| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is cdr [H]
Identifier: 160874548
GI number: 160874548
Start: 1714200
End: 1715909
Strand: Direct
Name: cdr [H]
Synonym: Sbal195_1430
Alternate gene names: 160874548
Gene position: 1714200-1715909 (Clockwise)
Preceding gene: 160874547
Following gene: 160874549
Centisome position: 32.06
GC content: 45.44
Gene sequence:
>1710_bases ATGACTAAAATAGTGATTGTAGGCGGTGTTGCTGGTGGCGCATCTGCAGCAGCAAGAGCAAGACGTGTATCAGAAACTGC TGAAATTATCATGTTAGAGCGAGGCGAGTTTATTTCATTTGCGAACTGTGGCTTGCCTTATCATATTGGCGGTGAGATAG AGTCTAGAGAGGCCTTGTTGCTGCAAACGCCTGAAAGCTTTAAATCACGTTTTAATATTGAAGTGCGCGTGTTTAATGAT GTGATTGCAATTAATCGACAAACCAAGCAGTTAAGCATACGTAATCTGCTCACAGATGAAGTCTATCAAGAGTCATATGA TAAGTTGTTGCTAAGTCCAGGTGCCTCGCCAATCAAACCTCCAATTAGCGGCATTAATAGTCATTTTGTGCATAGCCTGC GAAATATTCCCGATATGGATAAGGTGTTAGCTAACCTTCTGCTGCATAAACCTAAGCATGCCACTGTCGTCGGTGGTGGC TTTATTGGTTTAGAGATGGCAGAAGCACTACGACATCGAGGATTAGAGGTGAGTTTACTAGAGCTTGCCGACCAAGTGAT GGGGCCGGTCGATGTTGAAATGGCCAATATACTGCATCAAAAATTAGTCGATAATGGCGTGGATTTACGTTTAAAAACAG GATTGACCGCAGTTCATGAGCGTCCTATTCAACCGGCTGAATCCGACATTACCGATGACTACGATACGCCAGTGTTTCCT CATTACCATCTACATTTAGATTTGAGTGATAACAGCAGCTTAGCTACAGATTTAGTGATCCTTGCCATAGGTGTTAAGCC TGAAACCCGCTTAGCATCTGAATGTGGTTTAACCTTAGGCAAGCTCGGTGGAATTTACGTTGACGCCAGTATGCGCACTT CTGACCCGGACATCTATGCCGTAGGCGATGCGATTGAAACTGATGATTTTGTTACAGGTAATCCAATACTTATTCCACTC GCAGGTCCCGCCAATCGTCAAGGTCGATTAGCCGCAGATAATATGCTTGGCGGCAATAAGCTGTATCGCGCCACCCAAGG TACTGCAATCTGTAAATTGTTTGATATGGCAATCGCCTCAACGGGGTTAAACGAGAAGAGTTTGCTAAGGCAAGTTATTC CGTTTGAAAAGATTTATGTGCACACCGCTAGCCATGCCAGCTATTACCCTAGAGCACATCCCATTACCCTAAAGCTGTTG TTTTGCCCTGATAACGGCCGTATTTTAGGGGCTCAAGCCGCTGGGATTGATGGCGTCGACAAACGCATTGATGTGTTAGC AGTAGCACAACGGGCAGGAATGACAGTTTATGATTTAGCCGATCTTGAACTCACTTATGCACCACCCTTTGGCTCGGCGC GTGATGTAGTGAATCAAGCCGGCATGGTGGCTGCAAACGTCTTATTAGGTGATGAATCCATTTGCCATTCTCAGGAACTA GATCATCTGACGGCTGAACAAGTCATTATCGATGTGCGCAACCCGAGCGAGCTAACGGCAGTGGGTGCCATTGTTGGTGC GATTAATATTCCGTTGCCAGTACTGAGAGACAGGCTCAATGAACTTCCTAAAGACAAAGAACTGCTCGTATTTTGCCAAG TGGGTCTGCGCGGGCATGTCGCTTATCGGATGTTAGTGCAACATGGTTTTAAGGTACGCAACCTCAGTGGTGGCTATAAA ACTTATCAAATGGTTAATGCACGTTTTTAG
Upstream 100 bases:
>100_bases CCTTAATATTTATGGTCACTGTTTTGATTGTAAGCAAAAGCTTGAGAGCAAATCGGGTAGATAGACGAAATATTATTCGT TAATTTTATTGGAGAAGAAC
Downstream 100 bases:
>100_bases TGAATAACAGCATTAAAGATGGATTTTAAAACCATTTACATCCATCAATAAATAGGTGCAGCGTGAACAATTATCAAGAT TGTAAACAAAGCCACAGCCA
Product: FAD-dependent pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: CoA-disulfide reductase; CoADR [H]
Number of amino acids: Translated: 569; Mature: 568
Protein sequence:
