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The map label for this gene is tonB [H]

Identifier: 160874173

GI number: 160874173

Start: 1247180

End: 1248049

Strand: Reverse

Name: tonB [H]

Synonym: Sbal195_1053

Alternate gene names: 160874173

Gene position: 1248049-1247180 (Counterclockwise)

Preceding gene: 160874178

Following gene: 160874172

Centisome position: 23.34

GC content: 47.82

Gene sequence:

>870_bases
GTGACACCAAAACGATATCTTGCCTTTGGCGCGTTAACTGTTGCCATACAAACGGGGGTTATCGCCTCGCAACCCGCTAT
CACTATGCAGCAAAGCGCCCAAGCATCGAGTGTAAACCAAGTGGCGAACGCTCCGAGCGCAAATCGTGTCACCCTTAATT
TGGCTACAACAACAAGCTCTGCAAGCAGCAACGTCAGTATTGAGCCCACTCAAACAGACGCCAAAATAGCCACTGTAAAC
AGCACAGTGCGAAAAGTATCAACAGCAGAATCTGTCGATAAGACGGTTAGAGAGGCCGTTGAAAAAACCAAAGCTGATCA
AAGAATTGACAGCCAGTTAGCTAAGACATCTTCAACCGCAAAGCCTACGACTAAAAATCATCCAGATGCGGATCCTTTAT
CGATGAACGCTTTAGTAAATAAGCGACCCGAACATGTTGAACAAGAATTAGAGCTAAAAACAGAGCCCAAAACAGCACAA
GAACTAACGAATTTAATCGCTAACGCAGCCGAACTAGATGCAAAAGCTACCCAGAATGTGGCCAGTGCAGCATCTGACAA
TGCCCCATTTAACGACAGCCTCCAAACGAACATAGTGGAATTAGCCAAACCGCTGTTTGCTACAGCGCCACCGCAACCGA
CTTATCCGCGAATAGCACGTAAGAAAGGATTCGAAGGAACGGCAACCATAGAAGTGATGTTTAACGAACTTGGCGAGCAA
CTGGTACTGACGTTAGTTACAAGCTCAGGCTTCAGCCTGCTAGATCAAGCAGCAATCGCTGCGGTTGAAAACTGGCAATT
TGCGGCGCCGACGCCAAGGCTAGCGAGTCACTACAAGGTCAGAGTGCCTATTCGTTTCGCGCTCAACTAG

Upstream 100 bases:

>100_bases
AAATGCAAATCATTATCATTTGCGATCTTGTTTGTATTGAGATATCTTAATTAGCGAAGATAAATGAGCAGAAGTGCTTT
ATTGGGGAAAAGAGGTTGCT

Downstream 100 bases:

>100_bases
CGGGCCTTAATCTTATTGCTGAAAAGCTAGCCATAGTAAAGCTCACTTTTTGATTCACTCACTGACGTATAAAACTGATT
TTTCAATCGATTGGAGAGGC

Product: TonB family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTPKRYLAFGALTVAIQTGVIASQPAITMQQSAQASSVNQVANAPSANRVTLNLATTTSSASSNVSIEPTQTDAKIATVN
STVRKVSTAESVDKTVREAVEKTKADQRIDSQLAKTSSTAKPTTKNHPDADPLSMNALVNKRPEHVEQELELKTEPKTAQ
ELTNLIANAAELDAKATQNVASAASDNAPFNDSLQTNIVELAKPLFATAPPQPTYPRIARKKGFEGTATIEVMFNELGEQ
LVLTLVTSSGFSLLDQAAIAAVENWQFAAPTPRLASHYKVRVPIRFALN

Sequences:

>Translated_289_residues
MTPKRYLAFGALTVAIQTGVIASQPAITMQQSAQASSVNQVANAPSANRVTLNLATTTSSASSNVSIEPTQTDAKIATVN
STVRKVSTAESVDKTVREAVEKTKADQRIDSQLAKTSSTAKPTTKNHPDADPLSMNALVNKRPEHVEQELELKTEPKTAQ
ELTNLIANAAELDAKATQNVASAASDNAPFNDSLQTNIVELAKPLFATAPPQPTYPRIARKKGFEGTATIEVMFNELGEQ
LVLTLVTSSGFSLLDQAAIAAVENWQFAAPTPRLASHYKVRVPIRFALN
>Mature_288_residues
TPKRYLAFGALTVAIQTGVIASQPAITMQQSAQASSVNQVANAPSANRVTLNLATTTSSASSNVSIEPTQTDAKIATVNS
TVRKVSTAESVDKTVREAVEKTKADQRIDSQLAKTSSTAKPTTKNHPDADPLSMNALVNKRPEHVEQELELKTEPKTAQE
LTNLIANAAELDAKATQNVASAASDNAPFNDSLQTNIVELAKPLFATAPPQPTYPRIARKKGFEGTATIEVMFNELGEQL
VLTLVTSSGFSLLDQAAIAAVENWQFAAPTPRLASHYKVRVPIRFALN

Specific function: Interacts with outer membrane receptor proteins that carry out high-affinity binding and energy dependent uptake into the periplasmic space of specific substrates. It could act to transduce energy from the cytoplasmic membrane to specific energy- requirin

COG id: COG0810

COG function: function code M; Periplasmic protein TonB, links inner and outer membranes

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein; Periplasmic side [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the tonB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003538
- InterPro:   IPR006260 [H]

Pfam domain/function: PF03544 TonB [H]

EC number: NA

Molecular weight: Translated: 30866; Mature: 30735

Theoretical pI: Translated: 8.87; Mature: 8.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPKRYLAFGALTVAIQTGVIASQPAITMQQSAQASSVNQVANAPSANRVTLNLATTTSS
CCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
ASSNVSIEPTQTDAKIATVNSTVRKVSTAESVDKTVREAVEKTKADQRIDSQLAKTSSTA
CCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KPTTKNHPDADPLSMNALVNKRPEHVEQELELKTEPKTAQELTNLIANAAELDAKATQNV
CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASAASDNAPFNDSLQTNIVELAKPLFATAPPQPTYPRIARKKGFEGTATIEVMFNELGEQ
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
LVLTLVTSSGFSLLDQAAIAAVENWQFAAPTPRLASHYKVRVPIRFALN
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEEEEECC
>Mature Secondary Structure 
TPKRYLAFGALTVAIQTGVIASQPAITMQQSAQASSVNQVANAPSANRVTLNLATTTSS
CCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCC
ASSNVSIEPTQTDAKIATVNSTVRKVSTAESVDKTVREAVEKTKADQRIDSQLAKTSSTA
CCCCEEECCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
KPTTKNHPDADPLSMNALVNKRPEHVEQELELKTEPKTAQELTNLIANAAELDAKATQNV
CCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
ASAASDNAPFNDSLQTNIVELAKPLFATAPPQPTYPRIARKKGFEGTATIEVMFNELGEQ
HHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCHHHHHHHHHHHH
LVLTLVTSSGFSLLDQAAIAAVENWQFAAPTPRLASHYKVRVPIRFALN
HHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCHHHCCEEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9781885; 10952301 [H]