Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is puuB [H]
Identifier: 160874314
GI number: 160874314
Start: 1416940
End: 1418247
Strand: Reverse
Name: puuB [H]
Synonym: Sbal195_1194
Alternate gene names: 160874314
Gene position: 1418247-1416940 (Counterclockwise)
Preceding gene: 160874325
Following gene: 160874308
Centisome position: 26.52
GC content: 49.62
Gene sequence:
>1308_bases ATGGCAAGCAAACCTCCAGTGCACAGCGAACAGTACCCACACTCTTATTATGTTGATACTGCTAAAGAAATTTACGCGCA CCCACAACTCGAAGGCAATATCAGTGCCGATGTCTGCATAGTAGGCGGCGGCTTTAGCGGTATCAATACCGCCATAGAAC TCGCACAGCGCGGCATGAGTGTCGTCCTATTAGAAGCCAAGCGCATTGGCTGGGGCGCATCGGGGCGAAACGGCGGCGAA CTCATTCGCGGCATAGGCCATGACCCTTCGCAATTTCACAGTGAAATAGGCACTGAAGGTGTTCAAGCAATTCAACAGAT GGGCTTTGAAGCCGTCGAAATTGTGCGAAATCGCATACAAGAACACAGTATCGACTGCGATCTGCAAATGGGTTATTGCG ATTTGGCAGTTAAACCTCGCCACATGGATGAGCTTGAAGAAGAATTTAGCGCACTCAAAGCCATGGGTTATCAGCAAGAA ATCAAGCTGTTAACTAAGCCACAATTAGGTGAAGTCATAGGCTCAGATTTTTATCAAGGTGCGCTGGTCGATATGGGCAG CGGCCATTTACACCCGCTGAATCTTGCTCTGGGTGAGGCACGCGTCGCCCGTAATCTGGGCGTGCAGTTGTTTGAATACA GCGCCGCCGAAAAAATCATTCAAGGCGCTAAACCTAAGGTCATGACCGCCAAGGGCGAAGTCACTTGCCAATACTTAGTT CTGGCTGGCAATGCGTATATTGGCCACAAACTTAACAGTTTTGTTGGGGGTAAAGTATTACCCGCCGGCAGTTATTTATT GGCGACCGAGCCCTTAACTGAGGCCCAATGCGCGAGCATTATCCCGCAAAATATGGCCTTCGCCGATATGCGAATTGCCT TAGATTACTTTCACTTATCCGCAGATCGTCGACTGCTGTTTGGTGGCCTTTGTACTTATTCGGGTAAAGATCCCAAGGAT ATTGAAGCAGCACTGAGACCGAATCTGGAGAAGGTTTTTCCACAGTTAAAAGGCGTGCGCATCGATTATGAATGGGGCGG CATGATAGGTATTGGGGCTAACCGTATGCCACAAATTGGTCGCGTGCCCGATGCCAATAATATTTTCTACGCCCAAGCCT ATGCAGGACATGGGGTGAATGCCACTCACATGGCGGCAAAACTACTGGCCGAGGCTATTTGCCAACAGGCGGGACACTTC GATGTGTTCGCTAAAATCAAACACATGACCTTCCCCGGCGGCCCGACATTCCGCTCACCTATGCTCGCGGCTGGCATGCT GTATCACAGATTTAAAGACTTGTTTTAA
Upstream 100 bases:
>100_bases GTGTTAAATAAAACGAACACTTTTTTGCGTCATGTTAAAAGTGTGATGAGTATACTGAGACAAGTCCAATTTACAATAAA AACAATTTTTTGGAGCCATA
Downstream 100 bases:
>100_bases AAGCTTATTTAAAGCACTTTTTAAAGAACAGATTTTAAAGGCTGGTTTTAAGAACTGGTTTTAAGCCATAACGCATGATG CCCATCGGATAAACAATCCG
Product: FAD dependent oxidoreductase
Products: NA
Alternate protein names: Gamma-Glu-Put oxidase; Gamma-glutamylputrescine oxidase [H]
Number of amino acids: Translated: 435; Mature: 434
Protein sequence:
>435_residues MASKPPVHSEQYPHSYYVDTAKEIYAHPQLEGNISADVCIVGGGFSGINTAIELAQRGMSVVLLEAKRIGWGASGRNGGE LIRGIGHDPSQFHSEIGTEGVQAIQQMGFEAVEIVRNRIQEHSIDCDLQMGYCDLAVKPRHMDELEEEFSALKAMGYQQE IKLLTKPQLGEVIGSDFYQGALVDMGSGHLHPLNLALGEARVARNLGVQLFEYSAAEKIIQGAKPKVMTAKGEVTCQYLV LAGNAYIGHKLNSFVGGKVLPAGSYLLATEPLTEAQCASIIPQNMAFADMRIALDYFHLSADRRLLFGGLCTYSGKDPKD IEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRVPDANNIFYAQAYAGHGVNATHMAAKLLAEAICQQAGHF DVFAKIKHMTFPGGPTFRSPMLAAGMLYHRFKDLF
Sequences:
>Translated_435_residues MASKPPVHSEQYPHSYYVDTAKEIYAHPQLEGNISADVCIVGGGFSGINTAIELAQRGMSVVLLEAKRIGWGASGRNGGE LIRGIGHDPSQFHSEIGTEGVQAIQQMGFEAVEIVRNRIQEHSIDCDLQMGYCDLAVKPRHMDELEEEFSALKAMGYQQE IKLLTKPQLGEVIGSDFYQGALVDMGSGHLHPLNLALGEARVARNLGVQLFEYSAAEKIIQGAKPKVMTAKGEVTCQYLV LAGNAYIGHKLNSFVGGKVLPAGSYLLATEPLTEAQCASIIPQNMAFADMRIALDYFHLSADRRLLFGGLCTYSGKDPKD IEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRVPDANNIFYAQAYAGHGVNATHMAAKLLAEAICQQAGHF DVFAKIKHMTFPGGPTFRSPMLAAGMLYHRFKDLF >Mature_434_residues ASKPPVHSEQYPHSYYVDTAKEIYAHPQLEGNISADVCIVGGGFSGINTAIELAQRGMSVVLLEAKRIGWGASGRNGGEL IRGIGHDPSQFHSEIGTEGVQAIQQMGFEAVEIVRNRIQEHSIDCDLQMGYCDLAVKPRHMDELEEEFSALKAMGYQQEI KLLTKPQLGEVIGSDFYQGALVDMGSGHLHPLNLALGEARVARNLGVQLFEYSAAEKIIQGAKPKVMTAKGEVTCQYLVL AGNAYIGHKLNSFVGGKVLPAGSYLLATEPLTEAQCASIIPQNMAFADMRIALDYFHLSADRRLLFGGLCTYSGKDPKDI EAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIGRVPDANNIFYAQAYAGHGVNATHMAAKLLAEAICQQAGHFD VFAKIKHMTFPGGPTFRSPMLAAGMLYHRFKDLF
Specific function: Involved in the breakdown of putrescine via the oxidation of L-glutamylputrescine [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Escherichia coli, GI1787559, Length=423, Percent_Identity=41.8439716312057, Blast_Score=352, Evalue=4e-98,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006076 [H]
Pfam domain/function: PF01266 DAO [H]
EC number: 1.-.-.- [C]
Molecular weight: Translated: 47428; Mature: 47297
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASKPPVHSEQYPHSYYVDTAKEIYAHPQLEGNISADVCIVGGGFSGINTAIELAQRGMS CCCCCCCCCCCCCCCEEHHCHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCE VVLLEAKRIGWGASGRNGGELIRGIGHDPSQFHSEIGTEGVQAIQQMGFEAVEIVRNRIQ EEEEEEHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHH EHSIDCDLQMGYCDLAVKPRHMDELEEEFSALKAMGYQQEIKLLTKPQLGEVIGSDFYQG HCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCHHHCC ALVDMGSGHLHPLNLALGEARVARNLGVQLFEYSAAEKIIQGAKPKVMTAKGEVTCQYLV CEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEE LAGNAYIGHKLNSFVGGKVLPAGSYLLATEPLTEAQCASIIPQNMAFADMRIALDYFHLS EECCCCCCCHHHHHCCCEEECCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC ADRRLLFGGLCTYSGKDPKDIEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIG CCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCEEEEEECCCEEEECCCCCCCCC RVPDANNIFYAQAYAGHGVNATHMAAKLLAEAICQQAGHFDVFAKIKHMTFPGGPTFRSP CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHEEHEECCCCCCCCCH MLAAGMLYHRFKDLF HHHHHHHHHHHHHCC >Mature Secondary Structure ASKPPVHSEQYPHSYYVDTAKEIYAHPQLEGNISADVCIVGGGFSGINTAIELAQRGMS CCCCCCCCCCCCCCEEHHCHHHHHCCCCCCCCCCCCEEEEECCCHHHHHHHHHHHCCCE VVLLEAKRIGWGASGRNGGELIRGIGHDPSQFHSEIGTEGVQAIQQMGFEAVEIVRNRIQ EEEEEEHHCCCCCCCCCHHHHHHCCCCCHHHHHHHHCHHHHHHHHHCCHHHHHHHHHHHH EHSIDCDLQMGYCDLAVKPRHMDELEEEFSALKAMGYQQEIKLLTKPQLGEVIGSDFYQG HCCCCCEEEECEEEEEECCCHHHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHCCHHHCC ALVDMGSGHLHPLNLALGEARVARNLGVQLFEYSAAEKIIQGAKPKVMTAKGEVTCQYLV CEEECCCCCCEEEHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEE LAGNAYIGHKLNSFVGGKVLPAGSYLLATEPLTEAQCASIIPQNMAFADMRIALDYFHLS EECCCCCCCHHHHHCCCEEECCCCEEEEECCCCHHHHHHHCCCCHHHHHHHHHHHHHHHC ADRRLLFGGLCTYSGKDPKDIEAALRPNLEKVFPQLKGVRIDYEWGGMIGIGANRMPQIG CCCEEEEEEEEECCCCCHHHHHHHHCCCHHHHHHHHCCEEEEEECCCEEEECCCCCCCCC RVPDANNIFYAQAYAGHGVNATHMAAKLLAEAICQQAGHFDVFAKIKHMTFPGGPTFRSP CCCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCEEEEEHEEHEECCCCCCCCCH MLAAGMLYHRFKDLF HHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9097039; 9278503; 1840553; 7984428 [H]