Definition Shewanella baltica OS195 chromosome, complete genome.
Accession NC_009997
Length 5,347,283

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The map label for this gene is yrdB [C]

Identifier: 160873166

GI number: 160873166

Start: 43337

End: 43612

Strand: Direct

Name: yrdB [C]

Synonym: Sbal195_0040

Alternate gene names: 160873166

Gene position: 43337-43612 (Clockwise)

Preceding gene: 160873165

Following gene: 160873168

Centisome position: 0.81

GC content: 46.74

Gene sequence:

>276_bases
ATGAATCAAAGTATTCTTTTCCCCGATCTGCAATATTGGGACGATGCCCAAGGGCAAATCTGTTTTATGGCGCAATCGCA
GGGGATGAACATCAAGTGCTATATCAGTGCCGCTAAATTACGTGAGCTGAATGATTTCTCTGAACAGCCGAGTACCGATG
AAGCGGCTGCTATGCTGGCATTATTTGATGCGGTGAGATTTGACGCCGAAGAAATGGCAGAAGACTTAATCGAAGCCGAA
GAGTTTGATGAGTTTGGCGCAGTACGCCTAGGCTAG

Upstream 100 bases:

>100_bases
CGGCTAAGAGTTTTACCCTATGGCGAGGTGTTGAGCCCGACACCCAAGTGGTGTTGACGCTTTTGCGGGACAAACTAATG
GCAGAGCCTAAGTAGGAAGC

Downstream 100 bases:

>100_bases
CTTCATCGCGAGTTTCAGTGGATAGATTTTGAATCAATAAATAGCAAAAGGCGACAGAGACTGAATGAGTCTCTGCCGCC
TTTCTTATATAGCGATACTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 91; Mature: 91

Protein sequence:

>91_residues
MNQSILFPDLQYWDDAQGQICFMAQSQGMNIKCYISAAKLRELNDFSEQPSTDEAAAMLALFDAVRFDAEEMAEDLIEAE
EFDEFGAVRLG

Sequences:

>Translated_91_residues
MNQSILFPDLQYWDDAQGQICFMAQSQGMNIKCYISAAKLRELNDFSEQPSTDEAAAMLALFDAVRFDAEEMAEDLIEAE
EFDEFGAVRLG
>Mature_91_residues
MNQSILFPDLQYWDDAQGQICFMAQSQGMNIKCYISAAKLRELNDFSEQPSTDEAAAMLALFDAVRFDAEEMAEDLIEAE
EFDEFGAVRLG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 10267; Mature: 10267

Theoretical pI: Translated: 3.61; Mature: 3.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.2 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
2.2 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNQSILFPDLQYWDDAQGQICFMAQSQGMNIKCYISAAKLRELNDFSEQPSTDEAAAMLA
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHH
LFDAVRFDAEEMAEDLIEAEEFDEFGAVRLG
HHHHHCCCHHHHHHHHHHHHHHHCCCCEECC
>Mature Secondary Structure
MNQSILFPDLQYWDDAQGQICFMAQSQGMNIKCYISAAKLRELNDFSEQPSTDEAAAMLA
CCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEEEEHHHHHHHHHCCCCCCCHHHHHHHH
LFDAVRFDAEEMAEDLIEAEEFDEFGAVRLG
HHHHHCCCHHHHHHHHHHHHHHHCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA