| Definition | Shewanella baltica OS195 chromosome, complete genome. |
|---|---|
| Accession | NC_009997 |
| Length | 5,347,283 |
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The map label for this gene is 160874089
Identifier: 160874089
GI number: 160874089
Start: 1151537
End: 1152745
Strand: Reverse
Name: 160874089
Synonym: Sbal195_0969
Alternate gene names: NA
Gene position: 1152745-1151537 (Counterclockwise)
Preceding gene: 160874095
Following gene: 160874088
Centisome position: 21.56
GC content: 46.73
Gene sequence:
>1209_bases ATGAAATCCATTCAAACCAAAGATCCTAAAGCACTCTTGCTGTGGATGACCTTTGTGATGTCGCTTGTGTTTGCCGTTTG GCAGGCACTGCTCAATAACTTCGTGATTGAAAAAGCCCAGTTCACCGGTGCTGAAATCGGCATGTTACAAAGCCTGCGCG AGATCCCAGGTTTCTTGGCTTTCACCGCCATTTTTGTGCTTTTACTCATTCGAGAACAAGCCTTCGCCCTACTCTCGCTG GCCTTGCTTTGTATCGGCGTGGCGGTGACAGGTTTCTTTCCTCAAGTCATCGGCTTGTATCTGACGACTGTGTTGATGTC CGTCGGGTTTCACTATTTTGAAACCATCAACCAATCACTGACGCTGCAGTGGGTCGATAAAAAAGATGCGGCGGGTTTTA TGGGTAAAGCACTGGCGTGGCGCTCGGCCGCAGCCTTAGTGGGCTATGCCAGTATTTGGTTAGTGATGACCTGGTTGAAG TTAGACTATCAACACATGTATCTGATTATTGGTGCGTTAGGTCTGGTCATGGTGCTGACCATGACTTGGTATTACCCTAA ATTTGAGACCACGGAAGTACAACATAAGAAAATCATTCTGCGTAAGCGCTATTGGCTCTATTACCTGCTGACCTTTTTCT CGGGTGCGAGACGGCAAATTTTTATGGTGTTTGCGGGCTTTATGATGGTCGAAAAGTTTGGTTATAGCGTGAGTGAAATT ACCGCGCTGTTCTTAATAAACTATGTCGTCAATCTGCTGTTTGCGCCTGCGATTGGGCGGTTTATTGGCCGAATTGGTGA GCGTAATGCGCTGACAGTGGAATACGTCGGACTCATCATAGTCTTCATCAGTTACGCCTTAGTCGAGCAAGCACACATGG CGGCAGCGCTGTATGTGATCGACCATTTACTGTTTGCTATGGCTATCGCGATGAAAACCTATTTTCAAAAAATTGCCGAC AGCAAAGATATTGCCGCCACTATGTCGGTCAGTTTCACCATTAATCACATTGCCGCTGTGATTATTCCTGTGCTTTTGGG CTTATTATGGTTAACCGATCCCGCCTTGGTATTTTACATAGGCGCAGGCTTTGCCGTATGTTCGTTAATTCTGGCGCTCA ATGTACCGCGTCATCCTGAACCGGGTAATGAAACCTTATGGTCTTGGACGAGCAAAAAAGCGAAATCCATCGCTAAAGCG GTCGAATAA
Upstream 100 bases:
>100_bases TATTGATTCATAAACCACACACTCTTTAAGCGTTAAGTGATCTAGCCTATTAGCCAAAAAAGCATTAGCATTTGCACACT TACCGCCTGAGTCCATATCC
Downstream 100 bases:
>100_bases AGCGGCATAATACCGGGCCTAGGAATAAGCTAAGCTCAATGTTGAGTCTAGAACTGAACGCTAAAGTGATCGCCATCTAA GCTAGGCAAACAAGTTAAAC
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Transporter Facilitator Family; Transporter MFS Superfamily; Permease Facilitator Superfamily; Permease Of Facilitator Superfamily; Facilitator Superfamily Permease; MFS Protein Permease Component; Multidrug-Efflux Transporter MFS Family; Facilitator Family Transporter
Number of amino acids: Translated: 402; Mature: 402
Protein sequence:
>402_residues MKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSLREIPGFLAFTAIFVLLLIREQAFALLSL ALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAGFMGKALAWRSAAALVGYASIWLVMTWLK LDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTFFSGARRQIFMVFAGFMMVEKFGYSVSEI TALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAHMAAALYVIDHLLFAMAIAMKTYFQKIAD SKDIAATMSVSFTINHIAAVIIPVLLGLLWLTDPALVFYIGAGFAVCSLILALNVPRHPEPGNETLWSWTSKKAKSIAKA VE
Sequences:
>Translated_402_residues MKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSLREIPGFLAFTAIFVLLLIREQAFALLSL ALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAGFMGKALAWRSAAALVGYASIWLVMTWLK LDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTFFSGARRQIFMVFAGFMMVEKFGYSVSEI TALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAHMAAALYVIDHLLFAMAIAMKTYFQKIAD SKDIAATMSVSFTINHIAAVIIPVLLGLLWLTDPALVFYIGAGFAVCSLILALNVPRHPEPGNETLWSWTSKKAKSIAKA VE >Mature_402_residues MKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSLREIPGFLAFTAIFVLLLIREQAFALLSL ALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSLTLQWVDKKDAAGFMGKALAWRSAAALVGYASIWLVMTWLK LDYQHMYLIIGALGLVMVLTMTWYYPKFETTEVQHKKIILRKRYWLYYLLTFFSGARRQIFMVFAGFMMVEKFGYSVSEI TALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAHMAAALYVIDHLLFAMAIAMKTYFQKIAD SKDIAATMSVSFTINHIAAVIIPVLLGLLWLTDPALVFYIGAGFAVCSLILALNVPRHPEPGNETLWSWTSKKAKSIAKA VE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45213; Mature: 45213
Theoretical pI: Translated: 9.60; Mature: 9.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 4.2 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSLREIPGFLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH FTAIFVLLLIREQAFALLSLALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TLQWVDKKDAAGFMGKALAWRSAAALVGYASIWLVMTWLKLDYQHMYLIIGALGLVMVLT EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTWYYPKFETTEVQHKKIILRKRYWLYYLLTFFSGARRQIFMVFAGFMMVEKFGYSVSEI HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHH TALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAHMAAALYVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHLLFAMAIAMKTYFQKIADSKDIAATMSVSFTINHIAAVIIPVLLGLLWLTDPALVFYI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GAGFAVCSLILALNVPRHPEPGNETLWSWTSKKAKSIAKAVE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSIQTKDPKALLLWMTFVMSLVFAVWQALLNNFVIEKAQFTGAEIGMLQSLREIPGFLA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCHHHH FTAIFVLLLIREQAFALLSLALLCIGVAVTGFFPQVIGLYLTTVLMSVGFHYFETINQSL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCE TLQWVDKKDAAGFMGKALAWRSAAALVGYASIWLVMTWLKLDYQHMYLIIGALGLVMVLT EEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH MTWYYPKFETTEVQHKKIILRKRYWLYYLLTFFSGARRQIFMVFAGFMMVEKFGYSVSEI HHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHCCCHHHH TALFLINYVVNLLFAPAIGRFIGRIGERNALTVEYVGLIIVFISYALVEQAHMAAALYVI HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH DHLLFAMAIAMKTYFQKIADSKDIAATMSVSFTINHIAAVIIPVLLGLLWLTDPALVFYI HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHH GAGFAVCSLILALNVPRHPEPGNETLWSWTSKKAKSIAKAVE HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA