| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874432
Identifier: 160874432
GI number: 160874432
Start: 1555455
End: 1557182
Strand: Reverse
Name: 160874432
Synonym: Sbal195_1313
Alternate gene names: NA
Gene position: 1557182-1555455 (Counterclockwise)
Preceding gene: 160874433
Following gene: 160874431
Centisome position: 29.12
GC content: 49.25
Gene sequence:
>1728_bases TTGGTTTGCTTCAGGTGTGTGGACAGTAAGATGAAAGAGACATTTTTTAGAACCTTATCTTGGCTACATACTTGGGCAGG CTTGCTCGTGTGCTGGGTGTTATTGTTGATCTTTTTTGCGGGTAGCTTGAGCTATTTCCGCCATGAAATCAGCCTTTGGA ACGAACCCGAATTACACCAAGGGGTTTATCAAGACTATCAAGCCGATACGCTCGCAAATCAGCTGGATAAAGGCCAAGAT TATATCGCAGCGCATTCGCCCGAATCGGCGCAGCGCTGGATGATAGGTTTTCCGACCGAACGTAAGCCCTTTCAAAGTGT GAGTTGGCAATTGCCACCAGAAAAAGGTCAACGTCGCGGCAAAACAGAAGAACATGTGGCCCTCGCCGATGGCAGCGGCA TGATCTCAGAAGTGCGCGCAAGTCGTGGCGGCGATTTCTTCTATCGTCTGCATTTTGACTTGCATTATATGTCCGCAATT ACAGCCCGATATATCGTCGGCGTTTGTACTATGTTTATGCTAATTGCCCTTATCAGCGGCATAGTGATCCACAAGCGGAT CTTTAAGGATATGTTCAGCTTTAGACGCGACAAGGGCGCCCGCTCTTGGTTAGATGCACACAATGTGAGCTCTGTCATCG CCCTGCCCTACCATCTGATGATCACTTATACCGGGCTTATCACCCTGATGTTGATCTATATTCCGTGGACGGTGGATACC GCCTATTCGGGTGACAACCAAGCCTTTTTAAAAGAGCTAAACCCCGCCAGACAAACCGAGAAAGCCACGGGGATTAGCGC GCCACAGGTGCAGCTGAGTCAATTACTGCCGCAGGTGCAAGCCGCTTGGGGCGATGCGCCAATTAAGCAAGTGATAGTCT CATACCCTAACGATCAAAATAGCCAAGTGACCTTTTACCAAAACACAGGTAAAGATGTGACCGATGAGGCCAACATTTTG ATATTTAACGGGGTCAATGGTGAGCTTAAGTATGCCAGCCCGCATGAAGCCTCGGGGGCGTCAGTCACCTACGACACTAT GATGTCGCTACACACGGCGCGTTTTGCCGCCCCACTATTACGAATATTATTCTTTTTCTGCGGCTTATTAGGTTGCGCTA TGGTCGCTACAGGCACTTTGATGTGGGCCATTCGCCTACGTCAAAAACAACAGAAAGCTATAGATAAAGGCGAGAAACCA AGCTTGGGATTACGTCTCGTCGAAGGGTTAAACTTCATGTTTATCTTAGGATTACCCTTAGGCGCTGTGAGCTTCTTTTA CGCAAATCGTCTGCTATCGACAAGTTTTGCAGGCCGCTCCGAATGGGAAGTTCACAGCTTCTTTATCGCGTTAGCGGCAA TGGGAGTGTGGGCTTTCTTTGGCCGTTCACGTCGCCAGTGGCAAGCAGCATTGATAATCACAGGCAGTTTGTGCTGTGCA CTGCCCGTGCTCAATGCCTTCACATCGCCGAGCAATCTCATCGATAATATCCAATCCCATCAATGGCCTTTAGTCGGATT TGACGTGCTCGCCATTCTACTTGGCGGCGCTATGCTATTTGCCAGCAAAAGATTAACTTTAATTGCTAAAGCCCCAGCCA AGCGCCCAGCAAGACCCGCATTCAATGCGCCGAATACCAAGGCGAATAAAGCACGCCGCAGCGAGCCACAAACATCCCTA GCCAACGAACTTACCTCGCCGTCTTCATTGGAGGAAGCCAAATCATGA
Upstream 100 bases:
>100_bases TTGGCTTTTCTGTTTTATGCCATCGCCATTATTTACGCCTTTTGTGTACGTAAAACCTGGCATGCATGGCGAGATCTAGG CCTAGTGAGTTTGTTATGTT
Downstream 100 bases:
>100_bases TGCCAGAATTTATCCCTGTACTTGGGATCTTAGGCTTAAGTTATCTCTCACTGGCCCTATTCGCCTTAGCTAAGTTTGGC CATTTTAAGGATGTGTTTAA
Product: PepSY-associated TM helix domain-containing protein
Products: NA
Alternate protein names: PepSY-Associated TM Helix; Iron-Regulated Membrane Protein; PepSY-Associated TM Helix Domain Protein; PepSY-Associated TM Helix Family; Aspartate Kinase; PepSY-Associated Membrane Protein; Transmembrane Protein; PepSY-Associated TM Helix Family Protein; Iron Uptake Protein; Iron-Regulated Membrane Protein DUF; Transmembrane PepSY Domain-Containing Protein; PepSY Domain Protein; Pepsy-Associated Tm Helix DomaiN-Containing Protein; Iron Regulated Protein; Pepsy-Associated Tm Helix Domain Protein; Response Regulator Receiver Protein
Number of amino acids: Translated: 575; Mature: 575
Protein sequence:
>575_residues MVCFRCVDSKMKETFFRTLSWLHTWAGLLVCWVLLLIFFAGSLSYFRHEISLWNEPELHQGVYQDYQADTLANQLDKGQD YIAAHSPESAQRWMIGFPTERKPFQSVSWQLPPEKGQRRGKTEEHVALADGSGMISEVRASRGGDFFYRLHFDLHYMSAI TARYIVGVCTMFMLIALISGIVIHKRIFKDMFSFRRDKGARSWLDAHNVSSVIALPYHLMITYTGLITLMLIYIPWTVDT AYSGDNQAFLKELNPARQTEKATGISAPQVQLSQLLPQVQAAWGDAPIKQVIVSYPNDQNSQVTFYQNTGKDVTDEANIL IFNGVNGELKYASPHEASGASVTYDTMMSLHTARFAAPLLRILFFFCGLLGCAMVATGTLMWAIRLRQKQQKAIDKGEKP SLGLRLVEGLNFMFILGLPLGAVSFFYANRLLSTSFAGRSEWEVHSFFIALAAMGVWAFFGRSRRQWQAALIITGSLCCA LPVLNAFTSPSNLIDNIQSHQWPLVGFDVLAILLGGAMLFASKRLTLIAKAPAKRPARPAFNAPNTKANKARRSEPQTSL ANELTSPSSLEEAKS
Sequences:
>Translated_575_residues MVCFRCVDSKMKETFFRTLSWLHTWAGLLVCWVLLLIFFAGSLSYFRHEISLWNEPELHQGVYQDYQADTLANQLDKGQD YIAAHSPESAQRWMIGFPTERKPFQSVSWQLPPEKGQRRGKTEEHVALADGSGMISEVRASRGGDFFYRLHFDLHYMSAI TARYIVGVCTMFMLIALISGIVIHKRIFKDMFSFRRDKGARSWLDAHNVSSVIALPYHLMITYTGLITLMLIYIPWTVDT AYSGDNQAFLKELNPARQTEKATGISAPQVQLSQLLPQVQAAWGDAPIKQVIVSYPNDQNSQVTFYQNTGKDVTDEANIL IFNGVNGELKYASPHEASGASVTYDTMMSLHTARFAAPLLRILFFFCGLLGCAMVATGTLMWAIRLRQKQQKAIDKGEKP SLGLRLVEGLNFMFILGLPLGAVSFFYANRLLSTSFAGRSEWEVHSFFIALAAMGVWAFFGRSRRQWQAALIITGSLCCA LPVLNAFTSPSNLIDNIQSHQWPLVGFDVLAILLGGAMLFASKRLTLIAKAPAKRPARPAFNAPNTKANKARRSEPQTSL ANELTSPSSLEEAKS >Mature_575_residues MVCFRCVDSKMKETFFRTLSWLHTWAGLLVCWVLLLIFFAGSLSYFRHEISLWNEPELHQGVYQDYQADTLANQLDKGQD YIAAHSPESAQRWMIGFPTERKPFQSVSWQLPPEKGQRRGKTEEHVALADGSGMISEVRASRGGDFFYRLHFDLHYMSAI TARYIVGVCTMFMLIALISGIVIHKRIFKDMFSFRRDKGARSWLDAHNVSSVIALPYHLMITYTGLITLMLIYIPWTVDT AYSGDNQAFLKELNPARQTEKATGISAPQVQLSQLLPQVQAAWGDAPIKQVIVSYPNDQNSQVTFYQNTGKDVTDEANIL IFNGVNGELKYASPHEASGASVTYDTMMSLHTARFAAPLLRILFFFCGLLGCAMVATGTLMWAIRLRQKQQKAIDKGEKP SLGLRLVEGLNFMFILGLPLGAVSFFYANRLLSTSFAGRSEWEVHSFFIALAAMGVWAFFGRSRRQWQAALIITGSLCCA LPVLNAFTSPSNLIDNIQSHQWPLVGFDVLAILLGGAMLFASKRLTLIAKAPAKRPARPAFNAPNTKANKARRSEPQTSL ANELTSPSSLEEAKS
Specific function: Unknown
COG id: COG3182
COG function: function code S; Uncharacterized iron-regulated membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 64269; Mature: 64269
