Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159901102
Identifier: 159901102
GI number: 159901102
Start: 5871853
End: 5872860
Strand: Direct
Name: 159901102
Synonym: Haur_4590
Alternate gene names: NA
Gene position: 5871853-5872860 (Clockwise)
Preceding gene: 159901101
Following gene: 159901103
Centisome position: 92.52
GC content: 51.79
Gene sequence:
>1008_bases ATGTCAAAACGGACGATTAGCGCAATTTTAATTGCCCTTGCATTAAGTGCATGTGGTGGTAGTGCCGCTCCAACCGCGAC GACCGCTCCAACCGCGACGACCGCTCCAACTGAAGCACCAGCGCCAACCGCAACCGAAGAAGCGGCTGCGCCAACCGAGG AGCCATCAACTGATCCAAGCGGAGCTGCTGCTGAAATTCCAGCACCACCGCAAAGCGATCCCTACGTCAAGGGCGAAAAC GAAATCATTGATGCAGCAATTGGTGGCATGGAAGGTGAATTCGAAAACCAAGAACAACAAACTGGCTTGGATCTCGAACC ATTGACCTATTACTTGACCGAAGAAGACCCACAAACGATTGTGGACTTCTACGAAGGTGAAATGGCAACCTATGGCTGGG GCACAGGCCAAGTCGAAGATCAAACCTTCGGCAAAGTTTTGGTCTACCCAAGCGCTAGCGAATTGACCACCATCGCCATG ATCGGCGTGCTGGATCTTTCAACCGTTGATCCAAGCATGAAGCAATCGATCATCTTCACCACGGTTGGTCGCTTGGGTAG CGGTAGTATGCCTTCAACTGATCCAACTCCTGACACTGGCGGTAGCACCACCGACCCAATGCCTGCTGGTGATTTGAGCG ATATTCCAGCCCCACCAAGCAGCGAAGAATATCAATCAGGTGACGATGCCTTGACCGATACCTTCATGGATAGCTTTGAA AAAGGCTTTGCTGGTAGCGCTGGCAGCACGGCTGTCTTGGGCAAGCAAGCTTATATCTCAACTGCAACCCCAGAAGAAAT CAAAACCTTCTATGATGACGAATTGACTGCTGCTGGCTGGACTTCAATGCCAACTGGTGCTGATACCACTGGCGGCATGG CCGGTACGCAAACCCTGACTTATGCCAACATGAGCGCTGGCGAAGCCTTGGTCATTATGACTGTTGATCGCAGCAGCATG GGCATGGGCGATGGCATTTTGGTCATCATCATCAAAGCTGGCCAATAA
Upstream 100 bases:
>100_bases TTGAGAGTTAGGATGAATGGGTGGCGCGAACATTGCTGAGCGTAAAGCCCTTGGCAATGCGAATGCCGACAACAGATTTT ATTTAGGAGGAATGACCCTC
Downstream 100 bases:
>100_bases GCTTCAGGCTTAATTAACTATCGGTTCCCCCTGAGTTGCTGCGGCAATTCAGGGGGATGTTTTTTTGCAAAATGACTGTG GTATCATACACCCGCGATCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSKRTISAILIALALSACGGSAAPTATTAPTATTAPTEAPAPTATEEAAAPTEEPSTDPSGAAAEIPAPPQSDPYVKGEN EIIDAAIGGMEGEFENQEQQTGLDLEPLTYYLTEEDPQTIVDFYEGEMATYGWGTGQVEDQTFGKVLVYPSASELTTIAM IGVLDLSTVDPSMKQSIIFTTVGRLGSGSMPSTDPTPDTGGSTTDPMPAGDLSDIPAPPSSEEYQSGDDALTDTFMDSFE KGFAGSAGSTAVLGKQAYISTATPEEIKTFYDDELTAAGWTSMPTGADTTGGMAGTQTLTYANMSAGEALVIMTVDRSSM GMGDGILVIIIKAGQ
Sequences:
>Translated_335_residues MSKRTISAILIALALSACGGSAAPTATTAPTATTAPTEAPAPTATEEAAAPTEEPSTDPSGAAAEIPAPPQSDPYVKGEN EIIDAAIGGMEGEFENQEQQTGLDLEPLTYYLTEEDPQTIVDFYEGEMATYGWGTGQVEDQTFGKVLVYPSASELTTIAM IGVLDLSTVDPSMKQSIIFTTVGRLGSGSMPSTDPTPDTGGSTTDPMPAGDLSDIPAPPSSEEYQSGDDALTDTFMDSFE KGFAGSAGSTAVLGKQAYISTATPEEIKTFYDDELTAAGWTSMPTGADTTGGMAGTQTLTYANMSAGEALVIMTVDRSSM GMGDGILVIIIKAGQ >Mature_334_residues SKRTISAILIALALSACGGSAAPTATTAPTATTAPTEAPAPTATEEAAAPTEEPSTDPSGAAAEIPAPPQSDPYVKGENE IIDAAIGGMEGEFENQEQQTGLDLEPLTYYLTEEDPQTIVDFYEGEMATYGWGTGQVEDQTFGKVLVYPSASELTTIAMI GVLDLSTVDPSMKQSIIFTTVGRLGSGSMPSTDPTPDTGGSTTDPMPAGDLSDIPAPPSSEEYQSGDDALTDTFMDSFEK GFAGSAGSTAVLGKQAYISTATPEEIKTFYDDELTAAGWTSMPTGADTTGGMAGTQTLTYANMSAGEALVIMTVDRSSMG MGDGILVIIIKAGQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34443; Mature: 34312
Theoretical pI: Translated: 3.49; Mature: 3.49
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 4.2 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 4.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKRTISAILIALALSACGGSAAPTATTAPTATTAPTEAPAPTATEEAAAPTEEPSTDPS CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC GAAAEIPAPPQSDPYVKGENEIIDAAIGGMEGEFENQEQQTGLDLEPLTYYLTEEDPQTI CCEEECCCCCCCCCEECCCCCEEHHHHCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHH VDFYEGEMATYGWGTGQVEDQTFGKVLVYPSASELTTIAMIGVLDLSTVDPSMKQSIIFT HHHHCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHEEEHHHHHCCCCCCHHHHHEEEEE TVGRLGSGSMPSTDPTPDTGGSTTDPMPAGDLSDIPAPPSSEEYQSGDDALTDTFMDSFE ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH KGFAGSAGSTAVLGKQAYISTATPEEIKTFYDDELTAAGWTSMPTGADTTGGMAGTQTLT HCCCCCCCCEEEECCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE YANMSAGEALVIMTVDRSSMGMGDGILVIIIKAGQ EECCCCCCEEEEEEECCCCCCCCCCEEEEEEECCC >Mature Secondary Structure SKRTISAILIALALSACGGSAAPTATTAPTATTAPTEAPAPTATEEAAAPTEEPSTDPS CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCC GAAAEIPAPPQSDPYVKGENEIIDAAIGGMEGEFENQEQQTGLDLEPLTYYLTEEDPQTI CCEEECCCCCCCCCEECCCCCEEHHHHCCCCCCCCCHHHHCCCCCCCEEEEEECCCHHHH VDFYEGEMATYGWGTGQVEDQTFGKVLVYPSASELTTIAMIGVLDLSTVDPSMKQSIIFT HHHHCCCEEEECCCCCCCCCCCCCEEEEECCCHHHHEEEHHHHHCCCCCCHHHHHEEEEE TVGRLGSGSMPSTDPTPDTGGSTTDPMPAGDLSDIPAPPSSEEYQSGDDALTDTFMDSFE ECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH KGFAGSAGSTAVLGKQAYISTATPEEIKTFYDDELTAAGWTSMPTGADTTGGMAGTQTLT HCCCCCCCCEEEECCCEEEECCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEE YANMSAGEALVIMTVDRSSMGMGDGILVIIIKAGQ EECCCCCCEEEEEEECCCCCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA