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The map label for this gene is 159901072

Identifier: 159901072

GI number: 159901072

Start: 5836490

End: 5837368

Strand: Direct

Name: 159901072

Synonym: Haur_4560

Alternate gene names: NA

Gene position: 5836490-5837368 (Clockwise)

Preceding gene: 159901071

Following gene: 159901074

Centisome position: 91.96

GC content: 52.45

Gene sequence:

>879_bases
ATGGCAACAATCATGACGGCGCAACGGCAGGAACGACGACAGCTAACCACTGGAATACGGGTTGGTCGAGCGGTGATGCT
AATGCCAGAACTTGTGGTGTTTCCAGCGCTCTGTGGCTTGTACTTTTTAACCAATCAGGCAGTTGGCGTGGCTTTGCTCG
GCGAGTTGTTGATTGGCTTATTTGTTGCTCGGATTGCCTTGGTTTGGTATGCCGGACGTGCTTGGGCACGCGGTTCGTAT
GCCCAAGCTGAACGCCTCGTTTTATGGTCGTTACGCATTTACCCTGATTCAGCTGATGCTTGGTTGGCCATGGGTTCGAT
TCAATTGGCGCAAGGCGAAACCGAAGCCGCCATCAAAGCGATCGAACGCGCCGACCAACTGTATCCATTTCACGCCCCAA
TTTATTTAGAAATGAGCCGCGCTTTGGCTGCTCACGGCGACTGGAACGAAGCTCGCCATTATGCCAGCATGGCCTTGGTG
TTGGACGAGCAATTGGCCTTGAGCTATAGCCATAACGCGTTGTTGAGCTTGCATTTCGATGAAGCCAGCCAAACCACCAA
ACAATGGATCGAAGCAGGCTTGGCCTTAGCGCCGCATGTTGCCGCCAAAGCCAGCCTGTATGTCGCCCGCGCTGAATTGG
CTTTTTTGGCTAACGACGAACGTCAAGTCCAATTAGCCTTGGATCAAGCTGAACTTTTGTTGAATGGCTGCCCAATTCCG
CAACAAGCTGAATTGCTCTATCGAATTGGCCAATTGCAACGTAGCTTGGGTCAGGTTGATGCCGCCCGCTCAAGCTTTGA
ACGAATCGAATACTCCGACCGCGAAGGTGGCTATGTTCATGCGGCATGGCGAGCCAAAGTTGAAACCAGCGTCAGCTAA

Upstream 100 bases:

>100_bases
TTAGCAAAATAGCACAAATTTTCAAGGTTGTGACACTCGTTGTCACAACCTTGGGCGATACTTAACCCTGATACGAGTAT
ATATAACAAGGGGTTGAGCT

Downstream 100 bases:

>100_bases
GTTGGCGCTGCTGATCAAATCGGCGATAGGCCTCGGCTAAAAGCTCCACGGGATGACGGGTCGCCAAGCCCGTCCCGTGG
CTAATTTGCCAGCGACAAGT

Product: TPR repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 292; Mature: 291

Protein sequence:

>292_residues
MATIMTAQRQERRQLTTGIRVGRAVMLMPELVVFPALCGLYFLTNQAVGVALLGELLIGLFVARIALVWYAGRAWARGSY
AQAERLVLWSLRIYPDSADAWLAMGSIQLAQGETEAAIKAIERADQLYPFHAPIYLEMSRALAAHGDWNEARHYASMALV
LDEQLALSYSHNALLSLHFDEASQTTKQWIEAGLALAPHVAAKASLYVARAELAFLANDERQVQLALDQAELLLNGCPIP
QQAELLYRIGQLQRSLGQVDAARSSFERIEYSDREGGYVHAAWRAKVETSVS

Sequences:

>Translated_292_residues
MATIMTAQRQERRQLTTGIRVGRAVMLMPELVVFPALCGLYFLTNQAVGVALLGELLIGLFVARIALVWYAGRAWARGSY
AQAERLVLWSLRIYPDSADAWLAMGSIQLAQGETEAAIKAIERADQLYPFHAPIYLEMSRALAAHGDWNEARHYASMALV
LDEQLALSYSHNALLSLHFDEASQTTKQWIEAGLALAPHVAAKASLYVARAELAFLANDERQVQLALDQAELLLNGCPIP
QQAELLYRIGQLQRSLGQVDAARSSFERIEYSDREGGYVHAAWRAKVETSVS
>Mature_291_residues
ATIMTAQRQERRQLTTGIRVGRAVMLMPELVVFPALCGLYFLTNQAVGVALLGELLIGLFVARIALVWYAGRAWARGSYA
QAERLVLWSLRIYPDSADAWLAMGSIQLAQGETEAAIKAIERADQLYPFHAPIYLEMSRALAAHGDWNEARHYASMALVL
DEQLALSYSHNALLSLHFDEASQTTKQWIEAGLALAPHVAAKASLYVARAELAFLANDERQVQLALDQAELLLNGCPIPQ
QAELLYRIGQLQRSLGQVDAARSSFERIEYSDREGGYVHAAWRAKVETSVS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32341; Mature: 32210

Theoretical pI: Translated: 6.17; Mature: 6.17

Prosite motif: PS50005 TPR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATIMTAQRQERRQLTTGIRVGRAVMLMPELVVFPALCGLYFLTNQAVGVALLGELLIGL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FVARIALVWYAGRAWARGSYAQAERLVLWSLRIYPDSADAWLAMGSIQLAQGETEAAIKA
HHHHHHHHHHCCCHHCCCCHHHHHEEEEEEEEEECCCCCCEEEECCEEEECCCHHHHHHH
IERADQLYPFHAPIYLEMSRALAAHGDWNEARHYASMALVLDEQLALSYSHNALLSLHFD
HHHHHHCCCCCCCHHEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEC
EASQTTKQWIEAGLALAPHVAAKASLYVARAELAFLANDERQVQLALDQAELLLNGCPIP
HHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHCCCCCC
QQAELLYRIGQLQRSLGQVDAARSSFERIEYSDREGGYVHAAWRAKVETSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCC
>Mature Secondary Structure 
ATIMTAQRQERRQLTTGIRVGRAVMLMPELVVFPALCGLYFLTNQAVGVALLGELLIGL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH
FVARIALVWYAGRAWARGSYAQAERLVLWSLRIYPDSADAWLAMGSIQLAQGETEAAIKA
HHHHHHHHHHCCCHHCCCCHHHHHEEEEEEEEEECCCCCCEEEECCEEEECCCHHHHHHH
IERADQLYPFHAPIYLEMSRALAAHGDWNEARHYASMALVLDEQLALSYSHNALLSLHFD
HHHHHHCCCCCCCHHEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHEECCCEEEEEEEC
EASQTTKQWIEAGLALAPHVAAKASLYVARAELAFLANDERQVQLALDQAELLLNGCPIP
HHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHEEECCCCEEEEEHHHHHHHHCCCCCC
QQAELLYRIGQLQRSLGQVDAARSSFERIEYSDREGGYVHAAWRAKVETSVS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA