Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159900939

Identifier: 159900939

GI number: 159900939

Start: 5665754

End: 5666326

Strand: Direct

Name: 159900939

Synonym: Haur_4426

Alternate gene names: NA

Gene position: 5665754-5666326 (Clockwise)

Preceding gene: 159900934

Following gene: 159900940

Centisome position: 89.27

GC content: 48.87

Gene sequence:

>573_bases
ATGGCCATCACAAGTCGCGATCTACGTTCAGCGGAGGTTGTGCGCCGCACGAGACCTACCACCGTGATTACCTTACCGCA
AACGCGGCAGCGGTATAGCAGTCGCTCAGTGGGCTTTGGTGTGCATAACAAATTTGCTTATGCCATCTGTATTATTTTGG
CGTTGTTCTTAGCTAATGCCATGTTCAGCCCAATTGTTTCGTGGTTCAAGGTTAAATACGATGATGTGAAATATGGCCGC
CCACGCACGATGCAAACCACCGCCTTTGTCGGCCACGATGAAACCAATGGCTTGCCTTCACACTTTGTCGCAATGAATAT
GGAACGCCGAATTGTGATTGTTGAAATGCCTGGTGGTGATCCAGCTAAAGCCCGAACGATTGTTGGCCCATATCTCTTTG
GGGCCGGCGAAGATTTGACCCCTGTTAGCTTGCGCTTTGCCGATGTCAATGCTGACCAACGTTTGGATATGTTGGTGAGC
GTCAAACAAGAAGAGATGGTCTATATCAATGATGCGAGCAGCAATCAATTTCGCATGATCACCAGCGAAGAGCTAGCCAA
ACTGCAACAATAG

Upstream 100 bases:

>100_bases
GAGTAAAAAGGCTACTTTTTACTTGACACAGAACGCATGTTCTACTATACTCACAGCCAGCATATTTGTTCTCAAATGGT
TGACTCACAGGAGGTTCGCT

Downstream 100 bases:

>100_bases
GTATCAACGATTTCAGGGTAACCGAGAGTCAACAGCAAATATGTGAGTATCTACACCAATTCAGAGTCGCAACTGCGGCT
CTGAATTTTTTATAGTTTGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 190; Mature: 189

Protein sequence:

>190_residues
MAITSRDLRSAEVVRRTRPTTVITLPQTRQRYSSRSVGFGVHNKFAYAICIILALFLANAMFSPIVSWFKVKYDDVKYGR
PRTMQTTAFVGHDETNGLPSHFVAMNMERRIVIVEMPGGDPAKARTIVGPYLFGAGEDLTPVSLRFADVNADQRLDMLVS
VKQEEMVYINDASSNQFRMITSEELAKLQQ

Sequences:

>Translated_190_residues
MAITSRDLRSAEVVRRTRPTTVITLPQTRQRYSSRSVGFGVHNKFAYAICIILALFLANAMFSPIVSWFKVKYDDVKYGR
PRTMQTTAFVGHDETNGLPSHFVAMNMERRIVIVEMPGGDPAKARTIVGPYLFGAGEDLTPVSLRFADVNADQRLDMLVS
VKQEEMVYINDASSNQFRMITSEELAKLQQ
>Mature_189_residues
AITSRDLRSAEVVRRTRPTTVITLPQTRQRYSSRSVGFGVHNKFAYAICIILALFLANAMFSPIVSWFKVKYDDVKYGRP
RTMQTTAFVGHDETNGLPSHFVAMNMERRIVIVEMPGGDPAKARTIVGPYLFGAGEDLTPVSLRFADVNADQRLDMLVSV
KQEEMVYINDASSNQFRMITSEELAKLQQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21412; Mature: 21281

Theoretical pI: Translated: 9.67; Mature: 9.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
4.2 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAITSRDLRSAEVVRRTRPTTVITLPQTRQRYSSRSVGFGVHNKFAYAICIILALFLANA
CCCCCCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MFSPIVSWFKVKYDDVKYGRPRTMQTTAFVGHDETNGLPSHFVAMNMERRIVIVEMPGGD
HHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHEEECCCCEEEEEECCCCC
PAKARTIVGPYLFGAGEDLTPVSLRFADVNADQRLDMLVSVKQEEMVYINDASSNQFRMI
CCCCEEEECCEEECCCCCCCEEEEEEEECCCCHHHHHHEEECCCCEEEEECCCCCEEEEE
TSEELAKLQQ
CHHHHHHHCC
>Mature Secondary Structure 
AITSRDLRSAEVVRRTRPTTVITLPQTRQRYSSRSVGFGVHNKFAYAICIILALFLANA
CCCCCCHHHHHHHHHCCCCEEEECCHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHH
MFSPIVSWFKVKYDDVKYGRPRTMQTTAFVGHDETNGLPSHFVAMNMERRIVIVEMPGGD
HHHHHHHHHHEEECCCCCCCCCCEEEEEEECCCCCCCCCCHHEEECCCCEEEEEECCCCC
PAKARTIVGPYLFGAGEDLTPVSLRFADVNADQRLDMLVSVKQEEMVYINDASSNQFRMI
CCCCEEEECCEEECCCCCCCEEEEEEEECCCCHHHHHHEEECCCCEEEEECCCCCEEEEE
TSEELAKLQQ
CHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA