Definition | Shewanella baltica OS195 chromosome, complete genome. |
---|---|
Accession | NC_009997 |
Length | 5,347,283 |
Click here to switch to the map view.
The map label for this gene is exeN [H]
Identifier: 160873289
GI number: 160873289
Start: 191042
End: 191803
Strand: Direct
Name: exeN [H]
Synonym: Sbal195_0163
Alternate gene names: 160873289
Gene position: 191042-191803 (Clockwise)
Preceding gene: 160873288
Following gene: 160873291
Centisome position: 3.57
GC content: 46.06
Gene sequence:
>762_bases GTGAGTTTGATAAAAAAAGTCATCATAGGCGTACTGATTTATTTAGTATTTTTAGTCGTTCTATTTCCCGCTAAGATTGC GATAGCGTTAGCGCCATTACCTGCAAATATCAGTGTTTCGGGTGTGAGCGGCAGTATTTGGTCTGGCAACATAGAAACCT TAAGTATGCCGCAACGCCAGTTAGAACAAGTGCGTTGGGATCTGAGTCCTTGGGCCTTGTTGTTAGGTAAAGTGAAAGTT GATTTTCAAGTGGGCAGCCGCGCCACACCTGTCAGCGCTAAGGGATTAGTCTCTTGGTCCATGGGCGGCTTAAGTGCGCA GGGTTTACGTTTCGAAGCGCCAGATAGCTTTTTACTCGGCAATGCAAAACTGCCCTTTAAAACCGAAATCTCCGGTGAAG TTAGCCTATTAGTCGAGACGTTAGAGCAAGGTAAACCTTGGTGCGAGCAGTTGTCTGGTAAGCTGTTTTTGAATCAAACC AATGTTAAAAACCAGTTTGGCAATTATCCACTAGGCAATATCGAACTTGGCCTGAGTTGCGTTGATGGCAAAGCGCAATT AGCCACAGATGAAGCCAAAAACCAGCTAGGGATCGTCGGCACCTTGCAGTTAGACGAAGGCAATATGGTGAAGGTTGCGG CTAAGATTAAAGAAACGGCTGAGCAACCAGAAGATATGCGTAAGTCACTGGGTATGCTAGGTAAACGCGGCAGCGACGGT TATTTCCCTGTGGTATATCAGGGTCGTATTCCTGGGTTATAG
Upstream 100 bases:
>100_bases AAGGACTATCACTCGAAAGTGTTGATTTGGCAGAGGCCGATGCCCCTGGCTATGTCAAAGTTAGACGTATCCAACTGTCG CAATAAATTAAGGTGTAGCT
Downstream 100 bases:
>100_bases TGCTGTTTCAGCGCGCGATGATAGATCTGCATTATGATGAAACGAAGGCACCTTAGGTGCCTTTTTTATTGTCTTTTTAT CGTGTTAGATCATTGAGTAG
Product: type II secretion system protein N
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 253; Mature: 252
Protein sequence:
>253_residues MSLIKKVIIGVLIYLVFLVVLFPAKIAIALAPLPANISVSGVSGSIWSGNIETLSMPQRQLEQVRWDLSPWALLLGKVKV DFQVGSRATPVSAKGLVSWSMGGLSAQGLRFEAPDSFLLGNAKLPFKTEISGEVSLLVETLEQGKPWCEQLSGKLFLNQT NVKNQFGNYPLGNIELGLSCVDGKAQLATDEAKNQLGIVGTLQLDEGNMVKVAAKIKETAEQPEDMRKSLGMLGKRGSDG YFPVVYQGRIPGL
Sequences:
>Translated_253_residues MSLIKKVIIGVLIYLVFLVVLFPAKIAIALAPLPANISVSGVSGSIWSGNIETLSMPQRQLEQVRWDLSPWALLLGKVKV DFQVGSRATPVSAKGLVSWSMGGLSAQGLRFEAPDSFLLGNAKLPFKTEISGEVSLLVETLEQGKPWCEQLSGKLFLNQT NVKNQFGNYPLGNIELGLSCVDGKAQLATDEAKNQLGIVGTLQLDEGNMVKVAAKIKETAEQPEDMRKSLGMLGKRGSDG YFPVVYQGRIPGL >Mature_252_residues SLIKKVIIGVLIYLVFLVVLFPAKIAIALAPLPANISVSGVSGSIWSGNIETLSMPQRQLEQVRWDLSPWALLLGKVKVD FQVGSRATPVSAKGLVSWSMGGLSAQGLRFEAPDSFLLGNAKLPFKTEISGEVSLLVETLEQGKPWCEQLSGKLFLNQTN VKNQFGNYPLGNIELGLSCVDGKAQLATDEAKNQLGIVGTLQLDEGNMVKVAAKIKETAEQPEDMRKSLGMLGKRGSDGY FPVVYQGRIPGL
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell inner membrane (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP N family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR022792 - InterPro: IPR000645 [H]
Pfam domain/function: PF01203 GSPII_N [H]
EC number: NA
Molecular weight: Translated: 27271; Mature: 27140
Theoretical pI: Translated: 9.07; Mature: 9.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLIKKVIIGVLIYLVFLVVLFPAKIAIALAPLPANISVSGVSGSIWSGNIETLSMPQRQ CHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCEECCCCEEECCCHHH LEQVRWDLSPWALLLGKVKVDFQVGSRATPVSAKGLVSWSMGGLSAQGLRFEAPDSFLLG HHHHHCCCCHHHHHHEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCEEEC NAKLPFKTEISGEVSLLVETLEQGKPWCEQLSGKLFLNQTNVKNQFGNYPLGNIELGLSC CCCCCEEECCCCHHHHHHHHHHCCCCHHHHCCCEEEEEECCCHHHCCCCCCCCEEEEEEE VDGKAQLATDEAKNQLGIVGTLQLDEGNMVKVAAKIKETAEQPEDMRKSLGMLGKRGSDG ECCCCCCCCHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCC YFPVVYQGRIPGL CEEEEEECCCCCC >Mature Secondary Structure SLIKKVIIGVLIYLVFLVVLFPAKIAIALAPLPANISVSGVSGSIWSGNIETLSMPQRQ HHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCEEEECCCCCEECCCCEEECCCHHH LEQVRWDLSPWALLLGKVKVDFQVGSRATPVSAKGLVSWSMGGLSAQGLRFEAPDSFLLG HHHHHCCCCHHHHHHEEEEEEEEECCCCCCCCCCCEEEECCCCCCCCCEEEECCCCEEEC NAKLPFKTEISGEVSLLVETLEQGKPWCEQLSGKLFLNQTNVKNQFGNYPLGNIELGLSC CCCCCEEECCCCHHHHHHHHHHCCCCHHHHCCCEEEEEECCCHHHCCCCCCCCEEEEEEE VDGKAQLATDEAKNQLGIVGTLQLDEGNMVKVAAKIKETAEQPEDMRKSLGMLGKRGSDG ECCCCCCCCHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHCCHHHHHHHHHHHCCCCCCC YFPVVYQGRIPGL CEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]