Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873268
Identifier: 160873268
GI number: 160873268
Start: 167573
End: 168106
Strand: Direct
Name: 160873268
Synonym: Sbal195_0142
Alternate gene names: NA
Gene position: 167573-168106 (Clockwise)
Preceding gene: 160873267
Following gene: 160873269
Centisome position: 3.13
GC content: 34.83
Gene sequence:
>534_bases ATGCGTACTATAAAAATAATGTGTGTCATTAAGGAAATGAGAGCTTTGCCAACAATTAACGAAATAAAAGAAGAAGCATT TAAGCTCCGAGGATTAATTGATAAGTGTGAAAAATCGAACATGAAACTTGTGATTGATTGTTTCCCTATTATGAGTTGCA AATTATCATCGATGCTTTTGTCTTATCATTTTCTTGAGGTATGGCAGCAGCTTGAAGTGAAGGGCGTTAGTGCTGCTACT GGGATAGGCGATCAAATAACGCACTATTGGTTAGAAATTGACGAAGTTGCAATTGATATTACAGGAGATCAATATAACTT CATAAAAAACAGTGAACTAAATAATAAAATTGTAAAAAACCGTCCCTTTGAAGCCGTGCACGTTTCTCTTAAAAACGAAA GCTATCTTTATAACTTATTCAGGGTTAGGGGAAGTGAGCTTCTTGTGTACGGTTTTCCTACAATTGGCGAAGATTTTATT GAAGATATGAAGCATGATTACAGTCTGCTTCTGAATCAGATTGCATGTATATGA
Upstream 100 bases:
>100_bases TGCATTACATTTATAGTCAATAGTTTATTTTTAAAGGTGTAGGTAACGGTTTCGGCAACCGTGAGAGCAGTGTGTCACGG CTCTTACAATATAAGTGCAC
Downstream 100 bases:
>100_bases TAAATTTCAGGTAACACCTACTGGACATTCGAATTTGGCGTTAGGGTGAGTTTGTAACTTGCTGAGGATGACTGTTCGGA CAATTATTTAGTTTTGTGTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 177; Mature: 177
Protein sequence:
>177_residues MRTIKIMCVIKEMRALPTINEIKEEAFKLRGLIDKCEKSNMKLVIDCFPIMSCKLSSMLLSYHFLEVWQQLEVKGVSAAT GIGDQITHYWLEIDEVAIDITGDQYNFIKNSELNNKIVKNRPFEAVHVSLKNESYLYNLFRVRGSELLVYGFPTIGEDFI EDMKHDYSLLLNQIACI
Sequences:
>Translated_177_residues MRTIKIMCVIKEMRALPTINEIKEEAFKLRGLIDKCEKSNMKLVIDCFPIMSCKLSSMLLSYHFLEVWQQLEVKGVSAAT GIGDQITHYWLEIDEVAIDITGDQYNFIKNSELNNKIVKNRPFEAVHVSLKNESYLYNLFRVRGSELLVYGFPTIGEDFI EDMKHDYSLLLNQIACI >Mature_177_residues MRTIKIMCVIKEMRALPTINEIKEEAFKLRGLIDKCEKSNMKLVIDCFPIMSCKLSSMLLSYHFLEVWQQLEVKGVSAAT GIGDQITHYWLEIDEVAIDITGDQYNFIKNSELNNKIVKNRPFEAVHVSLKNESYLYNLFRVRGSELLVYGFPTIGEDFI EDMKHDYSLLLNQIACI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20476; Mature: 20476
Theoretical pI: Translated: 5.68; Mature: 5.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 6.8 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 6.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTIKIMCVIKEMRALPTINEIKEEAFKLRGLIDKCEKSNMKLVIDCFPIMSCKLSSMLL CCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH SYHFLEVWQQLEVKGVSAATGIGDQITHYWLEIDEVAIDITGDQYNFIKNSELNNKIVKN HHHHHHHHHHHHHCCCCHHCCCCHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCHHHCC RPFEAVHVSLKNESYLYNLFRVRGSELLVYGFPTIGEDFIEDMKHDYSLLLNQIACI CCCEEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MRTIKIMCVIKEMRALPTINEIKEEAFKLRGLIDKCEKSNMKLVIDCFPIMSCKLSSMLL CCEEEEHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHH SYHFLEVWQQLEVKGVSAATGIGDQITHYWLEIDEVAIDITGDQYNFIKNSELNNKIVKN HHHHHHHHHHHHHCCCCHHCCCCHHHHHHHEEEEEEEEEEECCCCCCCCCCCCCCHHHCC RPFEAVHVSLKNESYLYNLFRVRGSELLVYGFPTIGEDFIEDMKHDYSLLLNQIACI CCCEEEEEEECCCHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA