Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is exeJ [H]
Identifier: 160873285
GI number: 160873285
Start: 187496
End: 188275
Strand: Direct
Name: exeJ [H]
Synonym: Sbal195_0159
Alternate gene names: 160873285
Gene position: 187496-188275 (Clockwise)
Preceding gene: 160873284
Following gene: 160873286
Centisome position: 3.51
GC content: 50.26
Gene sequence:
>780_bases ATGTCCTTAAAACTGACTAGTGTGCAGCGGGGATTTACCCTGCTAGAAATGCTGATCGCCATCGCGATTTTCGCCATGAT AGGTTTGGCTTCTAATGCCGTGCTCAGCACTGTGCTGACTAACGATGAAGTGACGCGCACTTTCTCTACTCGGCTTAAGG CCCTGCAGCAAGGCTTTGGTGCGATTGAGCGTGATCTCGCCCAAATGGTGGCGCGTACACCCAGATTACTCGAAGGGGGT CGAGGTTCGACCGTCTTCCAAACGGGCAATGATATCTTAGACTCGGAATCAGAAGCCTTAGTGTTTTACCGTTTAGGTTG GTTAAATCCCGACGGTTTATTACCGCGGGGCAGCTTACAGTCTGTGGCGTATGTGGTGCACGAAGGGAGACTGGAGCGTT GGTATTTTCCTTATCCTGAGCCTGAATTTGGTGCCGAGCCGATTAAGACAGTGGTCATAGATAAAGTATTGTCGGTGGAA TATTCCTTCTTTATGGATGACAAATGGGAGCGCAAAGTCGAGGCGACTAAGTTGCCTAAAGCGATCGCCATGGAAATTGA GATTGAAGGCTTAGGCAAGATCCAACGTAAGTTCTTGCTGCCGCTAGGTGCTGCCGCACCAGACAAGTCCAAGGATGAAG ACAATAAAGACGAAAATCCAGACGATGCTAACAAAGATAAAAACGGCTCAGGTAACGGCAATGGAACTGGCAATGGTTCC GGCAACCCAGATTCTGGCGATTCCGGAGACGGCGATCCAGACGCAGAGGGCCGCGAATGA
Upstream 100 bases:
>100_bases AAAGAAGTGGTGAAAACCACGGACGATAATTTTCGCATGATCCGGATTAGCGTGAGTGAAGACGAACGATATCAGCGTAT TGCAGCACAAGTGAGCAGTT
Downstream 100 bases:
>100_bases GAACCCAATCTCGGTCTAAACAGCGCGGCGTTGCACTGATCGTCGTGCTCTTGATTGTGGCTATGGTGGTGATCATCGCG ACAAACATCACTGGCCGTAA
Product: general secretion pathway protein J
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 259; Mature: 258
Protein sequence:
>259_residues MSLKLTSVQRGFTLLEMLIAIAIFAMIGLASNAVLSTVLTNDEVTRTFSTRLKALQQGFGAIERDLAQMVARTPRLLEGG RGSTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQSVAYVVHEGRLERWYFPYPEPEFGAEPIKTVVIDKVLSVE YSFFMDDKWERKVEATKLPKAIAMEIEIEGLGKIQRKFLLPLGAAAPDKSKDEDNKDENPDDANKDKNGSGNGNGTGNGS GNPDSGDSGDGDPDAEGRE
Sequences:
>Translated_259_residues MSLKLTSVQRGFTLLEMLIAIAIFAMIGLASNAVLSTVLTNDEVTRTFSTRLKALQQGFGAIERDLAQMVARTPRLLEGG RGSTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQSVAYVVHEGRLERWYFPYPEPEFGAEPIKTVVIDKVLSVE YSFFMDDKWERKVEATKLPKAIAMEIEIEGLGKIQRKFLLPLGAAAPDKSKDEDNKDENPDDANKDKNGSGNGNGTGNGS GNPDSGDSGDGDPDAEGRE >Mature_258_residues SLKLTSVQRGFTLLEMLIAIAIFAMIGLASNAVLSTVLTNDEVTRTFSTRLKALQQGFGAIERDLAQMVARTPRLLEGGR GSTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQSVAYVVHEGRLERWYFPYPEPEFGAEPIKTVVIDKVLSVEY SFFMDDKWERKVEATKLPKAIAMEIEIEGLGKIQRKFLLPLGAAAPDKSKDEDNKDENPDDANKDKNGSGNGNGTGNGSG NPDSGDSGDGDPDAEGRE
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins. Required for the translocation of the multiple pectic enzymes [H]
COG id: COG4795
COG function: function code U; Type II secretory pathway, component PulJ
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP J family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR010055 - InterPro: IPR012902 - InterPro: IPR001120 [H]
Pfam domain/function: PF07963 N_methyl [H]
EC number: NA
Molecular weight: Translated: 28244; Mature: 28113
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: PS00409 PROKAR_NTER_METHYL
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKLTSVQRGFTLLEMLIAIAIFAMIGLASNAVLSTVLTNDEVTRTFSTRLKALQQGFG CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AIERDLAQMVARTPRLLEGGRGSTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQ HHHHHHHHHHHHCHHHHCCCCCCEEEECCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHH SVAYVVHEGRLERWYFPYPEPEFGAEPIKTVVIDKVLSVEYSFFMDDKWERKVEATKLPK HHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC AIAMEIEIEGLGKIQRKFLLPLGAAAPDKSKDEDNKDENPDDANKDKNGSGNGNGTGNGS EEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNPDSGDSGDGDPDAEGRE CCCCCCCCCCCCCCCCCCC >Mature Secondary Structure SLKLTSVQRGFTLLEMLIAIAIFAMIGLASNAVLSTVLTNDEVTRTFSTRLKALQQGFG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AIERDLAQMVARTPRLLEGGRGSTVFQTGNDILDSESEALVFYRLGWLNPDGLLPRGSLQ HHHHHHHHHHHHCHHHHCCCCCCEEEECCCHHHCCCCCEEEEEEECCCCCCCCCCCCHHH SVAYVVHEGRLERWYFPYPEPEFGAEPIKTVVIDKVLSVEYSFFMDDKWERKVEATKLPK HHHHHHHCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCC AIAMEIEIEGLGKIQRKFLLPLGAAAPDKSKDEDNKDENPDDANKDKNGSGNGNGTGNGS EEEEEEEECCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GNPDSGDSGDGDPDAEGRE CCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]