| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874145
Identifier: 160874145
GI number: 160874145
Start: 1220830
End: 1221786
Strand: Reverse
Name: 160874145
Synonym: Sbal195_1025
Alternate gene names: NA
Gene position: 1221786-1220830 (Counterclockwise)
Preceding gene: 160874146
Following gene: 160874143
Centisome position: 22.85
GC content: 34.48
Gene sequence:
>957_bases TTGTCGAACTCGGATACAGAAGACCAGCAAGTAATATCGTGTGTGGCTGATGCCATTAAATTAGCAAAGGCAGAAACTTC AAATAACTCTAAGAAATGGTGGTTTAGGGGACAATCTAACGCCCGCCACAATCTTGTACCTAGTTTATTTAGGCCAATAG ACGGCAAATATTATGATGAGAACATGCTCATCGATGGGTTTGTAAGGATGCATCCAGAAGCAAGAGAACGTCATACCGAT GTTTTGGAGCTTCTTACTTATGCCCAGCACTATGGCTTACCGACAAGACTTCTCGATTGGACGGAAAATGTATTAGTTGC TCTTTATTTTGCATGCTCAACAGAAAATAACCTTGATGGTAAACTCTTTTTTTTACCCGATTTTGTAGACGATATATTTG ATTTCGATTATTACAACTTTGATTTTGGTAAAATATTTCTCACTAAATTAATAGAATATAATGATGCAGATGACTTTGAA AATATATTTAAACAGGCCGCATCTTACATCCGCGAAGATCATCTTAAATTCTTAAATGACCAGCTTTTATTTAATGAATT ACGTTTTGATGATTTTTTAGCATTAGAGAGAAAGTATCACGGTCCATTATCGAATAAAGGAGTCAATTTAAGTTTTAACA CCGAAGGCAGTGGAACAGGCCGTTTAATAAAACATGCTGGATTCATGTACACACCAAAACGCCTTAACAAACGATTAGTC ACACAACAAGGTTGCTTTACCTGCCATACAGGTAAAATATTGTATAACCAACAATATGTTAAAGTTAACGATGAATTTGA TAAATTTTCACGTTCCTTCATTATCCCAGCTAAGTTTAAGGAAGATATATTAAATGAACTTAAATATTGCGGAATATACG AAGCAACTTTATTTCCTGAGCTTGAATATCAAACAAAACATATTAAAAGTTATTCACTGTTTGAACAGAAGTGGTAA
Upstream 100 bases:
>100_bases AAGTTGCACCAGAACCATCTTTTTGCAAAGCTCGGTTGTCGAGTTCTATGAGTAAACTCATCGTATTTATTATTAAATAG CCAAGTTTAGGAGTTACAAA
Downstream 100 bases:
>100_bases TTCTAGCTAACTAATATTTTGCAACTATCTAAATTAATAAACTGAACTTATAGAGTTTTAATGCCTTAATGATTTACCAA TAACACCAGAGTCAAAGGAG
Product: FRG domain-containing protein
Products: NA
Alternate protein names: FRG Domain-Containing Protein
Number of amino acids: Translated: 318; Mature: 317
Protein sequence:
>318_residues MSNSDTEDQQVISCVADAIKLAKAETSNNSKKWWFRGQSNARHNLVPSLFRPIDGKYYDENMLIDGFVRMHPEARERHTD VLELLTYAQHYGLPTRLLDWTENVLVALYFACSTENNLDGKLFFLPDFVDDIFDFDYYNFDFGKIFLTKLIEYNDADDFE NIFKQAASYIREDHLKFLNDQLLFNELRFDDFLALERKYHGPLSNKGVNLSFNTEGSGTGRLIKHAGFMYTPKRLNKRLV TQQGCFTCHTGKILYNQQYVKVNDEFDKFSRSFIIPAKFKEDILNELKYCGIYEATLFPELEYQTKHIKSYSLFEQKW
Sequences:
>Translated_318_residues MSNSDTEDQQVISCVADAIKLAKAETSNNSKKWWFRGQSNARHNLVPSLFRPIDGKYYDENMLIDGFVRMHPEARERHTD VLELLTYAQHYGLPTRLLDWTENVLVALYFACSTENNLDGKLFFLPDFVDDIFDFDYYNFDFGKIFLTKLIEYNDADDFE NIFKQAASYIREDHLKFLNDQLLFNELRFDDFLALERKYHGPLSNKGVNLSFNTEGSGTGRLIKHAGFMYTPKRLNKRLV TQQGCFTCHTGKILYNQQYVKVNDEFDKFSRSFIIPAKFKEDILNELKYCGIYEATLFPELEYQTKHIKSYSLFEQKW >Mature_317_residues SNSDTEDQQVISCVADAIKLAKAETSNNSKKWWFRGQSNARHNLVPSLFRPIDGKYYDENMLIDGFVRMHPEARERHTDV LELLTYAQHYGLPTRLLDWTENVLVALYFACSTENNLDGKLFFLPDFVDDIFDFDYYNFDFGKIFLTKLIEYNDADDFEN IFKQAASYIREDHLKFLNDQLLFNELRFDDFLALERKYHGPLSNKGVNLSFNTEGSGTGRLIKHAGFMYTPKRLNKRLVT QQGCFTCHTGKILYNQQYVKVNDEFDKFSRSFIIPAKFKEDILNELKYCGIYEATLFPELEYQTKHIKSYSLFEQKW
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37410; Mature: 37278
Theoretical pI: Translated: 5.85; Mature: 5.85
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNSDTEDQQVISCVADAIKLAKAETSNNSKKWWFRGQSNARHNLVPSLFRPIDGKYYDE CCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEECC NMLIDGFVRMHPEARERHTDVLELLTYAQHYGLPTRLLDWTENVLVALYFACSTENNLDG CEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC KLFFLPDFVDDIFDFDYYNFDFGKIFLTKLIEYNDADDFENIFKQAASYIREDHLKFLND EEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLLFNELRFDDFLALERKYHGPLSNKGVNLSFNTEGSGTGRLIKHAGFMYTPKRLNKRLV HHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCEECHHHHHHHHH TQQGCFTCHTGKILYNQQYVKVNDEFDKFSRSFIIPAKFKEDILNELKYCGIYEATLFPE HHCCCEEEECCEEEECCEEEEECCHHHHHCCCEECCHHHHHHHHHHHHHCCEEHHHHCCC LEYQTKHIKSYSLFEQKW CCHHHHHHHHHHHHHCCC >Mature Secondary Structure SNSDTEDQQVISCVADAIKLAKAETSNNSKKWWFRGQSNARHNLVPSLFRPIDGKYYDE CCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCHHHHCCCCCCEECC NMLIDGFVRMHPEARERHTDVLELLTYAQHYGLPTRLLDWTENVLVALYFACSTENNLDG CEEEEHHHHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCC KLFFLPDFVDDIFDFDYYNFDFGKIFLTKLIEYNDADDFENIFKQAASYIREDHLKFLND EEEECHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH QLLFNELRFDDFLALERKYHGPLSNKGVNLSFNTEGSGTGRLIKHAGFMYTPKRLNKRLV HHHHHHHCHHHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHCCCEECHHHHHHHHH TQQGCFTCHTGKILYNQQYVKVNDEFDKFSRSFIIPAKFKEDILNELKYCGIYEATLFPE HHCCCEEEECCEEEECCEEEEECCHHHHHCCCEECCHHHHHHHHHHHHHCCEEHHHHCCC LEYQTKHIKSYSLFEQKW CCHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA