| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874270
Identifier: 160874270
GI number: 160874270
Start: 1364424
End: 1365830
Strand: Reverse
Name: 160874270
Synonym: Sbal195_1150
Alternate gene names: NA
Gene position: 1365830-1364424 (Counterclockwise)
Preceding gene: 160874272
Following gene: 160874267
Centisome position: 25.54
GC content: 47.83
Gene sequence:
>1407_bases ATGAAGCCCTATCAAACAACACTTCTCTCGAGTCTTTTAATCGGGAGTTTAAGTGCGTGCCAAACTCAAGTAGAAACAGC TCCGACAAGTGAAGTCATTAAATTACAACAGACAGCATTAGCTTCACAATTAGGTTATGACATAGTCGAATCTCTCACGG TTGAAGTAGGTCCAAGACTAGCTGGAAGCCCAAAAGATATCATCGCCGTTAACTGGGCGATAAATAAACTGACCAGCCTT GGATTTGACCGCGTTTATAAAGAACCAGTACAAGTACCCATTTGGGAACGCGGTGAAGCCAAAGCTAAAATAACCTTCCC TGTCGAGCAGCCGCTGGTCATTACTGCGCTTGGTGGCAGCATTGCGACACCAGCAGGCGGTATACAAGCTAAAATCGAAC GTTTTGATAGCCTAGAGGCACTACAACAAGCCAAGCCTGAAGACGTGCAAGGTAAGATTGCGTTTATTGACCAAAAAACC GAGCGCCACATTACTGGTGAAGGCTATGGCAAAAGCGTTGGCGGCCGCTCAAAAGGTGCCGTCGCAGCAGCGCAAAAAGG CGCAGTTGCTATCGTGATCCGCTCTATTGGCACAGATCATGACCGCATGGCCCATACAGGTGTTATGCGCTACCAAGATG ACGTGCCTAAGATCCCTGCGGCAGCCATGTCAAACCCTGATGCCGATTTGGTCGATGCATTACTAAAACGCAATCCTGAT GCTCTACTTGAGTTGCAGATGTCACCAAAAAACGCCGGCTTTAATACATCTTACAATGTCATTGCCGAAGTAACTGGCAG CAGTAAGTCCAATGAAATCGTGCTCATTGGCGCTCATTTAGATTCTTGGGATGAAGGTACAGGTGCAATTGATGATGGGG CGGGTGTCGCGATAGTGACGGCTGCAGCCAAGCACATTCAAGATCTTCCAGTAAAACCCGCTCGTACTGTCAGAGTGGTG CTATATGCCGCTGAAGAAATAGGGCTTGTGGGCGGTAAAGCCTATGCTGAAGCTCATAAAGCGGAATTACCATTGCACTA CATAGCTGCGGAATCCGATTTTGGGGCGGGCCGAATTTATCAAATCGATACTAAGGTTAATGAGAGCGCATTTGCAGAGG TACAGCAAGCACTCAGCCCTATGTCATTCAATGGTGTCGCACTCGGCAGCAACCAAGCTTCTGGCGGGCCTGACGTGTCT ATGCTGCCAGCCCTAGGCGTACCAGTTGCATCATTAAGGCAAGATGGTCACGATTACTTCGATTACCATCACACACCGAA TGATACCTTAGATAAAATTGACCCCGCCGCATTGGCTCAAAACGTCGCCGCCTACGCACAATTTGCTTATATCATGGCAA ATTCAACCGCGACATTAACACCTTTAGTCATTCAGTCTGAAAAATAG
Upstream 100 bases:
>100_bases ATATAGCGTCGCCTTACGGATATAGTCGGGACATAAAGCACACTTTTTGCTAGATTGTTTTTAAAAATGGGACATGCTTA ATAAAAATAAAGGAAATCTA
Downstream 100 bases:
>100_bases ATAATCGACAAAATAATAGAGAGAACAGCATAAGCTGTTCTCTATCAATTAACATCTTATCGATATTTCGCTATTGCTCT GCACGTAAAAATGTTGGATT
Product: peptidase M28
Products: NA
Alternate protein names: Peptidase; Aminopeptidase; M28 Family Peptidase; M28D Family Peptidase; Metalloprotease II; Peptidase Family; Endoribonuclease L-PSP; Peptidase Family M
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MKPYQTTLLSSLLIGSLSACQTQVETAPTSEVIKLQQTALASQLGYDIVESLTVEVGPRLAGSPKDIIAVNWAINKLTSL GFDRVYKEPVQVPIWERGEAKAKITFPVEQPLVITALGGSIATPAGGIQAKIERFDSLEALQQAKPEDVQGKIAFIDQKT ERHITGEGYGKSVGGRSKGAVAAAQKGAVAIVIRSIGTDHDRMAHTGVMRYQDDVPKIPAAAMSNPDADLVDALLKRNPD ALLELQMSPKNAGFNTSYNVIAEVTGSSKSNEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHIQDLPVKPARTVRVV LYAAEEIGLVGGKAYAEAHKAELPLHYIAAESDFGAGRIYQIDTKVNESAFAEVQQALSPMSFNGVALGSNQASGGPDVS MLPALGVPVASLRQDGHDYFDYHHTPNDTLDKIDPAALAQNVAAYAQFAYIMANSTATLTPLVIQSEK
Sequences:
>Translated_468_residues MKPYQTTLLSSLLIGSLSACQTQVETAPTSEVIKLQQTALASQLGYDIVESLTVEVGPRLAGSPKDIIAVNWAINKLTSL GFDRVYKEPVQVPIWERGEAKAKITFPVEQPLVITALGGSIATPAGGIQAKIERFDSLEALQQAKPEDVQGKIAFIDQKT ERHITGEGYGKSVGGRSKGAVAAAQKGAVAIVIRSIGTDHDRMAHTGVMRYQDDVPKIPAAAMSNPDADLVDALLKRNPD ALLELQMSPKNAGFNTSYNVIAEVTGSSKSNEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHIQDLPVKPARTVRVV LYAAEEIGLVGGKAYAEAHKAELPLHYIAAESDFGAGRIYQIDTKVNESAFAEVQQALSPMSFNGVALGSNQASGGPDVS MLPALGVPVASLRQDGHDYFDYHHTPNDTLDKIDPAALAQNVAAYAQFAYIMANSTATLTPLVIQSEK >Mature_468_residues MKPYQTTLLSSLLIGSLSACQTQVETAPTSEVIKLQQTALASQLGYDIVESLTVEVGPRLAGSPKDIIAVNWAINKLTSL GFDRVYKEPVQVPIWERGEAKAKITFPVEQPLVITALGGSIATPAGGIQAKIERFDSLEALQQAKPEDVQGKIAFIDQKT ERHITGEGYGKSVGGRSKGAVAAAQKGAVAIVIRSIGTDHDRMAHTGVMRYQDDVPKIPAAAMSNPDADLVDALLKRNPD ALLELQMSPKNAGFNTSYNVIAEVTGSSKSNEIVLIGAHLDSWDEGTGAIDDGAGVAIVTAAAKHIQDLPVKPARTVRVV LYAAEEIGLVGGKAYAEAHKAELPLHYIAAESDFGAGRIYQIDTKVNESAFAEVQQALSPMSFNGVALGSNQASGGPDVS MLPALGVPVASLRQDGHDYFDYHHTPNDTLDKIDPAALAQNVAAYAQFAYIMANSTATLTPLVIQSEK
Specific function: Unknown
COG id: COG2234
COG function: function code R; Predicted aminopeptidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI7706387, Length=410, Percent_Identity=35.8536585365854, Blast_Score=238, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 49562; Mature: 49562
Theoretical pI: Translated: 5.06; Mature: 5.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPYQTTLLSSLLIGSLSACQTQVETAPTSEVIKLQQTALASQLGYDIVESLTVEVGPRL CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC AGSPKDIIAVNWAINKLTSLGFDRVYKEPVQVPIWERGEAKAKITFPVEQPLVITALGGS CCCCCCEEEEEHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCC IATPAGGIQAKIERFDSLEALQQAKPEDVQGKIAFIDQKTERHITGEGYGKSVGGRSKGA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC VAAAQKGAVAIVIRSIGTDHDRMAHTGVMRYQDDVPKIPAAAMSNPDADLVDALLKRNPD CHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHCCCC ALLELQMSPKNAGFNTSYNVIAEVTGSSKSNEIVLIGAHLDSWDEGTGAIDDGAGVAIVT EEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEH AAAKHIQDLPVKPARTVRVVLYAAEEIGLVGGKAYAEAHKAELPLHYIAAESDFGAGRIY HHHHHHHHCCCCCCCEEEEEEEEHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEE QIDTKVNESAFAEVQQALSPMSFNGVALGSNQASGGPDVSMLPALGVPVASLRQDGHDYF EEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEECCCCCCCHHHHHHCCCCCC DYHHTPNDTLDKIDPAALAQNVAAYAQFAYIMANSTATLTPLVIQSEK CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCC >Mature Secondary Structure MKPYQTTLLSSLLIGSLSACQTQVETAPTSEVIKLQQTALASQLGYDIVESLTVEVGPRL CCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCHHHHHHHHHHCCCCC AGSPKDIIAVNWAINKLTSLGFDRVYKEPVQVPIWERGEAKAKITFPVEQPLVITALGGS CCCCCCEEEEEHHHHHHHHHCHHHHHHCCCCCCCCCCCCCCEEEEECCCCCEEEEECCCC IATPAGGIQAKIERFDSLEALQQAKPEDVQGKIAFIDQKTERHITGEGYGKSVGGRSKGA CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCC VAAAQKGAVAIVIRSIGTDHDRMAHTGVMRYQDDVPKIPAAAMSNPDADLVDALLKRNPD CHHHCCCCEEEEEECCCCCHHHHHHHHHHHCCCCCCCCCHHHCCCCCHHHHHHHHHCCCC ALLELQMSPKNAGFNTSYNVIAEVTGSSKSNEIVLIGAHLDSWDEGTGAIDDGAGVAIVT EEEEEEECCCCCCCCCCCEEEEEEECCCCCCEEEEEECCCCCCCCCCCCCCCCCCEEEEH AAAKHIQDLPVKPARTVRVVLYAAEEIGLVGGKAYAEAHKAELPLHYIAAESDFGAGRIY HHHHHHHHCCCCCCCEEEEEEEEHHHHCCCCCHHHHHHHHCCCCEEEEEECCCCCCCEEE QIDTKVNESAFAEVQQALSPMSFNGVALGSNQASGGPDVSMLPALGVPVASLRQDGHDYF EEECCCCHHHHHHHHHHHCCCCCCCEEECCCCCCCCCCCEECCCCCCCHHHHHHCCCCCC DYHHTPNDTLDKIDPAALAQNVAAYAQFAYIMANSTATLTPLVIQSEK CCCCCCCCHHHHCCHHHHHHHHHHHHHHHHEEECCCCEEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA