Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is blaI [H]
Identifier: 159901007
GI number: 159901007
Start: 5755399
End: 5755821
Strand: Direct
Name: blaI [H]
Synonym: Haur_4494
Alternate gene names: 159901007
Gene position: 5755399-5755821 (Clockwise)
Preceding gene: 159901004
Following gene: 159901009
Centisome position: 90.68
GC content: 45.86
Gene sequence:
>423_bases ATGAGTTTGAAAATGCGCTTTCGTTTCAGCCCAACCCAAGATGGTTTAGTAAAAGTCCTTGGCCCGTTGGAAACCGAAAT TATGGAATTGTTATGGAAAGAAAATCAAGGCACGGTTAAGCAAATTCATCGTTCGTTGCAACATCGCCGCGATATTGCCT ACACGACTGTGATGACCACAATGAGCCGTTTGGCTGAAAAAGGTATTTTGCACCGCACCCGCGATGGGTTGGCCTATGTT TATAGCCCTGAACTAAGCCAAGATGAATTTGTGCAAATGGTTGTGCAACAAGTGCTCGATGGCTTGCTCGATGATTATCC CGATTTGACTCTGAACTATGTGGTTGATTATTTGGCTCGTAACGATCCAACCCAACTCAAGCAACTCAGCCGCGATGCCC AAAATCGCTATGCCCGCGTCTAA
Upstream 100 bases:
>100_bases GTAATCTTCGGCTCTAGTACCATTTCTTGCAAGGGCGTACACTCAAGACAGCTAAGAACAACCCGTTGCACCAGATCTCA ATCAAAGTAAGGAGCCGATA
Downstream 100 bases:
>100_bases GTTCTCTCACCCCAACCCCTCTCCCACTGCGGCGAGGGGTTTTTGTTCCCTCACCCCAACCCCTCTCCCACTGCGGCGGG CGAGGGGCTTTTGCGCAGTT
Product: CopY family transcriptional regulator
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 140; Mature: 139
Protein sequence:
>140_residues MSLKMRFRFSPTQDGLVKVLGPLETEIMELLWKENQGTVKQIHRSLQHRRDIAYTTVMTTMSRLAEKGILHRTRDGLAYV YSPELSQDEFVQMVVQQVLDGLLDDYPDLTLNYVVDYLARNDPTQLKQLSRDAQNRYARV
Sequences:
>Translated_140_residues MSLKMRFRFSPTQDGLVKVLGPLETEIMELLWKENQGTVKQIHRSLQHRRDIAYTTVMTTMSRLAEKGILHRTRDGLAYV YSPELSQDEFVQMVVQQVLDGLLDDYPDLTLNYVVDYLARNDPTQLKQLSRDAQNRYARV >Mature_139_residues SLKMRFRFSPTQDGLVKVLGPLETEIMELLWKENQGTVKQIHRSLQHRRDIAYTTVMTTMSRLAEKGILHRTRDGLAYVY SPELSQDEFVQMVVQQVLDGLLDDYPDLTLNYVVDYLARNDPTQLKQLSRDAQNRYARV
Specific function: Transcription regulator that binds to an inverted DNA repeat with the consensus sequence 5'-TAC[GT]AC-NNNNN-GT[AC]GTA-3' and regulates genes involved in antibiotic transport, detoxification and cell wall function. Also regulates its own transcription. Bin
COG id: COG3682
COG function: function code K; Predicted transcriptional regulator
Gene ontology:
Cell location: Cytoplasmic [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the BlaI transcriptional regulatory family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005650 - InterPro: IPR011991 [H]
Pfam domain/function: PF03965 Pencillinase_R [H]
EC number: NA
Molecular weight: Translated: 16333; Mature: 16202
Theoretical pI: Translated: 7.76; Mature: 7.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.3 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSLKMRFRFSPTQDGLVKVLGPLETEIMELLWKENQGTVKQIHRSLQHRRDIAYTTVMTT CCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH MSRLAEKGILHRTRDGLAYVYSPELSQDEFVQMVVQQVLDGLLDDYPDLTLNYVVDYLAR HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC NDPTQLKQLSRDAQNRYARV CCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure SLKMRFRFSPTQDGLVKVLGPLETEIMELLWKENQGTVKQIHRSLQHRRDIAYTTVMTT CCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH MSRLAEKGILHRTRDGLAYVYSPELSQDEFVQMVVQQVLDGLLDDYPDLTLNYVVDYLAR HHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHC NDPTQLKQLSRDAQNRYARV CCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9634230; 12218036 [H]