Theoretical pI: Translated: 9.34; Mature: 9.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVCFRCVDSKMKETFFRTLSWLHTWAGLLVCWVLLLIFFAGSLSYFRHEISLWNEPELHQ CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHH GVYQDYQADTLANQLDKGQDYIAAHSPESAQRWMIGFPTERKPFQSVSWQLPPEKGQRRG HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHCCC KTEEHVALADGSGMISEVRASRGGDFFYRLHFDLHYMSAITARYIVGVCTMFMLIALISG CCHHCEEEECCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVIHKRIFKDMFSFRRDKGARSWLDAHNVSSVIALPYHLMITYTGLITLMLIYIPWTVDT HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC AYSGDNQAFLKELNPARQTEKATGISAPQVQLSQLLPQVQAAWGDAPIKQVIVSYPNDQN CCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC SQVTFYQNTGKDVTDEANILIFNGVNGELKYASPHEASGASVTYDTMMSLHTARFAAPLL CEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH RILFFFCGLLGCAMVATGTLMWAIRLRQKQQKAIDKGEKPSLGLRLVEGLNFMFILGLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEHHCHH GAVSFFYANRLLSTSFAGRSEWEVHSFFIALAAMGVWAFFGRSRRQWQAALIITGSLCCA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEHHHHHH LPVLNAFTSPSNLIDNIQSHQWPLVGFDVLAILLGGAMLFASKRLTLIAKAPAKRPARPA HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC FNAPNTKANKARRSEPQTSLANELTSPSSLEEAKS CCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHCC >Mature Secondary Structure MVCFRCVDSKMKETFFRTLSWLHTWAGLLVCWVLLLIFFAGSLSYFRHEISLWNEPELHQ CEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCCHHHH GVYQDYQADTLANQLDKGQDYIAAHSPESAQRWMIGFPTERKPFQSVSWQLPPEKGQRRG HHHHHHHHHHHHHHHHCCCCEEECCCCCCCCCEEEECCCCCCCHHCCCCCCCCHHHHCCC KTEEHVALADGSGMISEVRASRGGDFFYRLHFDLHYMSAITARYIVGVCTMFMLIALISG CCHHCEEEECCCCHHHHHHHCCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHH IVIHKRIFKDMFSFRRDKGARSWLDAHNVSSVIALPYHLMITYTGLITLMLIYIPWTVDT HHHHHHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEC AYSGDNQAFLKELNPARQTEKATGISAPQVQLSQLLPQVQAAWGDAPIKQVIVSYPNDQN CCCCCCHHHHHHCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHCCCCCCC SQVTFYQNTGKDVTDEANILIFNGVNGELKYASPHEASGASVTYDTMMSLHTARFAAPLL CEEEEEECCCCCCCCCCCEEEEECCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHH RILFFFCGLLGCAMVATGTLMWAIRLRQKQQKAIDKGEKPSLGLRLVEGLNFMFILGLPL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHCCCEEEEHHCHH GAVSFFYANRLLSTSFAGRSEWEVHSFFIALAAMGVWAFFGRSRRQWQAALIITGSLCCA HHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHEEEEEEEHHHHHH LPVLNAFTSPSNLIDNIQSHQWPLVGFDVLAILLGGAMLFASKRLTLIAKAPAKRPARPA HHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCC FNAPNTKANKARRSEPQTSLANELTSPSSLEEAKS CCCCCCCHHHHHCCCCHHHHHHHCCCCCHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA