Definition | Shewanella baltica OS195 chromosome, complete genome. |
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Accession | NC_009997 |
Length | 5,347,283 |
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The map label for this gene is 160873188
Identifier: 160873188
GI number: 160873188
Start: 71974
End: 72711
Strand: Direct
Name: 160873188
Synonym: Sbal195_0062
Alternate gene names: NA
Gene position: 71974-72711 (Clockwise)
Preceding gene: 160873187
Following gene: 160873189
Centisome position: 1.35
GC content: 46.61
Gene sequence:
>738_bases ATGTTAACGGACCCTCTTTTTTGGTTGGTGGCGATACCCGCAGTGTTGATTACGGGGATTTCTAAATCCGGTTTTGCGGG TGGCGTGGGCGGCTTAACTGTCCCGCTATTGGCGCTGGCCATTAGTCCTACCACAGCGGCGGCGCTTATGTTACCGCTGC TGATTTATATGGATTTTTTAAGCGTACGTTCTTGGTGGGGGCAACATAATCCGCGTCATTTATGGATATTATTGCCCGCG GCAATAGTGGGTATTTTTATCGCTTATTTGTTGTTTGATAGGTTGAATGAAGAATATCTACGGGCGATTTTAGGTTGTGT GTCCCTTGGTTTTGGTTTGTATGGTTTGATTCTGGGGGATAAAACTCAAGCATCACCTTCACCTCTGGTTGGACGCTTGT GTGGCTTAACAGCAGGATTTACTAGCTTTGTTGCCCATGCGGGCGGGCCGCCACTCAATGCTTACTTGTTGCCGCTGCGT TTGGCTAAGGCGGAGTTTTTAGCCACGGCTGTGGTGTTTTTTGCTGTGGTAAATCTGGTCAAGCTTATCCCCTACAGTTT GCTTGGGCAGATTAACCAAGAGAATATTATCGTTTCTCTGCTACTGGTGCCGCTGGCATGGTTAGGGGTAAAGCTAGGTT TGTTTATTCAAGATAAAATTAACGACAGGTTATTTAAGCGCATCATATTGATTTTAATGGTGCTGGTGGGCGTGCGTTTA TTGTGGACCGCGTTATAG
Upstream 100 bases:
>100_bases AAGCAAAAATCCGCAGCTAAATGGCTGCGGATTTTTTACTTTTTTATCACCTCAACAACAGGTAACTTGATAGCCATAAA GCGTTATTCAGGATGTGTTG
Downstream 100 bases:
>100_bases TTTTAAGCTTTGGGTTACATTAGTCTGCTAGAGTGCGCGGGTGTTGGGGCATTTTGATCCCCAGCCGCCCTGAATTTACC TGATAAAAACTCAAAATTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 245; Mature: 245
Protein sequence:
>245_residues MLTDPLFWLVAIPAVLITGISKSGFAGGVGGLTVPLLALAISPTTAAALMLPLLIYMDFLSVRSWWGQHNPRHLWILLPA AIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYGLILGDKTQASPSPLVGRLCGLTAGFTSFVAHAGGPPLNAYLLPLR LAKAEFLATAVVFFAVVNLVKLIPYSLLGQINQENIIVSLLLVPLAWLGVKLGLFIQDKINDRLFKRIILILMVLVGVRL LWTAL
Sequences:
>Translated_245_residues MLTDPLFWLVAIPAVLITGISKSGFAGGVGGLTVPLLALAISPTTAAALMLPLLIYMDFLSVRSWWGQHNPRHLWILLPA AIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYGLILGDKTQASPSPLVGRLCGLTAGFTSFVAHAGGPPLNAYLLPLR LAKAEFLATAVVFFAVVNLVKLIPYSLLGQINQENIIVSLLLVPLAWLGVKLGLFIQDKINDRLFKRIILILMVLVGVRL LWTAL >Mature_245_residues MLTDPLFWLVAIPAVLITGISKSGFAGGVGGLTVPLLALAISPTTAAALMLPLLIYMDFLSVRSWWGQHNPRHLWILLPA AIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYGLILGDKTQASPSPLVGRLCGLTAGFTSFVAHAGGPPLNAYLLPLR LAKAEFLATAVVFFAVVNLVKLIPYSLLGQINQENIIVSLLLVPLAWLGVKLGLFIQDKINDRLFKRIILILMVLVGVRL LWTAL
Specific function: Unknown
COG id: COG0730
COG function: function code R; Predicted permeases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26540; Mature: 26540
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLTDPLFWLVAIPAVLITGISKSGFAGGVGGLTVPLLALAISPTTAAALMLPLLIYMDFL CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SVRSWWGQHNPRHLWILLPAAIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYGLILGD HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC KTQASPSPLVGRLCGLTAGFTSFVAHAGGPPLNAYLLPLRLAKAEFLATAVVFFAVVNLV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLIPYSLLGQINQENIIVSLLLVPLAWLGVKLGLFIQDKINDRLFKRIILILMVLVGVRL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTAL HHHCC >Mature Secondary Structure MLTDPLFWLVAIPAVLITGISKSGFAGGVGGLTVPLLALAISPTTAAALMLPLLIYMDFL CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SVRSWWGQHNPRHLWILLPAAIVGIFIAYLLFDRLNEEYLRAILGCVSLGFGLYGLILGD HHHHHHCCCCCCEEEEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCC KTQASPSPLVGRLCGLTAGFTSFVAHAGGPPLNAYLLPLRLAKAEFLATAVVFFAVVNLV CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH KLIPYSLLGQINQENIIVSLLLVPLAWLGVKLGLFIQDKINDRLFKRIILILMVLVGVRL HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LWTAL HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA