Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is exeH [H]
Identifier: 160873283
GI number: 160873283
Start: 186546
End: 187160
Strand: Direct
Name: exeH [H]
Synonym: Sbal195_0157
Alternate gene names: 160873283
Gene position: 186546-187160 (Clockwise)
Preceding gene: 160873282
Following gene: 160873284
Centisome position: 3.49
GC content: 48.13
Gene sequence:
>615_bases ATGACATCGGTAACTGGAATTTACAGAATTTCCAATAAGATGCTAAAGCTGCGCCACGCTGGTTTCACCTTAATGGAGGT GATGCTAGTGATCTTGTTGATGGGACTCACGGCAGCGGCCGTGACTATGTCTATCGGTAACTCGGGCCCACAACAGGCCT TAGATAGAACGGCGCGGCAGTTTATCGCTGCCACTGAAATGGTGCTCGATGAGACCGTTTTGAGTGGCCAATTTATTGGT ATTGTGATTGAGAAAACCAGTTATCAGTTTGTTTTTTATAAAGACGGTAAGTGGGAGCCTTTGGATAAAGACAGGCTCTT GTCTGAAAAGCAGATGGAGCCGGGTGTCGTGATGAACTTAGTGCTCGATGGTTTGCCTTTGGTACAAGACGATGAAGAAG ACGATTCTTGGTTTGAAGAACCACTGATTGAGCCTTCTGCCGATGACAAGAAGAAACATCCTGAGCCACAGGTCATGCTA TTCCCGAGCGGTGAAATGAGCGCTTTTGAGCTGACGTTTATCACCAAAACTGACAAAGGTCAGCAGGCCGAAGCGTTAGT GGTCGGCGATGCGCTGGGCAGATTAACTATAGGGCGCCCCGATGAAACGCGCTAA
Upstream 100 bases:
>100_bases GAAGATCCATGGCGCAATAAGTACTTGCTGTTAAGCCCTGGCGAAAACGGCAAGCTAGATATATTCACTGCAGGCCCAGA TGGTCAACCAGGTACCGAAG
Downstream 100 bases:
>100_bases GGGCATGACGTTACTCGAAGTGATTGTGGCCCTTGCCGTTTTTTCGATTGCGGCTGTGTCGATCACTAAAAGTTTGGGCG AGCAGATGGCCAACATGCCA
Product: general secretion pathway protein H
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 204; Mature: 203
Protein sequence:
>204_residues MTSVTGIYRISNKMLKLRHAGFTLMEVMLVILLMGLTAAAVTMSIGNSGPQQALDRTARQFIAATEMVLDETVLSGQFIG IVIEKTSYQFVFYKDGKWEPLDKDRLLSEKQMEPGVVMNLVLDGLPLVQDDEEDDSWFEEPLIEPSADDKKKHPEPQVML FPSGEMSAFELTFITKTDKGQQAEALVVGDALGRLTIGRPDETR
Sequences:
>Translated_204_residues MTSVTGIYRISNKMLKLRHAGFTLMEVMLVILLMGLTAAAVTMSIGNSGPQQALDRTARQFIAATEMVLDETVLSGQFIG IVIEKTSYQFVFYKDGKWEPLDKDRLLSEKQMEPGVVMNLVLDGLPLVQDDEEDDSWFEEPLIEPSADDKKKHPEPQVML FPSGEMSAFELTFITKTDKGQQAEALVVGDALGRLTIGRPDETR >Mature_203_residues TSVTGIYRISNKMLKLRHAGFTLMEVMLVILLMGLTAAAVTMSIGNSGPQQALDRTARQFIAATEMVLDETVLSGQFIGI VIEKTSYQFVFYKDGKWEPLDKDRLLSEKQMEPGVVMNLVLDGLPLVQDDEEDDSWFEEPLIEPSADDKKKHPEPQVMLF PSGEMSAFELTFITKTDKGQQAEALVVGDALGRLTIGRPDETR
Specific function: Involved in a general secretion pathway (GSP) for the export of proteins [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GSP H family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002416 - InterPro: IPR012902 - InterPro: IPR001120 - InterPro: IPR022346 [H]
Pfam domain/function: PF12019 GspH [H]
EC number: NA
Molecular weight: Translated: 22714; Mature: 22582
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.9 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTSVTGIYRISNKMLKLRHAGFTLMEVMLVILLMGLTAAAVTMSIGNSGPQQALDRTARQ CCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FIAATEMVLDETVLSGQFIGIVIEKTSYQFVFYKDGKWEPLDKDRLLSEKQMEPGVVMNL HHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHH VLDGLPLVQDDEEDDSWFEEPLIEPSADDKKKHPEPQVMLFPSGEMSAFELTFITKTDKG HHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCEEEEECCCCCEEEEEEEEECCCC QQAEALVVGDALGRLTIGRPDETR CCCCEEEEECCCCCEEECCCCCCC >Mature Secondary Structure TSVTGIYRISNKMLKLRHAGFTLMEVMLVILLMGLTAAAVTMSIGNSGPQQALDRTARQ CCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHH FIAATEMVLDETVLSGQFIGIVIEKTSYQFVFYKDGKWEPLDKDRLLSEKQMEPGVVMNL HHHHHHHHHHHHHHCCEEEEEEEECCCEEEEEEECCCCCCCCHHHHHHHHCCCCCHHHHH VLDGLPLVQDDEEDDSWFEEPLIEPSADDKKKHPEPQVMLFPSGEMSAFELTFITKTDKG HHCCCCCCCCCCCCHHHHHCCCCCCCCCCHHCCCCCCEEEEECCCCCEEEEEEEEECCCC QQAEALVVGDALGRLTIGRPDETR CCCCEEEEECCCCCEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8407845 [H]