Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is hutH [H]
Identifier: 160873229
GI number: 160873229
Start: 122618
End: 124159
Strand: Direct
Name: hutH [H]
Synonym: Sbal195_0103
Alternate gene names: 160873229
Gene position: 122618-124159 (Clockwise)
Preceding gene: 160873228
Following gene: 160873230
Centisome position: 2.29
GC content: 51.69
Gene sequence:
>1542_bases ATGAAATCTGTGAATCACTTAGTGTTAACGCCGGGCAGCTTGAGCCTAGCGCAATTACGCGAAATCAGCCGTCATAAGCT AACACTCGAACTCGCGCCAGAGGCCATTACTGACATCAACACCAGCGCGCAAATCGTGCAAAAAGTGCTGGATGAAGGCC GTACCGTTTACGGCATCAACACAGGTTTTGGCTTGTTGGCCAATACCAAGATAGCGCCCGAAGATCTGCAATTGCTGCAA CGCTCAATCGTGTTGTCGCACGCCGCTGGCACGGGCCAATACATGCAAGACGCCACAGTGCGCTTGATGATGGTGTTAAA AATCAATTCATTAAGCCGTGGTTTTTCAGGCATTCGTTTAGAAGTGATTAACTTTTTAATCAGTTTAGTGAACGCCGAAG TCTATCCCTGCGTGCCAGAAAAAGGTTCAGTCGGCGCCTCGGGTGACTTAGCGCCACTGGCGCACATGTGTTTGCCTATG CTGGGTGAAGGCGAAATGAGCTATCGAGGTGAGTTAATTTCTGCCGCCGAAGGTTTAGAAATCGCCGGCCTTAAGCCAAT CGATTTAGCGGCTAAAGAAGGGCTCGCTTTGCTTAACGGCACGCAAGCCTCGACTGCGCTAGCGCTGGAAGGGTTATTCC ACGCTGAAGACTTGTTTGCGGCGAGTTCTGTGGTCGGTGCCATGAGTGTCGAAGCCGCTATGGGTAGCCGTAGCCCATTC GATCCACGTATCCATGCGGCGCGCGGCCAAAAAGGTCAAATCGATTCGGCCATGATTTTCCGTCATCTATTGGGCGAAGA GTCTGAGATCAGCTTAAGTCACGCTAACTGTGAAAAGGTGCAAGATCCTTACTCACTGCGCTGTCAGCCACAGGTGTTGG GTGCTTGTTTAACGCAAATTCGCCATGCGGCCGATGTGTTAGGCACTGAAGCCAACGGCGTAACCGATAACCCACTGGTG TTCCAAGACACTGGCGATATCATTTCGGGCGGTAACTTCCACGCTGAACCTGTGGCTATGGCGGCGGATAATCTGGCGAT TGCGATTGCCGAACTGGGTTCTATTGCCGAGCGTCGTATCGCACTGTTAATTGATTCTAGCCTGTCGAAACTGCCGCCTT TCCTAGTGAAAAACGGCGGCGTGAACTCAGGCTTTATGATCGCTCAAGTCACTGCGGCAGCTTTAGCATCCGAGAACAAA ACCTACGCCCATCCAGCGTCGGTAGACAGTTTACCGACATCTGCTAACCAAGAAGATCACGTCTCTATGGCGACTTTTGC GGCCCGTCGTTTACGCGATATGAGTGAAAACACTCGTGGTGTGTTAGCCATTGAATTGTTAGCTGCCGCGCAAGGGTTGG ATTTCCGCGCGCCATTAACGCCAAGCGCGGCGGTTGCCAAAGCCAAGGCCGAATTGCGTGAAGTCGTCGCCTATTACGAT AAAGACAGGTACTTCGCACCAGATATCGAAGCCGCGACAGACCTGTTATATACAGCGAGTTTTAACGCTTACCTGCCAGC AGGAACGCTAGCGAGCTTTTAA
Upstream 100 bases:
>100_bases AAAAACTGCGCCAAAGAGCAGGGCCTCGATTTACCTATGCAAGACTAGCCGATGCTAACGACTAAATAACAATAATAACT AAAAGCTTGGAGCTAAAAAT
Downstream 100 bases:
>100_bases GCGTTTTAGCTCCGAGTGAGTAAACGACTAAGCCGTTGTTGACTCGGTTGACTCGGTTGAGTTGGGTGTATTGGGGCGCT TTTGCTGAAATACTCAGGAT
Product: histidine ammonia-lyase
Products: NA
Alternate protein names: Histidase [H]
Number of amino acids: Translated: 513; Mature: 513
Protein sequence:
>513_residues MKSVNHLVLTPGSLSLAQLREISRHKLTLELAPEAITDINTSAQIVQKVLDEGRTVYGINTGFGLLANTKIAPEDLQLLQ RSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFLISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPM LGEGEMSYRGELISAAEGLEIAGLKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVVGAMSVEAAMGSRSPF DPRIHAARGQKGQIDSAMIFRHLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQIRHAADVLGTEANGVTDNPLV FQDTGDIISGGNFHAEPVAMAADNLAIAIAELGSIAERRIALLIDSSLSKLPPFLVKNGGVNSGFMIAQVTAAALASENK TYAHPASVDSLPTSANQEDHVSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSAAVAKAKAELREVVAYYD KDRYFAPDIEAATDLLYTASFNAYLPAGTLASF
Sequences:
>Translated_513_residues MKSVNHLVLTPGSLSLAQLREISRHKLTLELAPEAITDINTSAQIVQKVLDEGRTVYGINTGFGLLANTKIAPEDLQLLQ RSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFLISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPM LGEGEMSYRGELISAAEGLEIAGLKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVVGAMSVEAAMGSRSPF DPRIHAARGQKGQIDSAMIFRHLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQIRHAADVLGTEANGVTDNPLV FQDTGDIISGGNFHAEPVAMAADNLAIAIAELGSIAERRIALLIDSSLSKLPPFLVKNGGVNSGFMIAQVTAAALASENK TYAHPASVDSLPTSANQEDHVSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSAAVAKAKAELREVVAYYD KDRYFAPDIEAATDLLYTASFNAYLPAGTLASF >Mature_513_residues MKSVNHLVLTPGSLSLAQLREISRHKLTLELAPEAITDINTSAQIVQKVLDEGRTVYGINTGFGLLANTKIAPEDLQLLQ RSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRLEVINFLISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPM LGEGEMSYRGELISAAEGLEIAGLKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVVGAMSVEAAMGSRSPF DPRIHAARGQKGQIDSAMIFRHLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQIRHAADVLGTEANGVTDNPLV FQDTGDIISGGNFHAEPVAMAADNLAIAIAELGSIAERRIALLIDSSLSKLPPFLVKNGGVNSGFMIAQVTAAALASENK TYAHPASVDSLPTSANQEDHVSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSAAVAKAKAELREVVAYYD KDRYFAPDIEAATDLLYTASFNAYLPAGTLASF
Specific function: Unknown
COG id: COG2986
COG function: function code E; Histidine ammonia-lyase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the PAL/histidase family [H]
Homologues:
Organism=Homo sapiens, GI4504333, Length=487, Percent_Identity=47.2279260780287, Blast_Score=424, Evalue=1e-119, Organism=Caenorhabditis elegans, GI17567831, Length=505, Percent_Identity=42.970297029703, Blast_Score=379, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005921 - InterPro: IPR008948 - InterPro: IPR001106 - InterPro: IPR022313 [H]
Pfam domain/function: PF00221 PAL [H]
EC number: =4.3.1.3 [H]
Molecular weight: Translated: 54336; Mature: 54336
Theoretical pI: Translated: 5.00; Mature: 5.00
Prosite motif: PS00217 SUGAR_TRANSPORT_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSVNHLVLTPGSLSLAQLREISRHKLTLELAPEAITDINTSAQIVQKVLDEGRTVYGIN CCCCCEEEECCCCCCHHHHHHHHHHEEEEEECCHHHHCCCCHHHHHHHHHHCCCEEEEEC TGFGLLANTKIAPEDLQLLQRSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRL CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEHHHHHCCCCCHHH EVINFLISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPMLGEGEMSYRGELISAAEGLE HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCE IAGLKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVVGAMSVEAAMGSRSPF ECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPRIHAARGQKGQIDSAMIFRHLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQI CCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHH RHAADVLGTEANGVTDNPLVFQDTGDIISGGNFHAEPVAMAADNLAIAIAELGSIAERRI HHHHHHHCCCCCCCCCCCEEEECCCCEECCCCCCCCCHHEECCCCEEEHHHHHHHHHHHE ALLIDSSLSKLPPFLVKNGGVNSGFMIAQVTAAALASENKTYAHPASVDSLPTSANQEDH EEEECCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH VSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSAAVAKAKAELREVVAYYD HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KDRYFAPDIEAATDLLYTASFNAYLPAGTLASF CCCCCCCCHHHHHHHHEEECCCCCCCCCHHCCC >Mature Secondary Structure MKSVNHLVLTPGSLSLAQLREISRHKLTLELAPEAITDINTSAQIVQKVLDEGRTVYGIN CCCCCEEEECCCCCCHHHHHHHHHHEEEEEECCHHHHCCCCHHHHHHHHHHCCCEEEEEC TGFGLLANTKIAPEDLQLLQRSIVLSHAAGTGQYMQDATVRLMMVLKINSLSRGFSGIRL CCCCEEECCCCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHEEEEEEHHHHHCCCCCHHH EVINFLISLVNAEVYPCVPEKGSVGASGDLAPLAHMCLPMLGEGEMSYRGELISAAEGLE HHHHHHHHHHCCCEEECCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHCCCCE IAGLKPIDLAAKEGLALLNGTQASTALALEGLFHAEDLFAASSVVGAMSVEAAMGSRSPF ECCCCCHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC DPRIHAARGQKGQIDSAMIFRHLLGEESEISLSHANCEKVQDPYSLRCQPQVLGACLTQI CCCEECCCCCCCCCHHHHHHHHHHCCCCCEEEECCCHHHCCCCCCCCCCHHHHHHHHHHH RHAADVLGTEANGVTDNPLVFQDTGDIISGGNFHAEPVAMAADNLAIAIAELGSIAERRI HHHHHHHCCCCCCCCCCCEEEECCCCEECCCCCCCCCHHEECCCCEEEHHHHHHHHHHHE ALLIDSSLSKLPPFLVKNGGVNSGFMIAQVTAAALASENKTYAHPASVDSLPTSANQEDH EEEECCHHHHCCCCEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHH VSMATFAARRLRDMSENTRGVLAIELLAAAQGLDFRAPLTPSAAVAKAKAELREVVAYYD HHHHHHHHHHHHHHCCCCCCEEEEEHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHC KDRYFAPDIEAATDLLYTASFNAYLPAGTLASF CCCCCCCCHHHHHHHHEEECCCCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 12368813 [H]