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The map label for this gene is ypmS

Identifier: 16079232

GI number: 16079232

Start: 2290285

End: 2290848

Strand: Reverse

Name: ypmS

Synonym: BSU21730

Alternate gene names: 16079232

Gene position: 2290848-2290285 (Counterclockwise)

Preceding gene: 16079233

Following gene: 16079231

Centisome position: 54.34

GC content: 38.12

Gene sequence:

>564_bases
ATGAATAAGTGGAAGCGACTGTTTTTTATATTGCTTGCAATCAATTTTATCCTCGCCGCCGGGTTTGTGGCACTTGTTTT
GCTTCCGGGGGAACAGGCTCAGGTGAAAGATGCATCTGAGAGCGAGTATGGATTTCAAGTGACAAGCACAAAAGAATCAT
TAGCTGCGTTTGTTAACTCATATTTAAACGACAAAGCATCAAACAAGCTTGATTATAAAGTAGAGATTGATGATGATGTT
CATGTCGCAGGGAAAATCAAGGCATTTTCCACGTCTATTGATGCGTTTATCGCTTTTGAGCCGACCGTGAAAAAAAACGG
TGATGTAGAGCTGAATGTCACGAAATTTTCGTTAGGGAAATTGAGTATACCAATTAGCTTTGTGTTAAATTATATGGACA
GCTTTTATGAATTGCCGTCATTTGTCCATGTTCACCCCGGAGATAAAAGCATTGAAGTGCGTTTGTCAGAAATGCCTTTA
ACGAATGGAATGTATGTCAAAGCGGATAAGATAAATTTAGAAAAAGATGAAATTGAGTTTTCCTATTACCATCCTAAACA
ATAG

Upstream 100 bases:

>100_bases
AGATGATTTTCATCCTAATGGTACGGGTTATTCTCTTATCGCAAAGCGCGTCTATCAAGCCATTAAAAAAGAAGGATTAC
CGAAAGAGTAGGGTGACAGC

Downstream 100 bases:

>100_bases
AGGTGACTGAAAATGAAACGGATTTACCAGTATTTCAGTTTATTATCCTTTACATTTTCCCTGTACTTCGGCTGGCTTGC
TTATCATCATCTGGCTGCTG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 187

Protein sequence:

>187_residues
MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDASESEYGFQVTSTKESLAAFVNSYLNDKASNKLDYKVEIDDDV
HVAGKIKAFSTSIDAFIAFEPTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGDKSIEVRLSEMPL
TNGMYVKADKINLEKDEIEFSYYHPKQ

Sequences:

>Translated_187_residues
MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDASESEYGFQVTSTKESLAAFVNSYLNDKASNKLDYKVEIDDDV
HVAGKIKAFSTSIDAFIAFEPTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGDKSIEVRLSEMPL
TNGMYVKADKINLEKDEIEFSYYHPKQ
>Mature_187_residues
MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDASESEYGFQVTSTKESLAAFVNSYLNDKASNKLDYKVEIDDDV
HVAGKIKAFSTSIDAFIAFEPTVKKNGDVELNVTKFSLGKLSIPISFVLNYMDSFYELPSFVHVHPGDKSIEVRLSEMPL
TNGMYVKADKINLEKDEIEFSYYHPKQ

Specific function: Unknown

COG id: COG4698

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YPMS_BACSU (P54179)

Other databases:

- EMBL:   L77246
- EMBL:   AL009126
- PIR:   B69939
- RefSeq:   NP_390056.1
- ProteinModelPortal:   P54179
- EnsemblBacteria:   EBBACT00000004070
- GeneID:   939100
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU21730
- NMPDR:   fig|224308.1.peg.2179
- GenoList:   BSU21730
- GeneTree:   EBGT00050000002807
- HOGENOM:   HBG313540
- OMA:   SSYKLPK
- ProtClustDB:   CLSK887463
- BioCyc:   BSUB:BSU21730-MONOMER
- InterPro:   IPR018672

Pfam domain/function: PF09911 DUF2140

EC number: NA

Molecular weight: Translated: 21088; Mature: 21088

Theoretical pI: Translated: 5.30; Mature: 5.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x101fb7e8)-;

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDASESEYGFQVTSTKESLAAFVNS
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
YLNDKASNKLDYKVEIDDDVHVAGKIKAFSTSIDAFIAFEPTVKKNGDVELNVTKFSLGK
HHCCCCCCCEEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEECCE
LSIPISFVLNYMDSFYELPSFVHVHPGDKSIEVRLSEMPLTNGMYVKADKINLEKDEIEF
ECCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHEEE
SYYHPKQ
EEECCCH
>Mature Secondary Structure
MNKWKRLFFILLAINFILAAGFVALVLLPGEQAQVKDASESEYGFQVTSTKESLAAFVNS
CCHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCCCCEEEECCHHHHHHHHHH
YLNDKASNKLDYKVEIDDDVHVAGKIKAFSTSIDAFIAFEPTVKKNGDVELNVTKFSLGK
HHCCCCCCCEEEEEEECCCEEEEEEEEEEECCCEEEEEECCCCCCCCCEEEEEEEEECCE
LSIPISFVLNYMDSFYELPSFVHVHPGDKSIEVRLSEMPLTNGMYVKADKINLEKDEIEF
ECCCHHHHHHHHHHHHCCCCEEEECCCCCEEEEEEECCCCCCCEEEEEECCCCCHHHEEE
SYYHPKQ
EEECCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377