Click here to switch to the map view.

The map label for this gene is yuaB

Identifier: 16080160

GI number: 16080160

Start: 3187503

End: 3188048

Strand: Direct

Name: yuaB

Synonym: BSU31080

Alternate gene names: 16080160

Gene position: 3187503-3188048 (Clockwise)

Preceding gene: 16080159

Following gene: 16080161

Centisome position: 75.61

GC content: 43.22

Gene sequence:

>546_bases
ATGAAACGCAAATTATTATCTTCTTTGGCAATTAGTGCATTAAGTCTCGGGTTACTCGTTTCTGCACCTACAGCTTCTTT
CGCGGCTGAATCTACATCAACTAAAGCTCATACTGAATCCACTATGAGAACACAGTCTACAGCTTCATTGTTCGCAACAA
TCACTGGCGCCAGCAAAACGGAATGGTCTTTCTCAGATATCGAATTGACTTACCGTCCAAACACGCTTCTCAGCCTTGGC
GTTATGGAGTTTACATTGCCAAGCGGATTTACTGCAAACACGAAAGACACATTGAACGGAAATGCCTTGCGTACAACACA
GATCCTCAATAACGGGAAAACAGTAAGAGTTCCTTTGGCACTTGATTTGTTAGGAGCTGGCGAATTCAAATTAAAACTGA
ATAACAAAACACTTCCTGCCGCTGGTACATATACTTTCCGTGCGGAGAATAAATCATTAAGCATCGGAAATAAATTTTAC
GCAGAAGCCAGCATTGACGTGGCTAAGCGCAGCACTCCTCCGACTCAGCCTTGCGGTTGCAACTAA

Upstream 100 bases:

>100_bases
ATGGTAATTTTATGTAGGTAAAATTTGTATTTGGCCTTTCAGAGGAGGTGAAAAGCGGGCAGGCCTGTTTAATTTATCAT
TTTTTAGGGGGAATTTTGTT

Downstream 100 bases:

>100_bases
TGTAAAAGACCGGTTAACGCCGGTCTTTTTTGCGTTTTACCCTCCCCTTTTTCTCTAATCCCCGTTATCTTTTTTCTGGT
TTAAAATTTAAATTGACAAA

Product: hypothetical protein

Products: NA

Alternate protein names: ORF-1

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTMRTQSTASLFATITGASKTEWSFSDIELTYRPNTLLSLG
VMEFTLPSGFTANTKDTLNGNALRTTQILNNGKTVRVPLALDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFY
AEASIDVAKRSTPPTQPCGCN

Sequences:

>Translated_181_residues
MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTMRTQSTASLFATITGASKTEWSFSDIELTYRPNTLLSLG
VMEFTLPSGFTANTKDTLNGNALRTTQILNNGKTVRVPLALDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFY
AEASIDVAKRSTPPTQPCGCN
>Mature_181_residues
MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTMRTQSTASLFATITGASKTEWSFSDIELTYRPNTLLSLG
VMEFTLPSGFTANTKDTLNGNALRTTQILNNGKTVRVPLALDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFY
AEASIDVAKRSTPPTQPCGCN

Specific function: Required for complex colony architecture

COG id: NA

COG function: NA

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YUAB_BACSU (P71014)

Other databases:

- EMBL:   AL009126
- EMBL:   U47861
- PIR:   D70005
- RefSeq:   NP_390986.1
- EnsemblBacteria:   EBBACT00000001713
- GeneID:   938831
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU31080
- NMPDR:   fig|224308.1.peg.3111
- GenoList:   BSU31080
- GeneTree:   EBGT00050000002938
- HOGENOM:   HBG344791
- OMA:   WSFSDIE
- ProtClustDB:   CLSK887779
- BioCyc:   BSUB:BSU31080-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19257; Mature: 19257

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x11b3aee8)-;

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTMRTQSTASLFATITGASKT
CCHHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCC
EWSFSDIELTYRPNTLLSLGVMEFTLPSGFTANTKDTLNGNALRTTQILNNGKTVRVPLA
CCCCCEEEEEECCCCEEEECEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
LDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFYAEASIDVAKRSTPPTQPCGC
EEEECCCEEEEEECCCCCCCCCEEEEEECCCEEECCCEEEEECEEEEEECCCCCCCCCCC
N
H
>Mature Secondary Structure
MKRKLLSSLAISALSLGLLVSAPTASFAAESTSTKAHTESTMRTQSTASLFATITGASKT
CCHHHHHHHHHHHHHHHEEEECCCCHHCCCCCCCCHHHHHHHHHHCCEEEEEEEECCCCC
EWSFSDIELTYRPNTLLSLGVMEFTLPSGFTANTKDTLNGNALRTTQILNNGKTVRVPLA
CCCCCEEEEEECCCCEEEECEEEEECCCCCCCCCCCCCCCCEEEEEEECCCCCEEEEEEE
LDLLGAGEFKLKLNNKTLPAAGTYTFRAENKSLSIGNKFYAEASIDVAKRSTPPTQPCGC
EEEECCCEEEEEECCCCCCCCCEEEEEECCCEEECCCEEEEECEEEEEECCCCCCCCCCC
N
H

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377; 8752328