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The map label for this gene is cdoA

Identifier: 16080166

GI number: 16080166

Start: 3193863

End: 3194348

Strand: Direct

Name: cdoA

Synonym: BSU31140

Alternate gene names: 16080166

Gene position: 3193863-3194348 (Clockwise)

Preceding gene: 16080162

Following gene: 16080169

Centisome position: 75.76

GC content: 39.71

Gene sequence:

>486_bases
ATGGAACTGTATGAGTGTATCCAAGACATTTTTGGCGGCTTGAAAAATCCATCGGTTAAAGATTTAGCAACGTCTTTAAA
ACAAATTCCAAACGCAGCAAAATTGAGTCAACCGTATATTAAGGAACCAGACCAGTACGCTTACGGCCGAAATGCCATCT
ATCGAAATAATGAATTGGAAATTATCGTGATTAACATTCCGCCAAACAAGGAGACAACAGTACACGATCATGGTCAATCC
ATTGGTTGTGCAATGGTGTTAGAAGGAAAGCTTCTTAATTCTATTTATCGTTCAACCGGCGAACACGCAGAACTCTCCAA
TTCATACTTTGTCCACGAAGGAGAATGCCTTATTTCAACCAAAGGTTTAATTCACAAAATGTCCAATCCAACATCTGAAC
GAATGGTGTCTCTTCATGTCTACTCCCCTCCTTTGGAAGACATGACGGTCTTTGAGGAACAAAAGGAGGTATTGGAAAAT
TCATGA

Upstream 100 bases:

>100_bases
ATTTTTTTGTGTTCACTGGGCGTTTGCCGCCTCTAAATTGTATATGGGTAAATACCATGAATTAACCTATGAAATACCAA
TGTAAGGGAGGCAAAAACGA

Downstream 100 bases:

>100_bases
TTGACAGATAAACTGCTCACTTTGACTTCACTCAACTGGAGGATTCAGAGAATGAAACCTTTTCCTCAAAACAAAAAAAC
CCTTATCGAATAAGGGTTTA

Product: cysteine dioxygenase

Products: NA

Alternate protein names: CDO

Number of amino acids: Translated: 161; Mature: 161

Protein sequence:

>161_residues
MELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYRNNELEIIVINIPPNKETTVHDHGQS
IGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPLEDMTVFEEQKEVLEN
S

Sequences:

>Translated_161_residues
MELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYRNNELEIIVINIPPNKETTVHDHGQS
IGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPLEDMTVFEEQKEVLEN
S
>Mature_161_residues
MELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYRNNELEIIVINIPPNKETTVHDHGQS
IGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLISTKGLIHKMSNPTSERMVSLHVYSPPLEDMTVFEEQKEVLEN
S

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cysteine dioxygenase family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): CDOA_BACSU (O32085)

Other databases:

- EMBL:   AL009126
- PIR:   F70006
- RefSeq:   NP_390992.1
- PDB:   3EQE
- PDBsum:   3EQE
- ProteinModelPortal:   O32085
- SMR:   O32085
- EnsemblBacteria:   EBBACT00000003406
- GeneID:   938837
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31140
- NMPDR:   fig|224308.1.peg.3117
- GenoList:   BSU31140
- GeneTree:   EBGT00050000005627
- OMA:   HVYSPPL
- ProtClustDB:   CLSK219258
- BioCyc:   BSUB:BSU31140-MONOMER
- BRENDA:   1.13.11.20
- InterPro:   IPR011051
- InterPro:   IPR010300
- InterPro:   IPR014710
- Gene3D:   G3DSA:2.60.120.10

Pfam domain/function: PF05995 CDO_I; SSF51182 RmlC_like_cupin

EC number: =1.13.11.20

Molecular weight: Translated: 18127; Mature: 18127

Theoretical pI: Translated: 5.02; Mature: 5.02

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYRNNELE
CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCEEECCCEE
IIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLIST
EEEEECCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEC
KGLIHKMSNPTSERMVSLHVYSPPLEDMTVFEEQKEVLENS
HHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MELYECIQDIFGGLKNPSVKDLATSLKQIPNAAKLSQPYIKEPDQYAYGRNAIYRNNELE
CCHHHHHHHHHCCCCCCCHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCCCCCEEECCCEE
IIVINIPPNKETTVHDHGQSIGCAMVLEGKLLNSIYRSTGEHAELSNSYFVHEGECLIST
EEEEECCCCCCCEECCCCCCCCEEEEEHHHHHHHHHHCCCCCCCCCCCEEEECCCEEEEC
KGLIHKMSNPTSERMVSLHVYSPPLEDMTVFEEQKEVLENS
HHHHHHHCCCCCHHEEEEEEECCCCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377