>569_residues MTKIVIVGGVAGGASAAARARRVSETAEIIMLERGEFISFANCGLPYHIGGEIESREALLLQTPESFKSRFNIEVRVFND VIAINRQTKQLSIRNLLTDEVYQESYDKLLLSPGASPIKPPISGINSHFVHSLRNIPDMDKVLANLLLHKPKHATVVGGG FIGLEMAEALRHRGLEVSLLELADQVMGPVDVEMANILHQKLVDNGVDLRLKTGLTAVHERPIQPAESDITDDYDTPVFP HYHLHLDLSDNSSLATDLVILAIGVKPETRLASECGLTLGKLGGIYVDASMRTSDPDIYAVGDAIETDDFVTGNPILIPL AGPANRQGRLAADNMLGGNKLYRATQGTAICKLFDMAIASTGLNEKSLLRQVIPFEKIYVHTASHASYYPRAHPITLKLL FCPDNGRILGAQAAGIDGVDKRIDVLAVAQRAGMTVYDLADLELTYAPPFGSARDVVNQAGMVAANVLLGDESICHSQEL DHLTAEQVIIDVRNPSELTAVGAIVGAINIPLPVLRDRLNELPKDKELLVFCQVGLRGHVAYRMLVQHGFKVRNLSGGYK TYQMVNARF
Sequences:
>Translated_569_residues MTKIVIVGGVAGGASAAARARRVSETAEIIMLERGEFISFANCGLPYHIGGEIESREALLLQTPESFKSRFNIEVRVFND VIAINRQTKQLSIRNLLTDEVYQESYDKLLLSPGASPIKPPISGINSHFVHSLRNIPDMDKVLANLLLHKPKHATVVGGG FIGLEMAEALRHRGLEVSLLELADQVMGPVDVEMANILHQKLVDNGVDLRLKTGLTAVHERPIQPAESDITDDYDTPVFP HYHLHLDLSDNSSLATDLVILAIGVKPETRLASECGLTLGKLGGIYVDASMRTSDPDIYAVGDAIETDDFVTGNPILIPL AGPANRQGRLAADNMLGGNKLYRATQGTAICKLFDMAIASTGLNEKSLLRQVIPFEKIYVHTASHASYYPRAHPITLKLL FCPDNGRILGAQAAGIDGVDKRIDVLAVAQRAGMTVYDLADLELTYAPPFGSARDVVNQAGMVAANVLLGDESICHSQEL DHLTAEQVIIDVRNPSELTAVGAIVGAINIPLPVLRDRLNELPKDKELLVFCQVGLRGHVAYRMLVQHGFKVRNLSGGYK TYQMVNARF >Mature_568_residues TKIVIVGGVAGGASAAARARRVSETAEIIMLERGEFISFANCGLPYHIGGEIESREALLLQTPESFKSRFNIEVRVFNDV IAINRQTKQLSIRNLLTDEVYQESYDKLLLSPGASPIKPPISGINSHFVHSLRNIPDMDKVLANLLLHKPKHATVVGGGF IGLEMAEALRHRGLEVSLLELADQVMGPVDVEMANILHQKLVDNGVDLRLKTGLTAVHERPIQPAESDITDDYDTPVFPH YHLHLDLSDNSSLATDLVILAIGVKPETRLASECGLTLGKLGGIYVDASMRTSDPDIYAVGDAIETDDFVTGNPILIPLA GPANRQGRLAADNMLGGNKLYRATQGTAICKLFDMAIASTGLNEKSLLRQVIPFEKIYVHTASHASYYPRAHPITLKLLF CPDNGRILGAQAAGIDGVDKRIDVLAVAQRAGMTVYDLADLELTYAPPFGSARDVVNQAGMVAANVLLGDESICHSQELD HLTAEQVIIDVRNPSELTAVGAIVGAINIPLPVLRDRLNELPKDKELLVFCQVGLRGHVAYRMLVQHGFKVRNLSGGYKT YQMVNARF
Specific function: Catalyzes specifically the NADPH-dependent reduction of coenzyme A disulfide [H]
COG id: COG0446
COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-III pyridine nucleotide-disulfide oxidoreductase family [H]
Homologues:
Organism=Escherichia coli, GI1789765, Length=352, Percent_Identity=27.2727272727273, Blast_Score=104, Evalue=2e-23, Organism=Escherichia coli, GI1789065, Length=375, Percent_Identity=25.0666666666667, Blast_Score=94, Evalue=2e-20, Organism=Escherichia coli, GI1786307, Length=320, Percent_Identity=25.625, Blast_Score=76, Evalue=7e-15, Organism=Escherichia coli, GI1788892, Length=303, Percent_Identity=25.4125412541254, Blast_Score=66, Evalue=5e-12, Organism=Caenorhabditis elegans, GI17559934, Length=249, Percent_Identity=24.4979919678715, Blast_Score=77, Evalue=3e-14, Organism=Drosophila melanogaster, GI24639257, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281359715, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI281359713, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24639250, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI18543267, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24639252, Length=350, Percent_Identity=26.2857142857143, Blast_Score=91, Evalue=2e-18, Organism=Drosophila melanogaster, GI24585130, Length=346, Percent_Identity=23.4104046242775, Blast_Score=70, Evalue=4e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR017758 - InterPro: IPR016156 - InterPro: IPR013027 - InterPro: IPR004099 - InterPro: IPR001327 [H]
Pfam domain/function: PF00070 Pyr_redox; PF07992 Pyr_redox_2; PF02852 Pyr_redox_dim [H]
EC number: =1.8.1.14 [H]
Molecular weight: Translated: 61861; Mature: 61730
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKIVIVGGVAGGASAAARARRVSETAEIIMLERGEFISFANCGLPYHIGGEIESREALL CCEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCEEE LQTPESFKSRFNIEVRVFNDVIAINRQTKQLSIRNLLTDEVYQESYDKLLLSPGASPIKP EECCHHHHHCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC PISGINSHFVHSLRNIPDMDKVLANLLLHKPKHATVVGGGFIGLEMAEALRHRGLEVSLL CHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEHH ELADQVMGPVDVEMANILHQKLVDNGVDLRLKTGLTAVHERPIQPAESDITDDYDTPVFP HHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCC HYHLHLDLSDNSSLATDLVILAIGVKPETRLASECGLTLGKLGGIYVDASMRTSDPDIYA EEEEEEEECCCCCHHEEEEEEEECCCCCHHHHHHHCCCHHCCCCEEEECCCCCCCCCEEE VGDAIETDDFVTGNPILIPLAGPANRQGRLAADNMLGGNKLYRATQGTAICKLFDMAIAS ECCCCCCCCEECCCCEEEECCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHH TGLNEKSLLRQVIPFEKIYVHTASHASYYPRAHPITLKLLFCPDNGRILGAQAAGIDGVD CCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCH KRIDVLAVAQRAGMTVYDLADLELTYAPPFGSARDVVNQAGMVAANVLLGDESICHSQEL HHHHHHHHHHHCCCEEEEEECEEEEECCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHH DHLTAEQVIIDVRNPSELTAVGAIVGAINIPLPVLRDRLNELPKDKELLVFCQVGLRGHV CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHH AYRMLVQHGFKVRNLSGGYKTYQMVNARF HHHHHHHCCCEEEECCCCCEEEEEEECCC >Mature Secondary Structure TKIVIVGGVAGGASAAARARRVSETAEIIMLERGEFISFANCGLPYHIGGEIESREALL CEEEEEECCCCCHHHHHHHHHHHCCEEEEEEECCCEEEEECCCCCEEECCCCCCCCEEE LQTPESFKSRFNIEVRVFNDVIAINRQTKQLSIRNLLTDEVYQESYDKLLLSPGASPIKP EECCHHHHHCEEEEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCCCCC PISGINSHFVHSLRNIPDMDKVLANLLLHKPKHATVVGGGFIGLEMAEALRHRGLEVSLL CHHCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCCEEEECCHHHHHHHHHHHHCCCEEEHH ELADQVMGPVDVEMANILHQKLVDNGVDLRLKTGLTAVHERPIQPAESDITDDYDTPVFP HHHHHHCCCCCHHHHHHHHHHHHCCCCCEEEECCCHHHHCCCCCCCCCCCCCCCCCCCCC HYHLHLDLSDNSSLATDLVILAIGVKPETRLASECGLTLGKLGGIYVDASMRTSDPDIYA EEEEEEEECCCCCHHEEEEEEEECCCCCHHHHHHHCCCHHCCCCEEEECCCCCCCCCEEE VGDAIETDDFVTGNPILIPLAGPANRQGRLAADNMLGGNKLYRATQGTAICKLFDMAIAS ECCCCCCCCEECCCCEEEECCCCCCCCCCEEECCCCCCCCEEEECCCCHHHHHHHHHHHH TGLNEKSLLRQVIPFEKIYVHTASHASYYPRAHPITLKLLFCPDNGRILGAQAAGIDGVD CCCCHHHHHHHHCCCEEEEEEECCCCCCCCCCCCEEEEEEEECCCCEEEEECCCCCCCCH KRIDVLAVAQRAGMTVYDLADLELTYAPPFGSARDVVNQAGMVAANVLLGDESICHSQEL HHHHHHHHHHHCCCEEEEEECEEEEECCCCCCHHHHHHHCCCEEEEEEECCCHHHHHHHH DHLTAEQVIIDVRNPSELTAVGAIVGAINIPLPVLRDRLNELPKDKELLVFCQVGLRGHV CCCCEEEEEEECCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCEEEEEECCCCHHH AYRMLVQHGFKVRNLSGGYKTYQMVNARF HHHHHHHCCCEEEECCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA