| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874556
Identifier: 160874556
GI number: 160874556
Start: 1727535
End: 1728662
Strand: Direct
Name: 160874556
Synonym: Sbal195_1438
Alternate gene names: NA
Gene position: 1727535-1728662 (Clockwise)
Preceding gene: 160874553
Following gene: 160874557
Centisome position: 32.31
GC content: 48.76
Gene sequence:
>1128_bases ATGAAACTGAAATCGATAGCCGCCGCAGTTGGACTTTGTTTAGCGAGCTTAAGTGTTGCCCACGCCAGCGATAAAACCAT TTACCTCACCTTTGATGATGGTCCAATTGATGCGACCTTAGGACTGTTAGACGCCTTAAAAGACGCCAATATCAAGGCGA CGTTCTTTATCAATGCTTTTCATATGTATGGCGAAGGGGATGAAAACGAAGCGTTAGCGGCTGTCGCCCTACAACGTTTG CTAGACGATGGTCATATTCTGGCAAACCACAGTTACGATCATATGCTGCATAACTGCACCGATGGTGTGCAATCGGGGGC GGTTTATTGCAATCAAGTGGGCCTCTGGCCAGTTAAATCCTATCAAGATGCGGCTACCGACTTTACCTACTTTGTGACGA ACACCGCCAAAGTGGTTGAACTTATCCCTAATGCCGCCAGTTATCCCAACAACAAGATGACTAAGTTGGCGCGTTTGCCC TATACCAATGGCTGGCGAGTGAGCAGTAAACTCAAAGGCGACGGCTTGTGTGCCACCTCTGATACTGTGCCGCCTTGGGA CCCCGCTTTTGCTTGTTCTGCCGAAACCTCTACCAACAGTTCGCAAGTTGCGGTGCAAATTCAAAACATGCTCGCCGAGA GTGACTATAAAATATTTGGTTGGGACTTTGATTGGGGGCCAGAGGATTGGGGCGTGGCTTTTCCAGCCGAATCTATGGCC GATGGGGTTGAGCTGGTGGATAAAATCAATCAAGTGATCAACACCTGTGCGGGCACCACAATGAACCCTCTTAACAGTCG CACGCAGAACTTAGACTGTAGCGATGGTTTGCACGACGGTAAAGTGGTGATCTTGACCCACGACTTCCTGTTTGAGAATG CTCACCGTGGTCAGGGTGCGACCATCAACTTGCCTAAAATTAAACGCTTTGTGGAAGAGGCGCAGCGCCAAGGATACCGT TTCGACACGCTAGATAACTATGCCCCCGCTTGGCAGGATCAGCATGATTATCAGCAGCCTGATTTTGTCTCGTATCAAGA TAAAATCTATTCCTTAGTGCAAGCCCATTTCTCCCAAAGTAATTGGCAACCGAACCAAACCCCAGCCTTGTGGAAAAACG AGAAGTAG
Upstream 100 bases:
>100_bases CGAGCGAATGAGTGCGAGACTGTGTGCGAATTGGGATGCATGGGCGTTAACTCATTGCTTTTTAATCATTATCTTCAAAC ATTATCTATAGGATGAGATC
Downstream 100 bases:
>100_bases CTAAGTCTTGTGCTGAGTATTTACTCGGCCCATTATATTGGCCGAGTAAAGGGTATGTTGCTGAACTTAGCCTGACAAAA CTCAAAATAGCGTCACTTTT
Product: polysaccharide deacetylase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 375; Mature: 375
Protein sequence:
>375_residues MKLKSIAAAVGLCLASLSVAHASDKTIYLTFDDGPIDATLGLLDALKDANIKATFFINAFHMYGEGDENEALAAVALQRL LDDGHILANHSYDHMLHNCTDGVQSGAVYCNQVGLWPVKSYQDAATDFTYFVTNTAKVVELIPNAASYPNNKMTKLARLP YTNGWRVSSKLKGDGLCATSDTVPPWDPAFACSAETSTNSSQVAVQIQNMLAESDYKIFGWDFDWGPEDWGVAFPAESMA DGVELVDKINQVINTCAGTTMNPLNSRTQNLDCSDGLHDGKVVILTHDFLFENAHRGQGATINLPKIKRFVEEAQRQGYR FDTLDNYAPAWQDQHDYQQPDFVSYQDKIYSLVQAHFSQSNWQPNQTPALWKNEK
Sequences:
>Translated_375_residues MKLKSIAAAVGLCLASLSVAHASDKTIYLTFDDGPIDATLGLLDALKDANIKATFFINAFHMYGEGDENEALAAVALQRL LDDGHILANHSYDHMLHNCTDGVQSGAVYCNQVGLWPVKSYQDAATDFTYFVTNTAKVVELIPNAASYPNNKMTKLARLP YTNGWRVSSKLKGDGLCATSDTVPPWDPAFACSAETSTNSSQVAVQIQNMLAESDYKIFGWDFDWGPEDWGVAFPAESMA DGVELVDKINQVINTCAGTTMNPLNSRTQNLDCSDGLHDGKVVILTHDFLFENAHRGQGATINLPKIKRFVEEAQRQGYR FDTLDNYAPAWQDQHDYQQPDFVSYQDKIYSLVQAHFSQSNWQPNQTPALWKNEK >Mature_375_residues MKLKSIAAAVGLCLASLSVAHASDKTIYLTFDDGPIDATLGLLDALKDANIKATFFINAFHMYGEGDENEALAAVALQRL LDDGHILANHSYDHMLHNCTDGVQSGAVYCNQVGLWPVKSYQDAATDFTYFVTNTAKVVELIPNAASYPNNKMTKLARLP YTNGWRVSSKLKGDGLCATSDTVPPWDPAFACSAETSTNSSQVAVQIQNMLAESDYKIFGWDFDWGPEDWGVAFPAESMA DGVELVDKINQVINTCAGTTMNPLNSRTQNLDCSDGLHDGKVVILTHDFLFENAHRGQGATINLPKIKRFVEEAQRQGYR FDTLDNYAPAWQDQHDYQQPDFVSYQDKIYSLVQAHFSQSNWQPNQTPALWKNEK
Specific function: Unknown
COG id: COG0726
COG function: function code G; Predicted xylanase/chitin deacetylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41537; Mature: 41537
Theoretical pI: Translated: 4.69; Mature: 4.69
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLKSIAAAVGLCLASLSVAHASDKTIYLTFDDGPIDATLGLLDALKDANIKATFFINAF CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEE HMYGEGDENEALAAVALQRLLDDGHILANHSYDHMLHNCTDGVQSGAVYCNQVGLWPVKS EEECCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC YQDAATDFTYFVTNTAKVVELIPNAASYPNNKMTKLARLPYTNGWRVSSKLKGDGLCATS HHHHHCCEEEEEECHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCEEECC DTVPPWDPAFACSAETSTNSSQVAVQIQNMLAESDYKIFGWDFDWGPEDWGVAFPAESMA CCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCCCCCCCEECCHHHHH DGVELVDKINQVINTCAGTTMNPLNSRTQNLDCSDGLHDGKVVILTHDFLFENAHRGQGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCC TINLPKIKRFVEEAQRQGYRFDTLDNYAPAWQDQHDYQQPDFVSYQDKIYSLVQAHFSQS EEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC NWQPNQTPALWKNEK CCCCCCCCCCCCCCC >Mature Secondary Structure MKLKSIAAAVGLCLASLSVAHASDKTIYLTFDDGPIDATLGLLDALKDANIKATFFINAF CCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHCCCEEEEEEEEEE HMYGEGDENEALAAVALQRLLDDGHILANHSYDHMLHNCTDGVQSGAVYCNQVGLWPVKS EEECCCCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCC YQDAATDFTYFVTNTAKVVELIPNAASYPNNKMTKLARLPYTNGWRVSSKLKGDGLCATS HHHHHCCEEEEEECHHHHHHHCCCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCCEEECC DTVPPWDPAFACSAETSTNSSQVAVQIQNMLAESDYKIFGWDFDWGPEDWGVAFPAESMA CCCCCCCCCEEECCCCCCCCCCEEEHHHHHHHCCCCEEEEEECCCCCCCCCEECCHHHHH DGVELVDKINQVINTCAGTTMNPLNSRTQNLDCSDGLHDGKVVILTHDFLFENAHRGQGA HHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEHHHHCCCCCCCCC TINLPKIKRFVEEAQRQGYRFDTLDNYAPAWQDQHDYQQPDFVSYQDKIYSLVQAHFSQS EEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC NWQPNQTPALWKNEK CCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA