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The map label for this gene is yutI

Identifier: 16080275

GI number: 16080275

Start: 3310386

End: 3310721

Strand: Direct

Name: yutI

Synonym: BSU32220

Alternate gene names: 16080275

Gene position: 3310386-3310721 (Clockwise)

Preceding gene: 255767739

Following gene: 16080281

Centisome position: 78.53

GC content: 42.86

Gene sequence:

>336_bases
ATGTGCTATAATAGGGAAAGCAACTTTGCAAACCAAACAATAGATTTTTATTGTTACACTGAATATAATGGTTTTATGAC
GACGAAAGGAGCGAATGTCATGACTGAAGTTGAAATGAAAGAACAGGTGCAGGAAGTACTGGACAAACTTCGTCCGTTTT
TACTTCGTGACGGCGGTGACTGTGAGCTTGTAGACGTAGATGAAGGTATCGTTAAGCTTCGTCTTCTAGGCGCATGCGGC
AGCTGCCCAAGTTCAACAATTACGTTGAAAGCCGGAATTGAGCGCGCTCTTCTTGAAGAAGTGCCGGGTGTCGTTGAAGT
AGAACAAGTCTTTTAA

Upstream 100 bases:

>100_bases
CTTGTAGACGCCCCCTTCTCCTATGTAAGTCCTTTCTTTTAAGTATACAGAGCCTAAGGGCGTTTTTATAGAAAAAAACC
GTTTTTGTGTTGAAGTCTGA

Downstream 100 bases:

>100_bases
TAAAGCAGCCAGGCTGATATTTGATCAGCCTGGCTTTTTTATTAGAGATGTTGATCAAACCATGAGCTGATATAATTCAG
GCGCTTGATCCGCTGTCTTG

Product: iron-sulfur scaffold protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MCYNRESNFANQTIDFYCYTEYNGFMTTKGANVMTEVEMKEQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACG
SCPSSTITLKAGIERALLEEVPGVVEVEQVF

Sequences:

>Translated_111_residues
MCYNRESNFANQTIDFYCYTEYNGFMTTKGANVMTEVEMKEQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACG
SCPSSTITLKAGIERALLEEVPGVVEVEQVF
>Mature_111_residues
MCYNRESNFANQTIDFYCYTEYNGFMTTKGANVMTEVEMKEQVQEVLDKLRPFLLRDGGDCELVDVDEGIVKLRLLGACG
SCPSSTITLKAGIERALLEEVPGVVEVEQVF

Specific function: May be involved in the formation or repair of [Fe-S] clusters present in iron-sulfur proteins

COG id: COG0694

COG function: function code O; Thioredoxin-like proteins and domains

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the nifU family

Homologues:

Organism=Homo sapiens, GI50593021, Length=69, Percent_Identity=49.2753623188406, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI50593025, Length=69, Percent_Identity=49.2753623188406, Blast_Score=64, Evalue=3e-11,
Organism=Homo sapiens, GI50593023, Length=70, Percent_Identity=48.5714285714286, Blast_Score=62, Evalue=7e-11,
Organism=Homo sapiens, GI50593019, Length=70, Percent_Identity=48.5714285714286, Blast_Score=62, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17541876, Length=87, Percent_Identity=43.6781609195402, Blast_Score=66, Evalue=4e-12,
Organism=Saccharomyces cerevisiae, GI6322811, Length=77, Percent_Identity=46.7532467532467, Blast_Score=60, Evalue=8e-11,
Organism=Drosophila melanogaster, GI45551492, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI24643765, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=4e-12,
Organism=Drosophila melanogaster, GI45556188, Length=70, Percent_Identity=45.7142857142857, Blast_Score=66, Evalue=4e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUTI_BACSU (O32119)

Other databases:

- EMBL:   AL009126
- PIR:   C70024
- RefSeq:   NP_391102.1
- HSSP:   Q9QZ23
- ProteinModelPortal:   O32119
- SMR:   O32119
- EnsemblBacteria:   EBBACT00000002268
- GeneID:   936658
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32220
- NMPDR:   fig|224308.1.peg.3228
- GenoList:   BSU32220
- GeneTree:   EBGT00050000001795
- HOGENOM:   HBG727577
- OMA:   KLLGACG
- BioCyc:   BSUB:BSU32220-MONOMER
- InterPro:   IPR001075
- ProDom:   PD002830

Pfam domain/function: PF01106 NifU

EC number: NA

Molecular weight: Translated: 12424; Mature: 12424

Theoretical pI: Translated: 4.11; Mature: 4.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

4.5 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
8.1 %Cys+Met (Translated Protein)
4.5 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
8.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCYNRESNFANQTIDFYCYTEYNGFMTTKGANVMTEVEMKEQVQEVLDKLRPFLLRDGGD
CCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHEECCCCC
CELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQVF
EEEEECCCCEEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCEEEEECC
>Mature Secondary Structure
MCYNRESNFANQTIDFYCYTEYNGFMTTKGANVMTEVEMKEQVQEVLDKLRPFLLRDGGD
CCCCCCCCCCCCEEEEEEEECCCCEEEECCCCEEEHHHHHHHHHHHHHHHHHHEECCCCC
CELVDVDEGIVKLRLLGACGSCPSSTITLKAGIERALLEEVPGVVEVEQVF
EEEEECCCCEEEEEEEECCCCCCCCEEEEECCHHHHHHHHCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377