Click here to switch to the map view.

The map label for this gene is yedE [H]

Identifier: 160873238

GI number: 160873238

Start: 134961

End: 136175

Strand: Direct

Name: yedE [H]

Synonym: Sbal195_0112

Alternate gene names: 160873238

Gene position: 134961-136175 (Clockwise)

Preceding gene: 160873237

Following gene: 160873239

Centisome position: 2.52

GC content: 49.63

Gene sequence:

>1215_bases
ATGACATGGCAACAATTTAAACAAGAATACTTAGTTCGTTTTTGGGCTCCTATGCCAGCGGTGATCGCTGCGGGTATCCT
TTCTACTTACTATTTTGGTCTGACTGGAACCTTCTGGGCTGTTACTGGGGAATTCACTCGTTGGGGCGGGCACTTGATGC
AGCTTTTTGGCGCAGAGCCTGAAACCTGGGGATATTTCAAAGTGATAGGTCTGCAGGGGTCTCCTTTAGATCGTATCGAC
GGCATGATGATTATCGGTATGTTTGGTGGTTGTATTGCTGCTGCGCTCTGGGCCAATAACGTCAAACTGCGTATGCCACA
GAGCCGTATCCGTATTGCTCAGGCGCTGATCGGCGGCATTATTGCTGGCTTTGGTGCCCGCTTGGCTATGGGTTGTAACT
TAGCGGCCTTCTTCACGGGTATTCCGCAGTTCTCTTTGCATGCTTGGTTCTTTGCTCTGGCGACCGCTGCGGGCTCTTAC
TTTGGCGCAAGGTTTACCTTACTGCCTATGTTCCGTATCCCGGTAAAGCTGAAGAAGGTAAATAAAGCGACTTCGATTAA
GCAGGATGAAAATCAGGCTCGACGTCGTTTCCGCATCGGTATGTTAGTGTTTGTCGGCATCGTCGGTTGGGGCTTATTGA
CTATGTTCAATGCGCCTAAACTCGGCATAGCTATGCTTTGCGGAGTCGGATTTGGTCTGTTAATTGAACGGGCGCAAATC
TGCTTTACCTCAGCGTTCCGCGATATGTGGATCACTGGTCGAACTCACATGGCTAAGGCGATTATTCTAGGTATGGCGGT
GAGTGCTATCGGGATTTATAGCTATGTGCAATTAGGCGTGCCCCCCAAAATCATGTGGGCGGGTCCTAATGCGGTGATCG
GTGGCTTACTGTTTGGTTTTGGTATTGTGCTTGCTGGTGGTTGTGAAACGGGCTGGATGTACCGTGCAGTTGAAGGCCAA
GTGCATTTCTGGTGGGTCGGTTTAGGCAACGTGTTAGGTTCGACTTTACTGGCGTATTACTGGGATGACTTAGCTCAACC
CTTAGCGACCAACTGGGACAAAGTGAATTTATTAACCAGCTTTGGTGATAGGGGCGGCTTATTGCTGACCTATGTGCTGC
TGGGACTTTCCTTTGGCGCTATGTTGCTATGGGAAAAACGTTTCTTTGCTCGTAAGGCGAAGCGTGATGAACAATTGCTA
GCGGAGGCGGCGTAA

Upstream 100 bases:

>100_bases
TAAGATTGGCGTTGTATATAACGACCTCAATCGCTGTGGCATAAAGGTTATAAGCGCATTGTGCTTATTTTTTTATAGTC
TCGTTCATTAGGGTAATGAC

Downstream 100 bases:

>100_bases
TGAATCAATATGTTCCAGATTATCAACTCGATATGGTCGGTGAACCTTGCCCTTATCCTGCAGTGGCCACCCTTGAAGCT
ATGCCTAAGTTAAAGCCCGG

Product: putative inner membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 404; Mature: 403

Protein sequence:

>404_residues
MTWQQFKQEYLVRFWAPMPAVIAAGILSTYYFGLTGTFWAVTGEFTRWGGHLMQLFGAEPETWGYFKVIGLQGSPLDRID
GMMIIGMFGGCIAAALWANNVKLRMPQSRIRIAQALIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSY
FGARFTLLPMFRIPVKLKKVNKATSIKQDENQARRRFRIGMLVFVGIVGWGLLTMFNAPKLGIAMLCGVGFGLLIERAQI
CFTSAFRDMWITGRTHMAKAIILGMAVSAIGIYSYVQLGVPPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQ
VHFWWVGLGNVLGSTLLAYYWDDLAQPLATNWDKVNLLTSFGDRGGLLLTYVLLGLSFGAMLLWEKRFFARKAKRDEQLL
AEAA

Sequences:

>Translated_404_residues
MTWQQFKQEYLVRFWAPMPAVIAAGILSTYYFGLTGTFWAVTGEFTRWGGHLMQLFGAEPETWGYFKVIGLQGSPLDRID
GMMIIGMFGGCIAAALWANNVKLRMPQSRIRIAQALIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSY
FGARFTLLPMFRIPVKLKKVNKATSIKQDENQARRRFRIGMLVFVGIVGWGLLTMFNAPKLGIAMLCGVGFGLLIERAQI
CFTSAFRDMWITGRTHMAKAIILGMAVSAIGIYSYVQLGVPPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQ
VHFWWVGLGNVLGSTLLAYYWDDLAQPLATNWDKVNLLTSFGDRGGLLLTYVLLGLSFGAMLLWEKRFFARKAKRDEQLL
AEAA
>Mature_403_residues
TWQQFKQEYLVRFWAPMPAVIAAGILSTYYFGLTGTFWAVTGEFTRWGGHLMQLFGAEPETWGYFKVIGLQGSPLDRIDG
MMIIGMFGGCIAAALWANNVKLRMPQSRIRIAQALIGGIIAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSYF
GARFTLLPMFRIPVKLKKVNKATSIKQDENQARRRFRIGMLVFVGIVGWGLLTMFNAPKLGIAMLCGVGFGLLIERAQIC
FTSAFRDMWITGRTHMAKAIILGMAVSAIGIYSYVQLGVPPKIMWAGPNAVIGGLLFGFGIVLAGGCETGWMYRAVEGQV
HFWWVGLGNVLGSTLLAYYWDDLAQPLATNWDKVNLLTSFGDRGGLLLTYVLLGLSFGAMLLWEKRFFARKAKRDEQLLA
EAA

Specific function: Unknown

COG id: COG2391

COG function: function code R; Predicted transporter component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0394 family [H]

Homologues:

Organism=Escherichia coli, GI1788238, Length=401, Percent_Identity=79.3017456359102, Blast_Score=630, Evalue=0.0,
Organism=Escherichia coli, GI1788323, Length=102, Percent_Identity=40.1960784313725, Blast_Score=80, Evalue=3e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007272 [H]

Pfam domain/function: PF04143 DUF395 [H]

EC number: NA

Molecular weight: Translated: 44532; Mature: 44401

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
5.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTWQQFKQEYLVRFWAPMPAVIAAGILSTYYFGLTGTFWAVTGEFTRWGGHLMQLFGAEP
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
ETWGYFKVIGLQGSPLDRIDGMMIIGMFGGCIAAALWANNVKLRMPQSRIRIAQALIGGI
CCCCEEEEEECCCCCHHHHCCEEHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSYFGARFTLLPMFRIPVKLKKV
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH
NKATSIKQDENQARRRFRIGMLVFVGIVGWGLLTMFNAPKLGIAMLCGVGFGLLIERAQI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
CFTSAFRDMWITGRTHMAKAIILGMAVSAIGIYSYVQLGVPPKIMWAGPNAVIGGLLFGF
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
GIVLAGGCETGWMYRAVEGQVHFWWVGLGNVLGSTLLAYYWDDLAQPLATNWDKVNLLTS
HHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
FGDRGGLLLTYVLLGLSFGAMLLWEKRFFARKAKRDEQLLAEAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC
>Mature Secondary Structure 
TWQQFKQEYLVRFWAPMPAVIAAGILSTYYFGLTGTFWAVTGEFTRWGGHLMQLFGAEP
CHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHCCCC
ETWGYFKVIGLQGSPLDRIDGMMIIGMFGGCIAAALWANNVKLRMPQSRIRIAQALIGGI
CCCCEEEEEECCCCCHHHHCCEEHHHHHHHHHHHHHHHCCCEEECCHHHHHHHHHHHHHH
IAGFGARLAMGCNLAAFFTGIPQFSLHAWFFALATAAGSYFGARFTLLPMFRIPVKLKKV
HHHHHHHHHHCCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHH
NKATSIKQDENQARRRFRIGMLVFVGIVGWGLLTMFNAPKLGIAMLCGVGFGLLIERAQI
HHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHH
CFTSAFRDMWITGRTHMAKAIILGMAVSAIGIYSYVQLGVPPKIMWAGPNAVIGGLLFGF
HHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCHHHHHHHHHHH
GIVLAGGCETGWMYRAVEGQVHFWWVGLGNVLGSTLLAYYWDDLAQPLATNWDKVNLLTS
HHHEECCCCCCCEEEEECCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCEEHHHH
FGDRGGLLLTYVLLGLSFGAMLLWEKRFFARKAKRDEQLLAEAA
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8371104; 9097040; 9278503 [H]