| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is 160874117
Identifier: 160874117
GI number: 160874117
Start: 1183856
End: 1186153
Strand: Reverse
Name: 160874117
Synonym: Sbal195_0997
Alternate gene names: NA
Gene position: 1186153-1183856 (Counterclockwise)
Preceding gene: 160874118
Following gene: 160874116
Centisome position: 22.18
GC content: 46.48
Gene sequence:
>2298_bases ATGGCCACAGGGAAATACAAGGTAGTTCACGCCGCAATCGCACTGACAGTGGCAAGTATCACACTCTTGTTAACCGCCTG CGATGACTCAACGACGTCCTCAGAATCGGTTAGGACGAATATACCTGCAGATCGCGAGTATCAGATTATTTCTACCATAA GCCTCAACGATGGTTTCGAAACTCGCAAAGTGTTGCAGGCACGATTACTGCTGGATTACCAATTACAAGATGTAGAGGGT AAGGCGGCCAGCTTGACCACACCGTTAGCCCATAACGCCCGCTTTTTTATCCAACCTAACCTACTGCAAATTAGCGATTA TGGCATGCCGATCCCGGTGAGCAATATTGACCCTAAAGGCAAGTCCAATGAAATCTTTCAGTTGGTTAAAGATGGCTTTA ATGTGGAATTTAACAATGGTGAAGTCCGCCAACTGACTCCCATTGCCAAGATGGATCAAAAAGATATCAAGGAGTTATTT GAGCGCTGGCAAAATCTTAATCACTTGTTTAAACAAGCCCCAACCTTGCCTGTAGCGCTTGAACCTAGCGTCGGTTATAG CATCAACGCGCCCATGGATGGGCGCTTAACTTGGACGGTTGAGCAGGTCAGTGAAGATAAGTTGATCGCCGTATTACAAG GGGAGAAAGACAAGTATAAGGCCTATGGCAAGTTCGAAGTTAACCGCAAAACCGGTTGGTTAGAGAGCATGGCGTTTTTT CAGCGGGAAGAGCGCCAAGGGCGTACCTTTACCCACCGAACCGTAATGGCGCCTAAGGAGAGGCCGTATATCATGAGCAC GCTTTGGCATGCCGATGATAGCTTTGATGCTGAGCGCGATAGGGATGATAGCCAAAAAGAACTGTATCGCATTAGCGATG TAGCGCAGGAATATCGCCCCAATAATAAGGCATTTATAAAATCCTTATTACCTGATCAACAAGGTATTTTAGATAATCTT GGCCCTTGGGGCACCGATACCCCAGAAGATCTGCAATTGCGCTTTGTCCACAATATGAGTCCGCAATATGTGGAAGCCGA TGTGCGTTATGAGGACTTAACCGCCTTTGATGCTAACGGCAAACCGATTGACATTCACTTCTGGCAGCACGGTAAAGGTT GGGCGAGGAATTATAATCCCTCGATTGAATCTGCAACCGATATTATTGCTACGGGTTGGGATAACACCGCGAATAAACTC AAACAGATAGATCATATTACTGCCAAGCTAACACTTATCCCACAGACGAATAAGATAGTCGAAAAGTCGTGGGATGAACT GCTGGCAACACCTTACAGGGTTGGCGATGCCAGCCTAACAATCCAAGTACTCGATGCCGAGGCGAAACTCTTTAAAGTCG TGTCAAAGCAGAGTGAGGATCAGAGTATTAATCTGCCTTTCCAACAATTTAAAGGCATGATGGCTGAGGCCCGTCGCGAA GGTAATTATCCCTCTTGGCTAACAGCGACAGAAAAGGAACTGCTAGAGCAATTGATTGGAACCGATGAGAGCCATCACCT CATCAGCAACGCACTGTTACTCAAGCTGGATGAAATCCCTAAAACCCTAATGTTAATTGAGCAACAACCCCAGCCGGAGT TGACTCAAACCAAAACGATCCGCTTTGTACAATTTAGCGACTACAACAAAAATCTGGCTAATCCTCCCACCGAGTTTGGT AACGCTGGCCTAGGTAGCTTTATCAATCCGGCGCTAGATGCTGCAAAAAATGAGTTCAGTACGATCCAAGGGATAAAACC TGTAACTGACAATGGTCATAATCTGTATATTCCCATGTCAGCTGCCTTGGCAACCGCCTGCAAACCTGAAATAGATCAAG GTTTTAATGAGGGTAAAAATCCCGTCACTTGGCAGTTTGATCCCAACGCCCCAAACGGGGCAGCTTATAGCTTGATGACC CCAGACCGCGTGCGGCAGTTTTTCTACGATAAACAGATCAAGGGCAAGATCCATTGCCAAGGTGATATTCACTGGCAGCC TTTAGAACTGGCTGTAACCGACCGCCCTTGGTTAATCGATTTAGAGTCTTGGCTGACGCAAACCGGATATGGCAATGAGC CGAGTAGCGATCTTAAAAATTACTTTAAGGTCGAAGATGCCCAAGGCAATCTGTTAAGCATTCGACTCCCCGAAAATACT GAGCAGCGGATAAACGAGGTGCTGGTCGATGGCCGTTATTTGAGTATTGCAGGACCCGCCGCCAAGGTGAGTTATATGAC TATCTCTAAAGACCCCGTCGATATCCCCTATGAATTCACTTTTAAACCTTTGCCATAA
Upstream 100 bases:
>100_bases GACGTCGTTTTATTGCCTCAGATAGTTTTTGTGTATAATGTCGCCAAACCAAGATTAATACATTTACATTTCAATAACAT GCGCAGCCAAGGGAGCACAA
Downstream 100 bases:
>100_bases AAAGGAGCGGTTATGCGTATATTTACAGTAAAACGGCTCCTTGGAGCACTGTTATTTATTAGCACCCAAGTGAGTGCTGA TTTCATTTTGCTGGATGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 765; Mature: 764
Protein sequence:
>765_residues MATGKYKVVHAAIALTVASITLLLTACDDSTTSSESVRTNIPADREYQIISTISLNDGFETRKVLQARLLLDYQLQDVEG KAASLTTPLAHNARFFIQPNLLQISDYGMPIPVSNIDPKGKSNEIFQLVKDGFNVEFNNGEVRQLTPIAKMDQKDIKELF ERWQNLNHLFKQAPTLPVALEPSVGYSINAPMDGRLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF QREERQGRTFTHRTVMAPKERPYIMSTLWHADDSFDAERDRDDSQKELYRISDVAQEYRPNNKAFIKSLLPDQQGILDNL GPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAFDANGKPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKL KQIDHITAKLTLIPQTNKIVEKSWDELLATPYRVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE GNYPSWLTATEKELLEQLIGTDESHHLISNALLLKLDEIPKTLMLIEQQPQPELTQTKTIRFVQFSDYNKNLANPPTEFG NAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMSAALATACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMT PDRVRQFFYDKQIKGKIHCQGDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLSIRLPENT EQRINEVLVDGRYLSIAGPAAKVSYMTISKDPVDIPYEFTFKPLP
Sequences:
>Translated_765_residues MATGKYKVVHAAIALTVASITLLLTACDDSTTSSESVRTNIPADREYQIISTISLNDGFETRKVLQARLLLDYQLQDVEG KAASLTTPLAHNARFFIQPNLLQISDYGMPIPVSNIDPKGKSNEIFQLVKDGFNVEFNNGEVRQLTPIAKMDQKDIKELF ERWQNLNHLFKQAPTLPVALEPSVGYSINAPMDGRLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF QREERQGRTFTHRTVMAPKERPYIMSTLWHADDSFDAERDRDDSQKELYRISDVAQEYRPNNKAFIKSLLPDQQGILDNL GPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAFDANGKPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKL KQIDHITAKLTLIPQTNKIVEKSWDELLATPYRVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE GNYPSWLTATEKELLEQLIGTDESHHLISNALLLKLDEIPKTLMLIEQQPQPELTQTKTIRFVQFSDYNKNLANPPTEFG NAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMSAALATACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMT PDRVRQFFYDKQIKGKIHCQGDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLSIRLPENT EQRINEVLVDGRYLSIAGPAAKVSYMTISKDPVDIPYEFTFKPLP >Mature_764_residues ATGKYKVVHAAIALTVASITLLLTACDDSTTSSESVRTNIPADREYQIISTISLNDGFETRKVLQARLLLDYQLQDVEGK AASLTTPLAHNARFFIQPNLLQISDYGMPIPVSNIDPKGKSNEIFQLVKDGFNVEFNNGEVRQLTPIAKMDQKDIKELFE RWQNLNHLFKQAPTLPVALEPSVGYSINAPMDGRLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFFQ REERQGRTFTHRTVMAPKERPYIMSTLWHADDSFDAERDRDDSQKELYRISDVAQEYRPNNKAFIKSLLPDQQGILDNLG PWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAFDANGKPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKLK QIDHITAKLTLIPQTNKIVEKSWDELLATPYRVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARREG NYPSWLTATEKELLEQLIGTDESHHLISNALLLKLDEIPKTLMLIEQQPQPELTQTKTIRFVQFSDYNKNLANPPTEFGN AGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMSAALATACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMTP DRVRQFFYDKQIKGKIHCQGDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLSIRLPENTE QRINEVLVDGRYLSIAGPAAKVSYMTISKDPVDIPYEFTFKPLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 86586; Mature: 86454
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATGKYKVVHAAIALTVASITLLLTACDDSTTSSESVRTNIPADREYQIISTISLNDGFE CCCCCEEHHHHHHHHHHHHHHEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEECCCCHH TRKVLQARLLLDYQLQDVEGKAASLTTPLAHNARFFIQPNLLQISDYGMPIPVSNIDPKG HHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCC KSNEIFQLVKDGFNVEFNNGEVRQLTPIAKMDQKDIKELFERWQNLNHLFKQAPTLPVAL CCHHHHHHHHCCCCEEECCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE EPSVGYSINAPMDGRLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF CCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEECEEEECCCCCHHHHHHHH QREERQGRTFTHRTVMAPKERPYIMSTLWHADDSFDAERDRDDSQKELYRISDVAQEYRP HHHHHCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC NNKAFIKSLLPDQQGILDNLGPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAFDANG CCHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCC KPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKLKQIDHITAKLTLIPQTNKIV CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCEEEEEEEECCCCHHH EKSWDELLATPYRVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE HHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHC GNYPSWLTATEKELLEQLIGTDESHHLISNALLLKLDEIPKTLMLIEQQPQPELTQTKTI CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHEEEEHHCCCEEEHEECCCCCCCCCCEEE RFVQFSDYNKNLANPPTEFGNAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMS EEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH AALATACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMTPDRVRQFFYDKQIKGKIHCQ HHHHHHCCCHHHHCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEE GDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLSIRLPENT CCCCEEEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHEEEECCCCCEEEEECCCCH EQRINEVLVDGRYLSIAGPAAKVSYMTISKDPVDIPYEFTFKPLP HHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCC >Mature Secondary Structure ATGKYKVVHAAIALTVASITLLLTACDDSTTSSESVRTNIPADREYQIISTISLNDGFE CCCCEEHHHHHHHHHHHHHHEEEEECCCCCCCCCCEECCCCCCCCEEEEEEEECCCCHH TRKVLQARLLLDYQLQDVEGKAASLTTPLAHNARFFIQPNLLQISDYGMPIPVSNIDPKG HHHHHHHHHHHHEEEECCCCCCCEECCCCCCCCEEEECCCEEEEECCCCCCCCCCCCCCC KSNEIFQLVKDGFNVEFNNGEVRQLTPIAKMDQKDIKELFERWQNLNHLFKQAPTLPVAL CCHHHHHHHHCCCCEEECCCCEEEECCHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCEEE EPSVGYSINAPMDGRLTWTVEQVSEDKLIAVLQGEKDKYKAYGKFEVNRKTGWLESMAFF CCCCCEEECCCCCCEEEEEEECCCCCCEEEEEECCCCCEEEECEEEECCCCCHHHHHHHH QREERQGRTFTHRTVMAPKERPYIMSTLWHADDSFDAERDRDDSQKELYRISDVAQEYRP HHHHHCCCEEEEEEEECCCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCC NNKAFIKSLLPDQQGILDNLGPWGTDTPEDLQLRFVHNMSPQYVEADVRYEDLTAFDANG CCHHHHHHHCCCHHHHHHCCCCCCCCCCCCEEEEEEECCCCCEEEECCCEEEEEEECCCC KPIDIHFWQHGKGWARNYNPSIESATDIIATGWDNTANKLKQIDHITAKLTLIPQTNKIV CEEEEEEEECCCCCCCCCCCCCCCCCCEEEECCCHHHHHHHHHHCEEEEEEEECCCCHHH EKSWDELLATPYRVGDASLTIQVLDAEAKLFKVVSKQSEDQSINLPFQQFKGMMAEARRE HHHHHHHHCCCEEECCCEEEEEEECCHHHHHHHHHCCCCCCEECCCHHHHHHHHHHHHHC GNYPSWLTATEKELLEQLIGTDESHHLISNALLLKLDEIPKTLMLIEQQPQPELTQTKTI CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHEEEEHHCCCEEEHEECCCCCCCCCCEEE RFVQFSDYNKNLANPPTEFGNAGLGSFINPALDAAKNEFSTIQGIKPVTDNGHNLYIPMS EEEEECCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEHH AALATACKPEIDQGFNEGKNPVTWQFDPNAPNGAAYSLMTPDRVRQFFYDKQIKGKIHCQ HHHHHHCCCHHHHCCCCCCCCEEEEECCCCCCCCEEECCCHHHHHHHHHCCCCCCEEEEE GDIHWQPLELAVTDRPWLIDLESWLTQTGYGNEPSSDLKNYFKVEDAQGNLLSIRLPENT CCCCEEEEEEEECCCCEEEEHHHHHHHCCCCCCCHHHHHHHEEEECCCCCEEEEECCCCH EQRINEVLVDGRYLSIAGPAAKVSYMTISKDPVDIPYEFTFKPLP HHHHHHHHHCCEEEEEECCCCEEEEEEECCCCCCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA