Definition Bacillus subtilis subsp. subtilis str. 168 chromosome, complete genome.
Accession NC_000964
Length 4,215,606

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The map label for this gene is yppF

Identifier: 16079284

GI number: 16079284

Start: 2338582

End: 2338770

Strand: Direct

Name: yppF

Synonym: BSU22260

Alternate gene names: 16079284

Gene position: 2338582-2338770 (Clockwise)

Preceding gene: 16079282

Following gene: 50812256

Centisome position: 55.47

GC content: 37.04

Gene sequence:

>189_bases
ATGAACGTATCATACTTAAGCAAACGTTTTGCAGAAATGAAGAAATATGAAACAGACTGTATGAATAAACTGATGGACTT
TGCCAAGTTCCTCTATATTCAAGGACATCTCAGCATAACTGAGTTTCGTAACAGTATGAAGGTTCTCGAAGCAAATGGAG
CAGAAAGCCCGGCATATGAGATGAATTAA

Upstream 100 bases:

>100_bases
TTGTCAAATTGTGTCGAAAGTTTAAATTTTTTAAAAACAGAAAAAAGTCGAATCATTATGGTACCATATTTTCAATACAG
ATGAGAGGGGATGCACCATA

Downstream 100 bases:

>100_bases
CGTCCGGCCCCCTATAAAAACGAAAAGAAGACAGCCTTTTACCGGCTGTCTTCTCTTGCAATTTCATCCTTTACTGCGTG
CAATGTATAAAGGACTGACT

Product: site-specific integrase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 62; Mature: 62

Protein sequence:

>62_residues
MNVSYLSKRFAEMKKYETDCMNKLMDFAKFLYIQGHLSITEFRNSMKVLEANGAESPAYEMN

Sequences:

>Translated_62_residues
MNVSYLSKRFAEMKKYETDCMNKLMDFAKFLYIQGHLSITEFRNSMKVLEANGAESPAYEMN
>Mature_62_residues
MNVSYLSKRFAEMKKYETDCMNKLMDFAKFLYIQGHLSITEFRNSMKVLEANGAESPAYEMN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPPF_BACSU (P50834)

Other databases:

- EMBL:   L47838
- EMBL:   AL009126
- PIR:   C69940
- RefSeq:   NP_390108.1
- EnsemblBacteria:   EBBACT00000002069
- GeneID:   939045
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU22260
- NMPDR:   fig|224308.1.peg.2231
- GenoList:   BSU22260
- GeneTree:   EBGT00050000001360
- HOGENOM:   HBG338127
- OMA:   TEFRNSM
- ProtClustDB:   CLSK2518243
- BioCyc:   BSUB:BSU22260-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 7266; Mature: 7266

Theoretical pI: Translated: 7.34; Mature: 7.34

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
9.7 %Met     (Translated Protein)
11.3 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
9.7 %Met     (Mature Protein)
11.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVSYLSKRFAEMKKYETDCMNKLMDFAKFLYIQGHLSITEFRNSMKVLEANGAESPAYE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
MN
CC
>Mature Secondary Structure
MNVSYLSKRFAEMKKYETDCMNKLMDFAKFLYIQGHLSITEFRNSMKVLEANGAESPAYE
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCCCCCC
MN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8760912; 9384377