAATLNYTDKKAFEEFSKNLIAELDEPTASILR TEFSFIGDKTPDTVNPSLYRQAQLNMVSNGLYKVTDGIYQVRGTDLSNLTLIRGKTGWILYDVLLTKEAAKLSLEFALKN LPEGNDLPVVAMIYSHSHADHFGGSRAIKDMYPKVKVYGSNNITKEIVDENVLAGNAMSRRAAYQYGATLERNEQGIVDA ALAKGLSKGEVTYVKPDITLNSKDKWEIRTIDGIDMVFMDASGTEAASEMATYIPSMKALWTGELTYHGMHNIYTLRGAK VRDAIKWSKDINALLTRFGDDAQVLFEAHSAPVFGNADVNAYLRMQRDNYGLVHNQTLRLANNGVGIQDIGDAIQTTIPK AVRDTWYTNGYHGTYSHNAKAVYNMYLGYFDMNPANLNPLPTKEEAAKFVEYMGGAKAVLKHAKADYAQGEYRFVATALN KVIMAEPDNEKARQLLADTYEQLGYQAEGAGWRNIYLTGAQELRVGIQPGAPKSASADILGEMEISTLFDFLAVKVDSIK AAELGLIRLNVINPDTKDTLYVELSNGNLSNIKVDKPIEADTNLYIDKRYITGILLGKVTLKDLLANGTAKLEGDKAAFG KIASTLVKFDENFEIVPLPNAK
Sequences:
>Translated_662_residues MQKSLMTLSIIATFSLSATAAEHEHEHISLHYQGKPATQQTAEVNKATAATLNYTDKKAFEEFSKNLIAELDEPTASILR TEFSFIGDKTPDTVNPSLYRQAQLNMVSNGLYKVTDGIYQVRGTDLSNLTLIRGKTGWILYDVLLTKEAAKLSLEFALKN LPEGNDLPVVAMIYSHSHADHFGGSRAIKDMYPKVKVYGSNNITKEIVDENVLAGNAMSRRAAYQYGATLERNEQGIVDA ALAKGLSKGEVTYVKPDITLNSKDKWEIRTIDGIDMVFMDASGTEAASEMATYIPSMKALWTGELTYHGMHNIYTLRGAK VRDAIKWSKDINALLTRFGDDAQVLFEAHSAPVFGNADVNAYLRMQRDNYGLVHNQTLRLANNGVGIQDIGDAIQTTIPK AVRDTWYTNGYHGTYSHNAKAVYNMYLGYFDMNPANLNPLPTKEEAAKFVEYMGGAKAVLKHAKADYAQGEYRFVATALN KVIMAEPDNEKARQLLADTYEQLGYQAEGAGWRNIYLTGAQELRVGIQPGAPKSASADILGEMEISTLFDFLAVKVDSIK AAELGLIRLNVINPDTKDTLYVELSNGNLSNIKVDKPIEADTNLYIDKRYITGILLGKVTLKDLLANGTAKLEGDKAAFG KIASTLVKFDENFEIVPLPNAK >Mature_662_residues MQKSLMTLSIIATFSLSATAAEHEHEHISLHYQGKPATQQTAEVNKATAATLNYTDKKAFEEFSKNLIAELDEPTASILR TEFSFIGDKTPDTVNPSLYRQAQLNMVSNGLYKVTDGIYQVRGTDLSNLTLIRGKTGWILYDVLLTKEAAKLSLEFALKN LPEGNDLPVVAMIYSHSHADHFGGSRAIKDMYPKVKVYGSNNITKEIVDENVLAGNAMSRRAAYQYGATLERNEQGIVDA ALAKGLSKGEVTYVKPDITLNSKDKWEIRTIDGIDMVFMDASGTEAASEMATYIPSMKALWTGELTYHGMHNIYTLRGAK VRDAIKWSKDINALLTRFGDDAQVLFEAHSAPVFGNADVNAYLRMQRDNYGLVHNQTLRLANNGVGIQDIGDAIQTTIPK AVRDTWYTNGYHGTYSHNAKAVYNMYLGYFDMNPANLNPLPTKEEAAKFVEYMGGAKAVLKHAKADYAQGEYRFVATALN KVIMAEPDNEKARQLLADTYEQLGYQAEGAGWRNIYLTGAQELRVGIQPGAPKSASADILGEMEISTLFDFLAVKVDSIK AAELGLIRLNVINPDTKDTLYVELSNGNLSNIKVDKPIEADTNLYIDKRYITGILLGKVTLKDLLANGTAKLEGDKAAFG KIASTLVKFDENFEIVPLPNAK
Specific function: Unknown
COG id: COG2015
COG function: function code Q; Alkyl sulfatase and related hydrolases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI87082368, Length=640, Percent_Identity=42.03125, Blast_Score=459, Evalue=1e-130, Organism=Saccharomyces cerevisiae, GI6324409, Length=635, Percent_Identity=39.6850393700787, Blast_Score=463, Evalue=1e-131,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001279 - InterPro: IPR003033 [H]
Pfam domain/function: PF00753 Lactamase_B [H]
EC number: NA
Molecular weight: Translated: 72969; Mature: 72969
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQKSLMTLSIIATFSLSATAAEHEHEHISLHYQGKPATQQTAEVNKATAATLNYTDKKAF CCCCCEEEEEEEEECCCHHHHCCCCCEEEEEECCCCCCHHHHHCCCCEEEEECCCHHHHH EEFSKNLIAELDEPTASILRTEFSFIGDKTPDTVNPSLYRQAQLNMVSNGLYKVTDGIYQ HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEE VRGTDLSNLTLIRGKTGWILYDVLLTKEAAKLSLEFALKNLPEGNDLPVVAMIYSHSHAD ECCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC HFGGSRAIKDMYPKVKVYGSNNITKEIVDENVLAGNAMSRRAAYQYGATLERNEQGIVDA CCCCCHHHHHCCCEEEEECCCCCHHHHHCCCHHCCCCHHHHHHHHCCCCEECCCCCCHHH ALAKGLSKGEVTYVKPDITLNSKDKWEIRTIDGIDMVFMDASGTEAASEMATYIPSMKAL HHHCCCCCCCEEEECCCEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCHHE WTGELTYHGMHNIYTLRGAKVRDAIKWSKDINALLTRFGDDAQVLFEAHSAPVFGNADVN EECCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCE AYLRMQRDNYGLVHNQTLRLANNGVGIQDIGDAIQTTIPKAVRDTWYTNGYHGTYSHNAK EEEEEECCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AVYNMYLGYFDMNPANLNPLPTKEEAAKFVEYMGGAKAVLKHAKADYAQGEYRFVATALN EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEHHHC KVIMAEPDNEKARQLLADTYEQLGYQAEGAGWRNIYLTGAQELRVGIQPGAPKSASADIL CEEEECCCCHHHHHHHHHHHHHCCCEECCCCCEEEEEECHHHEEEECCCCCCCCCCCHHC GEMEISTLFDFLAVKVDSIKAAELGLIRLNVINPDTKDTLYVELSNGNLSNIKVDKPIEA CCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCC DTNLYIDKRYITGILLGKVTLKDLLANGTAKLEGDKAAFGKIASTLVKFDENFEIVPLPN CCCEEEEHHHHEEHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCC AK CC >Mature Secondary Structure MQKSLMTLSIIATFSLSATAAEHEHEHISLHYQGKPATQQTAEVNKATAATLNYTDKKAF CCCCCEEEEEEEEECCCHHHHCCCCCEEEEEECCCCCCHHHHHCCCCEEEEECCCHHHHH EEFSKNLIAELDEPTASILRTEFSFIGDKTPDTVNPSLYRQAQLNMVSNGLYKVTDGIYQ HHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCEEECCCEEE VRGTDLSNLTLIRGKTGWILYDVLLTKEAAKLSLEFALKNLPEGNDLPVVAMIYSHSHAD ECCCCCCCEEEEECCCCEEEEEEEHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEECCCCC HFGGSRAIKDMYPKVKVYGSNNITKEIVDENVLAGNAMSRRAAYQYGATLERNEQGIVDA CCCCCHHHHHCCCEEEEECCCCCHHHHHCCCHHCCCCHHHHHHHHCCCCEECCCCCCHHH ALAKGLSKGEVTYVKPDITLNSKDKWEIRTIDGIDMVFMDASGTEAASEMATYIPSMKAL HHHCCCCCCCEEEECCCEEECCCCCEEEEEECCCEEEEEECCCCHHHHHHHHHCCCCHHE WTGELTYHGMHNIYTLRGAKVRDAIKWSKDINALLTRFGDDAQVLFEAHSAPVFGNADVN EECCEEECCCCCEEEECCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCEECCCCCE AYLRMQRDNYGLVHNQTLRLANNGVGIQDIGDAIQTTIPKAVRDTWYTNGYHGTYSHNAK EEEEEECCCCCEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCE AVYNMYLGYFDMNPANLNPLPTKEEAAKFVEYMGGAKAVLKHAKADYAQGEYRFVATALN EEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHCCCCCCCCEEEEHHHC KVIMAEPDNEKARQLLADTYEQLGYQAEGAGWRNIYLTGAQELRVGIQPGAPKSASADIL CEEEECCCCHHHHHHHHHHHHHCCCEECCCCCEEEEEECHHHEEEECCCCCCCCCCCHHC GEMEISTLFDFLAVKVDSIKAAELGLIRLNVINPDTKDTLYVELSNGNLSNIKVDKPIEA CCHHHHHHHHHHHHHHCCCCEEEEEEEEEEEECCCCCCEEEEEECCCCCCEEEECCCCCC DTNLYIDKRYITGILLGKVTLKDLLANGTAKLEGDKAAFGKIASTLVKFDENFEIVPLPN CCCEEEEHHHHEEHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHHCCCEEEEECCC AK CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8265357; 9278503 [H]