Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is cysQ [H]
Identifier: 160873298
GI number: 160873298
Start: 209865
End: 210677
Strand: Direct
Name: cysQ [H]
Synonym: Sbal195_0172
Alternate gene names: 160873298
Gene position: 209865-210677 (Clockwise)
Preceding gene: 160873297
Following gene: 160873299
Centisome position: 3.92
GC content: 50.18
Gene sequence:
>813_bases ATGAAGCCAGAAGAGTTGATCGACGAAGTTATTGCGATTGCGACCGATGCCGGGATAACTATCCGTGACATTTATCTCAA AGGTAATTTTGAGCGAGAAATGAAGTCTGACAATACCCCTGTCACTTCCGCAGATTTAGCGGCGAACAAGATCATTTGTG ACCGATTGACTGCTTTAACGCCTGATATTCCTGTGTTATCTGAAGAGGCAGCCGACATTCCGCTGAGCGTGCGTGAATCT TGGAAGCGCTATTGGTTGGTCGATCCACTCGATGGCACGGGTGAGTTTATTGCCGGCAGTGGTGATTTTTCGGTGATTAT TGCACTCGTTGAGCACAATCGTCCCGTGATGGGCGTGGTGTATGTGCCTATGACGCAAGTGTGTTATTACGCGATTGCAG GTTTAGGGGCATACAAACGCACGGATAAACAGGAAGTGCGGATCAGCAGCCGCCAAATCGAGCACCGTGAAAAGGTCTCC CTAAGATTGGCCGTGAGTCGCCGTCAGGATCCTCAATCTGTATTGACCCTGTTCAACCACCCTAAACATTGCGAGCTCGT GGTGATGGGCGGCGCAGCGTTAAAGAGTTGTCTTGTCGCCGAAGGTCGAGCCGATTGTTATGTGCGAGTTGGCCCAACGG GCGAGTGGGATACGGGAGCGGCGCAAATCATAGTCGAAGAGGCGGGTGGACAGTTGATGGATACTGAGCTGCAACCGTTA ACCTACAATGAGCGCGAGACTTTAGAAAACCCTAACTTTATCGTAGTGGGCGCACCCAACTTAGAGTGGGATAAGATTTT AATAGGTGAATGA
Upstream 100 bases:
>100_bases TAGCGCAAAAGTATTTATACCTTAAATAATCTTTTTCCTTTTAAGCGTTCAAAGCTGGAACGCTTGCAAAACATTCGCGA ACTTTGCGATTGGAGTTGTT
Downstream 100 bases:
>100_bases TTTTCGAATGCAGTCTATACGTCCGGTATTAAAGTCAGATTTATTCGCGGTTTATCAGCTTGAGCAGGCCATTTTTGGCG AACATAGCTATCCCGATTTT
Product: 3'(2'),5'-bisphosphate nucleotidase
Products: NA
Alternate protein names: 3'(2'),5-bisphosphonucleoside 3'(2')-phosphohydrolase; 3'-phosphoadenosine 5'-phosphate phosphatase; PAP phosphatase; DPNPase [H]
Number of amino acids: Translated: 270; Mature: 270
Protein sequence:
>270_residues MKPEELIDEVIAIATDAGITIRDIYLKGNFEREMKSDNTPVTSADLAANKIICDRLTALTPDIPVLSEEAADIPLSVRES WKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVVYVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIEHREKVS LRLAVSRRQDPQSVLTLFNHPKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIVEEAGGQLMDTELQPL TYNERETLENPNFIVVGAPNLEWDKILIGE
Sequences:
>Translated_270_residues MKPEELIDEVIAIATDAGITIRDIYLKGNFEREMKSDNTPVTSADLAANKIICDRLTALTPDIPVLSEEAADIPLSVRES WKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVVYVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIEHREKVS LRLAVSRRQDPQSVLTLFNHPKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIVEEAGGQLMDTELQPL TYNERETLENPNFIVVGAPNLEWDKILIGE >Mature_270_residues MKPEELIDEVIAIATDAGITIRDIYLKGNFEREMKSDNTPVTSADLAANKIICDRLTALTPDIPVLSEEAADIPLSVRES WKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVVYVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIEHREKVS LRLAVSRRQDPQSVLTLFNHPKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIVEEAGGQLMDTELQPL TYNERETLENPNFIVVGAPNLEWDKILIGE
Specific function: Converts 3'(2')-phosphoadenosine 5'-phosphate (PAP) to AMP. May also convert adenosine 3'-phosphate 5'-phosphosulfate (PAPS) to adenosine 5'-phosphosulfate (APS) [H]
COG id: COG1218
COG function: function code P; 3'-Phosphoadenosine 5'-phosphosulfate (PAPS) 3'-phosphatase
Gene ontology:
Cell location: Cytoplasm. Cell inner membrane; Peripheral membrane protein; Cytoplasmic side [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the inositol monophosphatase family [H]
Homologues:
Organism=Homo sapiens, GI221625487, Length=258, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI5031789, Length=258, Percent_Identity=27.906976744186, Blast_Score=80, Evalue=2e-15, Organism=Homo sapiens, GI7657236, Length=243, Percent_Identity=27.9835390946502, Blast_Score=76, Evalue=3e-14, Organism=Escherichia coli, GI1790659, Length=253, Percent_Identity=41.501976284585, Blast_Score=172, Evalue=3e-44, Organism=Escherichia coli, GI1788882, Length=208, Percent_Identity=29.3269230769231, Blast_Score=76, Evalue=2e-15, Organism=Caenorhabditis elegans, GI193202572, Length=250, Percent_Identity=27.2, Blast_Score=82, Evalue=3e-16, Organism=Caenorhabditis elegans, GI193202570, Length=252, Percent_Identity=26.1904761904762, Blast_Score=78, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71995897, Length=252, Percent_Identity=26.5873015873016, Blast_Score=67, Evalue=7e-12, Organism=Caenorhabditis elegans, GI71995905, Length=252, Percent_Identity=26.5873015873016, Blast_Score=67, Evalue=8e-12, Organism=Saccharomyces cerevisiae, GI6320493, Length=201, Percent_Identity=30.8457711442786, Blast_Score=73, Evalue=4e-14, Organism=Drosophila melanogaster, GI24664922, Length=265, Percent_Identity=25.6603773584906, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI24664926, Length=202, Percent_Identity=27.7227722772277, Blast_Score=66, Evalue=2e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006240 - InterPro: IPR020583 - InterPro: IPR000760 - InterPro: IPR020550 [H]
Pfam domain/function: PF00459 Inositol_P [H]
EC number: =3.1.3.7 [H]
Molecular weight: Translated: 29870; Mature: 29870
Theoretical pI: Translated: 4.52; Mature: 4.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPEELIDEVIAIATDAGITIRDIYLKGNFEREMKSDNTPVTSADLAANKIICDRLTALT CCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC PDIPVLSEEAADIPLSVRESWKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVV CCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEE YVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIEHREKVSLRLAVSRRQDPQSVLTLFNH ECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCC PKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIVEEAGGQLMDTELQPL CCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCC TYNERETLENPNFIVVGAPNLEWDKILIGE CCCHHHHCCCCCEEEEECCCCCCCEEEECC >Mature Secondary Structure MKPEELIDEVIAIATDAGITIRDIYLKGNFEREMKSDNTPVTSADLAANKIICDRLTALT CCHHHHHHHHHHHHCCCCCEEEEEEEECCCHHHHCCCCCCCCCHHHHHHHHHHHHHHHCC PDIPVLSEEAADIPLSVRESWKRYWLVDPLDGTGEFIAGSGDFSVIIALVEHNRPVMGVV CCCCCCCCCCCCCCHHHHHCCCEEEEECCCCCCCCEEECCCCCEEEEEEEECCCCEEEEE YVPMTQVCYYAIAGLGAYKRTDKQEVRISSRQIEHREKVSLRLAVSRRQDPQSVLTLFNH ECCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCCHHHHHHHHCC PKHCELVVMGGAALKSCLVAEGRADCYVRVGPTGEWDTGAAQIIVEEAGGQLMDTELQPL CCCEEEEEECCHHHHHHHHCCCCCCEEEEECCCCCCCCCCEEEEEECCCCCEECCCCCCC TYNERETLENPNFIVVGAPNLEWDKILIGE CCCHHHHCCCCCEEEEECCCCCCCEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9020051 [H]