Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is scrK [H]
Identifier: 160873195
GI number: 160873195
Start: 81844
End: 82803
Strand: Direct
Name: scrK [H]
Synonym: Sbal195_0069
Alternate gene names: 160873195
Gene position: 81844-82803 (Clockwise)
Preceding gene: 160873194
Following gene: 160873196
Centisome position: 1.53
GC content: 52.81
Gene sequence:
>960_bases ATGACGGTATTACTCAGTTTCGGTGAGGTGTTAGTAGACTTGCTGCCGACCGATGCCACGGGCAAACATCACCAGCCGAT TGCCGGTGGCGCGCCCGCCAATGTGGCCGTAGGTTACGCGAAACTCGGCGGTAAGAGTTACTTTGCCGGTGGCATCAGCG CCGACCATTATGGCGTTATGTTAAAGCAAGCCTTAGCGGATCAGGGGGTGGCGACCGATTATCTTGCCGAAGTGCCGGGC GCCGCTACCGCGACTGTGCTGGTGAATTTAGATGAACAGGGTGAACGTACCTTTGAGTTCAACCGAAATGGCACAGCCGA TATGCGTTACAGCAATCAGCATTTTGACAATATCCCATGGCAGGGGATTGATATCTTTCACCTTTGCTCGAATACCTTTA CTGAAACCGCCATCTTTAACACTAGCCTTTATGGCGCGCGTTGTGCCAATGCATTCGCGACTTTAGTGAGTTTCGATGTG AACCTGCGTTTATCCCTGTGGCAGGATACGTCTTTACTGGCCGAGCGGGTTGAGCAGTGTTTCCGTTACACCCAAGTGCT GAAAATGAGCCGCGAAGAAGCGGACTATTTAGCGCTGGCGCGGGATAAGAGCTTTGAAGATTATCTGCAGTTCTGCCTCG CCCAAGGGGTTGAGGTGATTTTGGTCACCGATGGCGCCAACCCAGTGCAATGCATCACAGCGCAGCAAAGGTTTAGCGTC CCAGTTCCCAAAATCTCAGCCGTCGATACCACGGCCGCGGGCGACAGTTTTATCTCAGGCTTCCTGTTCGCCTTAGGCTT AGAGCTGGAATACGATTTAGGCAATTTGACCTTGAAACAAAGGCTCGAAAGCAAAGCGCACTTAGAGGCGGCAGTGGTGT TTGCAACACGCTGTGGCGCAATTACCTGCGGGCAAAAAGGCGCATTCCCCTCTTTACCAACACTGGCGCAGGTCAGCTAA
Upstream 100 bases:
>100_bases CTGTTTATACAGAAAAAATGCTAAGCCCAAAACAGCCCATGAAAGTGGGCTTTTTGTCTGATACAAAATGCAGAATATAG AATACAAAGTTGGAGTGAAA
Downstream 100 bases:
>100_bases ACGCAATTGAGTGAACCATAATATCCAAGGCGAGCCTGTTGAGTTTGCCTTGGATTTTTTGTCTTTTAGATTTTCCGCCC GCCATTTTTCAATAGCATAG
Product: ribokinase-like domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 319; Mature: 318
Protein sequence:
>319_residues MTVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVMLKQALADQGVATDYLAEVPG AATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPWQGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDV NLRLSLWQDTSLLAERVEQCFRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV PVPKISAVDTTAAGDSFISGFLFALGLELEYDLGNLTLKQRLESKAHLEAAVVFATRCGAITCGQKGAFPSLPTLAQVS
Sequences:
>Translated_319_residues MTVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVMLKQALADQGVATDYLAEVPG AATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPWQGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDV NLRLSLWQDTSLLAERVEQCFRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV PVPKISAVDTTAAGDSFISGFLFALGLELEYDLGNLTLKQRLESKAHLEAAVVFATRCGAITCGQKGAFPSLPTLAQVS >Mature_318_residues TVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVMLKQALADQGVATDYLAEVPGA ATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPWQGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDVN LRLSLWQDTSLLAERVEQCFRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSVP VPKISAVDTTAAGDSFISGFLFALGLELEYDLGNLTLKQRLESKAHLEAAVVFATRCGAITCGQKGAFPSLPTLAQVS
Specific function: Unknown
COG id: COG0524
COG function: function code G; Sugar kinases, ribokinase family
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbohydrate kinase pfkB family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011611 - InterPro: IPR002173 - InterPro: IPR002139 [H]
Pfam domain/function: PF00294 PfkB [H]
EC number: =2.7.1.4 [H]
Molecular weight: Translated: 34489; Mature: 34358
Theoretical pI: Translated: 4.67; Mature: 4.67
Prosite motif: PS00584 PFKB_KINASES_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVM CEEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEECCCCCCHHHHH LKQALADQGVATDYLAEVPGAATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPW HHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCC QGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDVNLRLSLWQDTSLLAERVEQC CCCHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHH FRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHCCC PVPKISAVDTTAAGDSFISGFLFALGLELEYDLGNLTLKQRLESKAHLEAAVVFATRCGA CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHEEEEHHCCE ITCGQKGAFPSLPTLAQVS EECCCCCCCCCCCCCCCCC >Mature Secondary Structure TVLLSFGEVLVDLLPTDATGKHHQPIAGGAPANVAVGYAKLGGKSYFAGGISADHYGVM EEEEEHHHHHHHHCCCCCCCCCCCCCCCCCCCHHEEEHHHHCCCEEEECCCCCCHHHHH LKQALADQGVATDYLAEVPGAATATVLVNLDEQGERTFEFNRNGTADMRYSNQHFDNIPW HHHHHHCCCCCHHHHHHCCCCCEEEEEEEECCCCCEEEEECCCCCCCEEECCCCCCCCCC QGIDIFHLCSNTFTETAIFNTSLYGARCANAFATLVSFDVNLRLSLWQDTSLLAERVEQC CCCHHHHHHCCCHHHHHEECCCCCHHHHHHHHHHHHHCCEEEEEEEECCHHHHHHHHHHH FRYTQVLKMSREEADYLALARDKSFEDYLQFCLAQGVEVILVTDGANPVQCITAQQRFSV HHHHHHHHHHHHHHHEEEEECCCCHHHHHHHHHHCCCEEEEEECCCCCEEEEECHHHCCC PVPKISAVDTTAAGDSFISGFLFALGLELEYDLGNLTLKQRLESKAHLEAAVVFATRCGA CCCCCCCCCCCCCCHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHHHEEEEHHCCE ITCGQKGAFPSLPTLAQVS EECCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 2174811 [H]