Click here to switch to the map view.

The map label for this gene is ydjP

Identifier: 16077695

GI number: 16077695

Start: 681547

End: 682362

Strand: Reverse

Name: ydjP

Synonym: BSU06280

Alternate gene names: 16077695

Gene position: 682362-681547 (Counterclockwise)

Preceding gene: 16077696

Following gene: 16077694

Centisome position: 16.19

GC content: 46.57

Gene sequence:

>816_bases
ATGCCATACATCATATTAGAAGATCAGACACGCCTTTACTATGAAACACACGGGAGCGGGACGCCGATCCTGTTTATACA
TGGGGTGCTGATGAGCGGACAATTTTTCCACAAACAATTTTCGGTGCTTTCTGCCAATTATCAATGTATTCGTCTTGATC
TTAGAGGACACGGCGAATCTGACAAAGTGCTTCACGGCCACACCATTTCCCAATATGCCCGTGACATAAGGGAATTTCTA
AATGCAATGGAGCTTGATCATGTCGTTCTTGCCGGCTGGTCAATGGGTGCTTTTGTCGTATGGGATTATCTCAATCAGTT
TGGGAATGATAACATTCAAGCCGCTGTGATCATCGATCAATCCGCTTCGGACTATCAATGGGAGGGCTGGGAACATGGTC
CATTTGATTTTGACGGCTTAAAAACAGCGATGCACGCCATTCAAACTGACCCGCTGCCTTTCTACGAAAGCTTCATCCAG
AATATGTTCGCAGAACCGCCTGCCGAGACCGAAACAGAATGGATGCTGGCAGAAATCCTCAAACAGCCGGCTGCCATTTC
TAGCACGATTTTATTTAACCAAACGGCCGCTGATTACCGGGGCACCCTCCAAAACATCAATGTGCCGGCATTGCTGTGCT
TCGGGGAAGACAAGAAATTTTTCTCTACAGCAGCTGGGGAACACTTGCGCAGCAATATTCCAAACGCGACACTCGTTACC
TTTCCTAAAAGCAGCCATTGCCCGTTTTTAGAAGAGCCAGATGCTTTTAACAGCACACTCCTCTCCTTTTTAGATGGGGT
TATTGGAAAGTCATAA

Upstream 100 bases:

>100_bases
CGAAACAGTCATTCAAGCGCAGCAGGCAGCCGCGACAGCTGCCATCATCAGCTCAACAGCAGCCAGCCATACTCATGATG
GAAACTAAAGGAGGAGAAAC

Downstream 100 bases:

>100_bases
AGAAAAAGGAATTAGGAGATTAGGGAAAAGTATGAGACAATAGGAAATGTGCAGTAAAATACATGAGGGAAGAAGTGACT
TTATGTCTTACTATAACAAA

Product: peroxydase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 271; Mature: 270

Protein sequence:

>271_residues
MPYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSANYQCIRLDLRGHGESDKVLHGHTISQYARDIREFL
NAMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQSASDYQWEGWEHGPFDFDGLKTAMHAIQTDPLPFYESFIQ
NMFAEPPAETETEWMLAEILKQPAAISSTILFNQTAADYRGTLQNINVPALLCFGEDKKFFSTAAGEHLRSNIPNATLVT
FPKSSHCPFLEEPDAFNSTLLSFLDGVIGKS

Sequences:

>Translated_271_residues
MPYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSANYQCIRLDLRGHGESDKVLHGHTISQYARDIREFL
NAMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQSASDYQWEGWEHGPFDFDGLKTAMHAIQTDPLPFYESFIQ
NMFAEPPAETETEWMLAEILKQPAAISSTILFNQTAADYRGTLQNINVPALLCFGEDKKFFSTAAGEHLRSNIPNATLVT
FPKSSHCPFLEEPDAFNSTLLSFLDGVIGKS
>Mature_270_residues
PYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSANYQCIRLDLRGHGESDKVLHGHTISQYARDIREFLN
AMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQSASDYQWEGWEHGPFDFDGLKTAMHAIQTDPLPFYESFIQN
MFAEPPAETETEWMLAEILKQPAAISSTILFNQTAADYRGTLQNINVPALLCFGEDKKFFSTAAGEHLRSNIPNATLVTF
PKSSHCPFLEEPDAFNSTLLSFLDGVIGKS

Specific function: Unknown

COG id: COG0596

COG function: function code R; Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the AB hydrolase superfamily

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): YDJP_BACSU (O34592)

Other databases:

- EMBL:   AB007638
- EMBL:   AL009126
- PIR:   D69790
- RefSeq:   NP_388509.1
- ProteinModelPortal:   O34592
- SMR:   O34592
- EnsemblBacteria:   EBBACT00000000049
- GeneID:   936035
- GenomeReviews:   AL009126_GR
- KEGG:   bsu:BSU06280
- NMPDR:   fig|224308.1.peg.628
- GenoList:   BSU06280
- GeneTree:   EBGT00070000032009
- HOGENOM:   HBG137415
- OMA:   KSPFFNP
- ProtClustDB:   CLSK561029
- BioCyc:   BSUB:BSU06280-MONOMER
- InterPro:   IPR000073

Pfam domain/function: PF00561 Abhydrolase_1

EC number: NA

Molecular weight: Translated: 30510; Mature: 30378

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: ACT_SITE 94-94 ACT_SITE 217-217 ACT_SITE 246-246

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSANYQCIRLDLRGHGES
CCEEEEECCCEEEEEECCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCC
DKVLHGHTISQYARDIREFLNAMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQ
CCEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEC
SASDYQWEGWEHGPFDFDGLKTAMHAIQTDPLPFYESFIQNMFAEPPAETETEWMLAEIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KQPAAISSTILFNQTAADYRGTLQNINVPALLCFGEDKKFFSTAAGEHLRSNIPNATLVT
HCCHHHHHEEEECCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEE
FPKSSHCPFLEEPDAFNSTLLSFLDGVIGKS
ECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PYIILEDQTRLYYETHGSGTPILFIHGVLMSGQFFHKQFSVLSANYQCIRLDLRGHGES
CEEEEECCCEEEEEECCCCCCEEEEEHHHHCCHHHHHHHHHHHCCCEEEEEEECCCCCC
DKVLHGHTISQYARDIREFLNAMELDHVVLAGWSMGAFVVWDYLNQFGNDNIQAAVIIDQ
CCEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCHHHHHHHHHHHCCCCEEEEEEEEC
SASDYQWEGWEHGPFDFDGLKTAMHAIQTDPLPFYESFIQNMFAEPPAETETEWMLAEIL
CCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KQPAAISSTILFNQTAADYRGTLQNINVPALLCFGEDKKFFSTAAGEHLRSNIPNATLVT
HCCHHHHHEEEECCCHHHHHHHHHCCCCCEEEEECCCCHHHHHHHHHHHHHCCCCCEEEE
FPKSSHCPFLEEPDAFNSTLLSFLDGVIGKS
ECCCCCCCCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9455482; 9384377