| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is lutA [H]
Identifier: 160874493
GI number: 160874493
Start: 1645477
End: 1646220
Strand: Reverse
Name: lutA [H]
Synonym: Sbal195_1375
Alternate gene names: 160874493
Gene position: 1646220-1645477 (Counterclockwise)
Preceding gene: 160874494
Following gene: 160874492
Centisome position: 30.79
GC content: 52.15
Gene sequence:
>744_bases ATGAAAATCGCCCTTTTCATCCCGTGTCTAGTCAATCAAATGATGCCAGAGGTTGCTATTGCCACCTTGGAATTATTAGA GAAACTTGGGCACCAAGTGATTCTACCTGCGGGTCAAACATGCTGTGGCCAGCCGATGACAAACTCAGGTTGCTTCGATG CAGCGCGCAGTACCACCCTTAAATTGCTCAACGCCTTTAAGGGAGTGGAATGCGACGCTATTGTTTGCCCAGCCGCCTCT TGCTTAGTGGCCGCCAAAGAAAACTTCCACGAGTTTGATAGCAGCCCTGAAGCGCAAGCTGTGATCAACAAGCTCTATGA ACTGACAGAGTTTTTACACGATATCGCGCCGATCCCCGCCTTTACCAAGCCCTTCGCGCACAAGGTAAGCCTGCAACTGA GTTGCCATGGTATTCGCATGTTAAGCCTTGCGACACCAAGCGAGCAGATGGGGCCAAGATTTAACAAAGTCGAAGCCGTG CTCGCCAATATTGCGGGTATAGACATAGTCTATCCCGACCGTCGTGACGAATGCTGTGGCTTTGGCGGTACGTTCGCCGT CGATGAGGGCGCAGTGTCAGCCAAAATGGGCAAAGACAAGGCCCAAGCCCACGCGGCAACGGGTGCAGAGTATGTCGTAG GTTTTGATCCTTCATGCCTGTTGCACCTCGATGGCATGATCCGCAGACAGCAATTGCCGATTGAAATTCGCCACATAGCG CAAGTGCTGAACGCCGCGCTTTAG
Upstream 100 bases:
>100_bases TTAGATAGGCCTATATTTGATCAACTACCTTAGCATTTGTGTGGACTTTGGGGGCACAATGCAAGGCAATGTCGTTCACT AACAAGAAAGAGAAAACACA
Downstream 100 bases:
>100_bases GAGACTCACCATGGCTTACAATCATAATCACGATGCTAGTCAAGGCTCACAGGTCCATGCCCATAAAGCCGATATTTTTT GCCGCGACGAAACCCGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 247; Mature: 247
Protein sequence:
>247_residues MKIALFIPCLVNQMMPEVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTLKLLNAFKGVECDAIVCPAAS CLVAAKENFHEFDSSPEAQAVINKLYELTEFLHDIAPIPAFTKPFAHKVSLQLSCHGIRMLSLATPSEQMGPRFNKVEAV LANIAGIDIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAEYVVGFDPSCLLHLDGMIRRQQLPIEIRHIA QVLNAAL
Sequences:
>Translated_247_residues MKIALFIPCLVNQMMPEVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTLKLLNAFKGVECDAIVCPAAS CLVAAKENFHEFDSSPEAQAVINKLYELTEFLHDIAPIPAFTKPFAHKVSLQLSCHGIRMLSLATPSEQMGPRFNKVEAV LANIAGIDIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAEYVVGFDPSCLLHLDGMIRRQQLPIEIRHIA QVLNAAL >Mature_247_residues MKIALFIPCLVNQMMPEVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTLKLLNAFKGVECDAIVCPAAS CLVAAKENFHEFDSSPEAQAVINKLYELTEFLHDIAPIPAFTKPFAHKVSLQLSCHGIRMLSLATPSEQMGPRFNKVEAV LANIAGIDIVYPDRRDECCGFGGTFAVDEGAVSAKMGKDKAQAHAATGAEYVVGFDPSCLLHLDGMIRRQQLPIEIRHIA QVLNAAL
Specific function: Is involved in L-lactate degradation and allows cells to grow with lactate as the sole carbon source [H]
COG id: COG0247
COG function: function code C; Fe-S oxidoreductase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the lutA/ykgE family [H]
Homologues:
Organism=Escherichia coli, GI1786497, Length=247, Percent_Identity=30.3643724696356, Blast_Score=118, Evalue=5e-28,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004017 - InterPro: IPR022822 [H]
Pfam domain/function: PF02754 CCG [H]
EC number: NA
Molecular weight: Translated: 26609; Mature: 26609
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 7.7 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 7.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKIALFIPCLVNQMMPEVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTL CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH KLLNAFKGVECDAIVCPAASCLVAAKENFHEFDSSPEAQAVINKLYELTEFLHDIAPIPA HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FTKPFAHKVSLQLSCHGIRMLSLATPSEQMGPRFNKVEAVLANIAGIDIVYPDRRDECCG CCCCHHHHEEEEEEECCEEEEEECCCHHHHCCCHHHHHHHHHHHCCCEEECCCCCCHHCC FGGTFAVDEGAVSAKMGKDKAQAHAATGAEYVVGFDPSCLLHLDGMIRRQQLPIEIRHIA CCCCEEECCCCHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHH QVLNAAL HHHHHCC >Mature Secondary Structure MKIALFIPCLVNQMMPEVAIATLELLEKLGHQVILPAGQTCCGQPMTNSGCFDAARSTTL CEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCHHHHHHHHHH KLLNAFKGVECDAIVCPAASCLVAAKENFHEFDSSPEAQAVINKLYELTEFLHDIAPIPA HHHHHHCCCCCCEEECCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCC FTKPFAHKVSLQLSCHGIRMLSLATPSEQMGPRFNKVEAVLANIAGIDIVYPDRRDECCG CCCCHHHHEEEEEEECCEEEEEECCCHHHHCCCHHHHHHHHHHHCCCEEECCCCCCHHCC FGGTFAVDEGAVSAKMGKDKAQAHAATGAEYVVGFDPSCLLHLDGMIRRQQLPIEIRHIA CCCCEEECCCCHHHHCCCHHHHHHHCCCCCEEEECCCHHHHHHHHHHHHHCCCHHHHHHH QVLNAAL HHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12235376 [H]