| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is hcrC [H]
Identifier: 160874122
GI number: 160874122
Start: 1191566
End: 1192099
Strand: Reverse
Name: hcrC [H]
Synonym: Sbal195_1002
Alternate gene names: 160874122
Gene position: 1192099-1191566 (Counterclockwise)
Preceding gene: 160874123
Following gene: 160874121
Centisome position: 22.29
GC content: 49.25
Gene sequence:
>534_bases ATGAGCCAGTCTATTAAACTGACCATTAATAACCAAGCCGTAGGCCCGATTGAAGTCGCCGATGGCGTGATGATGATTGA GTTTCTACATGAGTACTTAAACCTCACAGGTACTAAGTTTGGTTGCGGCGCGGGCGTATGCCACGCCTGTACTGTGATCG TCGACGACGAGCAAGGCATGAGCGAAGTGGTGCGTACCTGCATCAATGGCGTCGAGCGTTTTAATGGTAAACGCGTCCGC ACAGTCGAAGGTCATGCTAGACAAAACTCCCTTGGTGAAATCACCGCCCTGAGCCCAGTGCAAGAAGCTTTTTTGGAACA TTTCTCGTTTCAATGTGGCTGGTGTACCTCGGGCTTTGTCAACGAATCGACTGCGCTGCTTGAGCGATTAGAGCGACAAC CTATCGCTAAAGATCAAGTTGAAAAAGTCGTAGAAGATGCCTTGAGTGAACACGTATGCCGCTGTACTGGCTACGTAAAA TACTATGCGGCGGTCAAAGATCTGATCCTCAACACTAAGGGGTTAACCCTGTGA
Upstream 100 bases:
>100_bases TCCCTGTGGTCGCGGCGCTGATTGAAGCCGTGTATCAAGCGACCCATGTCCGCTTTTACGATTTACCCATGACAGCGAAA AAAATTAAGGAGGCCATGGC
Downstream 100 bases:
>100_bases TGACATCAGCCAATCTGCGCCATTTCTCGCGCCATTTCCCGCATATTAGTAGGATAAAAAATCTGTTGAGCCACAATCTA CTCCTGAGTTTAGGGCTAGG
Product: 2Fe-2S iron-sulfur cluster-binding domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 177; Mature: 176
Protein sequence:
>177_residues MSQSIKLTINNQAVGPIEVADGVMMIEFLHEYLNLTGTKFGCGAGVCHACTVIVDDEQGMSEVVRTCINGVERFNGKRVR TVEGHARQNSLGEITALSPVQEAFLEHFSFQCGWCTSGFVNESTALLERLERQPIAKDQVEKVVEDALSEHVCRCTGYVK YYAAVKDLILNTKGLTL
Sequences:
>Translated_177_residues MSQSIKLTINNQAVGPIEVADGVMMIEFLHEYLNLTGTKFGCGAGVCHACTVIVDDEQGMSEVVRTCINGVERFNGKRVR TVEGHARQNSLGEITALSPVQEAFLEHFSFQCGWCTSGFVNESTALLERLERQPIAKDQVEKVVEDALSEHVCRCTGYVK YYAAVKDLILNTKGLTL >Mature_176_residues SQSIKLTINNQAVGPIEVADGVMMIEFLHEYLNLTGTKFGCGAGVCHACTVIVDDEQGMSEVVRTCINGVERFNGKRVRT VEGHARQNSLGEITALSPVQEAFLEHFSFQCGWCTSGFVNESTALLERLERQPIAKDQVEKVVEDALSEHVCRCTGYVKY YAAVKDLILNTKGLTL
Specific function: Catalyzes reductive dehydroxylation of 4-hydroxybenzoyl- CoA. Reaction is not reversible [H]
COG id: COG2080
COG function: function code C; Aerobic-type carbon monoxide dehydrogenase, small subunit CoxS/CutS homologs
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 2Fe-2S ferredoxin-type domain [H]
Homologues:
Organism=Escherichia coli, GI1786480, Length=160, Percent_Identity=32.5, Blast_Score=87, Evalue=7e-19, Organism=Escherichia coli, GI1789232, Length=164, Percent_Identity=32.3170731707317, Blast_Score=82, Evalue=3e-17, Organism=Caenorhabditis elegans, GI17540638, Length=171, Percent_Identity=33.3333333333333, Blast_Score=74, Evalue=4e-14, Organism=Caenorhabditis elegans, GI32566215, Length=159, Percent_Identity=29.559748427673, Blast_Score=70, Evalue=5e-13, Organism=Caenorhabditis elegans, GI17539860, Length=159, Percent_Identity=29.559748427673, Blast_Score=70, Evalue=5e-13, Organism=Drosophila melanogaster, GI17737937, Length=164, Percent_Identity=35.9756097560976, Blast_Score=79, Evalue=1e-15, Organism=Drosophila melanogaster, GI24647199, Length=171, Percent_Identity=28.6549707602339, Blast_Score=70, Evalue=6e-13, Organism=Drosophila melanogaster, GI24647195, Length=177, Percent_Identity=27.683615819209, Blast_Score=70, Evalue=7e-13, Organism=Drosophila melanogaster, GI24647197, Length=176, Percent_Identity=27.8409090909091, Blast_Score=70, Evalue=8e-13, Organism=Drosophila melanogaster, GI24647201, Length=171, Percent_Identity=29.8245614035088, Blast_Score=70, Evalue=1e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002888 - InterPro: IPR006058 - InterPro: IPR017606 - InterPro: IPR012675 - InterPro: IPR001041 [H]
Pfam domain/function: PF00111 Fer2; PF01799 Fer2_2 [H]
EC number: =1.3.99.20 [H]
Molecular weight: Translated: 19489; Mature: 19357
Theoretical pI: Translated: 5.27; Mature: 5.27
Prosite motif: PS51085 2FE2S_FER_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 4.5 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQSIKLTINNQAVGPIEVADGVMMIEFLHEYLNLTGTKFGCGAGVCHACTVIVDDEQGM CCCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCCH SEVVRTCINGVERFNGKRVRTVEGHARQNSLGEITALSPVQEAFLEHFSFQCGWCTSGFV HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC NESTALLERLERQPIAKDQVEKVVEDALSEHVCRCTGYVKYYAAVKDLILNTKGLTL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure SQSIKLTINNQAVGPIEVADGVMMIEFLHEYLNLTGTKFGCGAGVCHACTVIVDDEQGM CCCEEEEECCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEECCCCH SEVVRTCINGVERFNGKRVRTVEGHARQNSLGEITALSPVQEAFLEHFSFQCGWCTSGFV HHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCC NESTALLERLERQPIAKDQVEKVVEDALSEHVCRCTGYVKYYAAVKDLILNTKGLTL CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9490068 [H]