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The map label for this gene is bioYB

Identifier: 16080256

GI number: 16080256

Start: 3294270

End: 3294872

Strand: Direct

Name: bioYB

Synonym: BSU32030

Alternate gene names: 16080256

Gene position: 3294270-3294872 (Clockwise)

Preceding gene: 255767730

Following gene: 16080259

Centisome position: 78.14

GC content: 47.26

Gene sequence:

>603_bases
ATGAAACAACGTAAACTTCGTGCGGGAGATATGGCGCTGATTGGCATGTTCGCCGCACTTATGGCTGTCGGGGCCAACAT
TACATCAGTAGCACCCTTTTTACAAGTAGCCGGCATTCCGCTTTCGATGCAGCCGTTTTTCTGTCTCTTGGCAGCTTTGC
TTCTTGGCAGCAAACGGGCAGCGATTGCCATGATTGTATATGCACTTGTGGGATTGGCCGGAGCGCCTGTGTTTGCTCAA
TTTTCAGCAGGCTTCGCACCGTTTGCAGGGAAAAGCGGCGGGTTTATTATCTCATACATTCCGGCAGCATTTGCAGCGGG
ATGGTTTTTAGAACGAAACATTCAGCCAAGTAAAATTCGATTTCTCATTGCTTCACTTATCGGAACGGCGATCATGTATC
TCATCGGCACTACCTATATGTATCTTGCACTGAAGCTGTGGATTCATACGCCAGTGAGCTACGGCACGGCTTGGGGCTTT
ATGATTTGGTTTATGGTAAAAGATACAGCGCTGGCTGTGATACTGTCGTTTATCGCACCAGCAATCTACCGCTCTATTCA
TAAAGCAACCGGCTTTAACAGAAATCACATATCATCTACGTAA

Upstream 100 bases:

>100_bases
ATGGGCCTCCTTTTTGTTAACCTAATTTAAAATCATGTTGACAATCTTTTTGTTCTTTATTACTCTATGATTGTGTATGT
CAACCTAAGGGGGAACAACG

Downstream 100 bases:

>100_bases
AAACCGTTCTATTGGACGGTTTTTTTATCATAACGAGAAAAGGCTCCCCAGTAAAGGGGAGCCTTTTTCCTATAAAACAA
GCGCTGCAATCCAGCCAAAG

Product: biotin transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 200; Mature: 200

Protein sequence:

>200_residues
MKQRKLRAGDMALIGMFAALMAVGANITSVAPFLQVAGIPLSMQPFFCLLAALLLGSKRAAIAMIVYALVGLAGAPVFAQ
FSAGFAPFAGKSGGFIISYIPAAFAAGWFLERNIQPSKIRFLIASLIGTAIMYLIGTTYMYLALKLWIHTPVSYGTAWGF
MIWFMVKDTALAVILSFIAPAIYRSIHKATGFNRNHISST

Sequences:

>Translated_200_residues
MKQRKLRAGDMALIGMFAALMAVGANITSVAPFLQVAGIPLSMQPFFCLLAALLLGSKRAAIAMIVYALVGLAGAPVFAQ
FSAGFAPFAGKSGGFIISYIPAAFAAGWFLERNIQPSKIRFLIASLIGTAIMYLIGTTYMYLALKLWIHTPVSYGTAWGF
MIWFMVKDTALAVILSFIAPAIYRSIHKATGFNRNHISST
>Mature_200_residues
MKQRKLRAGDMALIGMFAALMAVGANITSVAPFLQVAGIPLSMQPFFCLLAALLLGSKRAAIAMIVYALVGLAGAPVFAQ
FSAGFAPFAGKSGGFIISYIPAAFAAGWFLERNIQPSKIRFLIASLIGTAIMYLIGTTYMYLALKLWIHTPVSYGTAWGF
MIWFMVKDTALAVILSFIAPAIYRSIHKATGFNRNHISST

Specific function: Putative biotin transporter

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): BIOYB_BACSU (O32104)

Other databases:

- EMBL:   AL009126
- PIR:   H70012
- RefSeq:   NP_391083.1
- ProteinModelPortal:   O32104
- EnsemblBacteria:   EBBACT00000001191
- GeneID:   936511
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU32030
- NMPDR:   fig|224308.1.peg.3209
- GenoList:   BSU32030
- GeneTree:   EBGT00050000001693
- HOGENOM:   HBG672824
- OMA:   GMFAALM
- ProtClustDB:   CLSK887821
- BioCyc:   BSUB:BSU32030-MONOMER
- GO:   GO:0006810
- InterPro:   IPR003784
- PIRSF:   PIRSF016661

Pfam domain/function: PF02632 BioY

EC number: NA

Molecular weight: Translated: 21538; Mature: 21538

Theoretical pI: Translated: 10.81; Mature: 10.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11a60a38)-; HASH(0x12468950)-; HASH(0x123efb10)-; HASH(0x123ec27c)-; HASH(0x1243afa8)-; HASH(0x11724df0)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKQRKLRAGDMALIGMFAALMAVGANITSVAPFLQVAGIPLSMQPFFCLLAALLLGSKRA
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH
AIAMIVYALVGLAGAPVFAQFSAGFAPFAGKSGGFIISYIPAAFAAGWFLERNIQPSKIR
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHH
FLIASLIGTAIMYLIGTTYMYLALKLWIHTPVSYGTAWGFMIWFMVKDTALAVILSFIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYRSIHKATGFNRNHISST
HHHHHHHHHCCCCCCCCCCH
>Mature Secondary Structure
MKQRKLRAGDMALIGMFAALMAVGANITSVAPFLQVAGIPLSMQPFFCLLAALLLGSKRA
CCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHCCCHH
AIAMIVYALVGLAGAPVFAQFSAGFAPFAGKSGGFIISYIPAAFAAGWFLERNIQPSKIR
HHHHHHHHHHHHCCCCHHHHHHCCCCCCCCCCCCEEEEHHHHHHHHHHHHHCCCCHHHHH
FLIASLIGTAIMYLIGTTYMYLALKLWIHTPVSYGTAWGFMIWFMVKDTALAVILSFIAP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIYRSIHKATGFNRNHISST
HHHHHHHHHCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377