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The map label for this gene is yycG [H]

Identifier: 159900452

GI number: 159900452

Start: 4931349

End: 4933454

Strand: Reverse

Name: yycG [H]

Synonym: Haur_3937

Alternate gene names: 159900452

Gene position: 4933454-4931349 (Counterclockwise)

Preceding gene: 159900453

Following gene: 159900450

Centisome position: 77.73

GC content: 52.42

Gene sequence:

>2106_bases
ATGTCAACGCTTGCTTTATTTAGTAGCCTAGCCCAAACCTTGCTTGCAACCACACCTTTTGAGCAGCGCATGCAGCATTG
TTTTGGGCTGTTGGCGGATAGCTATCCTCAGCTTGATTTACGCTTAACCTTATTAAACGAGCCTGATGCTCGTCCGCAAG
TGGTTTTGCCGTTGCATCGTACCAGCGCCGTTTGGGATAACACTCGCATGATGCAGGTGGTGCGGCGGCGACAACCAGTC
GTGATCGATCAACACACAGCTCCAGCCTTGCCACCCAGCCCGTTTACCACCAGCGCAATTGTTGCTAGCGAATGGCAAGC
CGATATGCAATGTTATTTGGGGCTGCCGATTCAGTGGGAAGGCCGCTTGTGGGGCGTGTTGGAAGCCCGCCGTAATGGTA
CATTTAGCGCCAGCGAACGCACCTTATTGAGCAATTTGCTGCCCTTACTGGCCACCGCGATCGGCGAAGCCCACTGGGGG
CGACCGATTCATCATACCAGCAGCGAACAGCAGCTTGATGTACGGGCATTAACCCACGATTTAGAAATTGCGCCTGATGT
GACAACGTTGTTGACAACGCTCTTGCAACGGGCCATCCACAGCGTCAAAGCCAGCGCTGGCGCGATTAACTTGGTTGATC
GTGAGCATGGCGAATATCGTTTGATTGCCTCGCAAGGCTACCCGCCAACCGCTGGAATTAGTGAGCGAACATCGTGGCCT
TGGAATGTTGGGGTGGTCGGGCGGGTGGCACGCACTGGCAAGGCCGCCTTGTTGACCGATATTGCCCACGATAGCGAATG
GCAACTTTCTACCCCCGATGTGCGAGCCGAAATCGTCGTGCCCGTGCGGGTCGAGGGCGAGGCATGGGCGGTGCTGGTGC
TTTCGACCAATCGTGAGCCAATCTTTACAACCCGCGATCTTTATTTTATTCAGGCTTTGGCTGATGTGGCGGCGCGGCCA
TTACAACGGGCAACCAGTTATAGCGAATTGCTCGAAGCCCGCATGCAATTGCAACAAACCTTGGCTAGTTTGCCGCTGGG
CTTGGCCTTGACTGATGGCGAAGGCCGAATTTTACGCACCAATCCCGCCTGGTATCAACTTTGGCAAATTGAGCAGCCCG
CCGATGAAACTGCGCTCTATTTGCCGTGGGATATTTTGCCCTTGCTGCTCAAACGGCTGTCGCATCCCTTGGAATTGACC
GATTTTTTTGCTGAATGCCAAGCTCAACCTGACGAAACCCTCGAATTAGCGCTGCGTTTGAGCGAACCACTTCAAGATTT
AAAATTGCGTTCAACCCCAGTTAAAGATGCTCAGCACCAAATTACTGGGCGCTTGGTGGTGATTGAAGATGTGACCCGCG
AGCGTGAAATCGACAAGATGAAAAACGAGTTTGTGTCGGTGGTATCGCATGAATTGCGTACCCCGCTAACCTCGATTTTG
GGCTATACCGAGTTGCTGTTAGCGCGTGAATTCAAGCCAGTTGAACGTCAAGAGTTCGTCCAAACCGTCTATGATCAGGC
CAACCAACTCTCGAAGATGGTCGATGATCTGCTGAATCTTTCGCGTTTGGATGCAGGCCAGATCAAGCTGAATCGTTGGG
TGGTGTCGCTGCACCAAATTATTCGTGAAATTACCAAGCAACTTAACGAAACATTGTCTGAAAAGCATCGTTTGTTAATT
GATATTCCCGAAGGCATTCCGCCAATCTTTGCCGATAAAGATAAAGTGCGTCAGATTTTGACCAACCTGCTCTCGAATGC
GATCAAATATTCGCCCAATGGCGGCCAAGTAGCCTTGATTGTACGTGAATTGCGTAAAGTTCCGCCTGGTGCGCCGCCCT
TGCCCAACGAGCGCTCGGTGATTATTGCGGTGCGCGACCAAGGTATGGGTATTTCCGAAGAAGATTTGCCCAAGCTGTTT
ACGCGTTTTTTCCGCGTCGATAACTCGACGACTCGCAAAATTGGCGGCACAGGCTTAGGCTTATCAATCACCAAGGCCTT
GATCGAGTTGCATGGCGGGCGAATTTGGGCCACCAGCACGCTTGGCCGTGGCACAACCTTCTGGGTAACCTTGCCAATTG
CCACTGAGTTAGCCCGCCGAGGATGA

Upstream 100 bases:

>100_bases
TTATCGGCGCGGCCTTGGCGGCTAGCGAATTGTTCGAGCAGGGTCACCAAATTCCGAATGCCCACTAAAATGTGAGTCAA
CTTACAGCCTTGAGGATTCT

Downstream 100 bases:

>100_bases
GTTGATCCACGAAGGACACGAAGAACCACGAAACCAAACTTCGTGCGCTTCGTGTCCTTCGTGGATAAAAAATAATTCCT
TACGAAACCACAACTACTTG

Product: GAF sensor signal transduction histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 701; Mature: 700

Protein sequence:

>701_residues
MSTLALFSSLAQTLLATTPFEQRMQHCFGLLADSYPQLDLRLTLLNEPDARPQVVLPLHRTSAVWDNTRMMQVVRRRQPV
VIDQHTAPALPPSPFTTSAIVASEWQADMQCYLGLPIQWEGRLWGVLEARRNGTFSASERTLLSNLLPLLATAIGEAHWG
RPIHHTSSEQQLDVRALTHDLEIAPDVTTLLTTLLQRAIHSVKASAGAINLVDREHGEYRLIASQGYPPTAGISERTSWP
WNVGVVGRVARTGKAALLTDIAHDSEWQLSTPDVRAEIVVPVRVEGEAWAVLVLSTNREPIFTTRDLYFIQALADVAARP
LQRATSYSELLEARMQLQQTLASLPLGLALTDGEGRILRTNPAWYQLWQIEQPADETALYLPWDILPLLLKRLSHPLELT
DFFAECQAQPDETLELALRLSEPLQDLKLRSTPVKDAQHQITGRLVVIEDVTREREIDKMKNEFVSVVSHELRTPLTSIL
GYTELLLAREFKPVERQEFVQTVYDQANQLSKMVDDLLNLSRLDAGQIKLNRWVVSLHQIIREITKQLNETLSEKHRLLI
DIPEGIPPIFADKDKVRQILTNLLSNAIKYSPNGGQVALIVRELRKVPPGAPPLPNERSVIIAVRDQGMGISEEDLPKLF
TRFFRVDNSTTRKIGGTGLGLSITKALIELHGGRIWATSTLGRGTTFWVTLPIATELARRG

Sequences:

>Translated_701_residues
MSTLALFSSLAQTLLATTPFEQRMQHCFGLLADSYPQLDLRLTLLNEPDARPQVVLPLHRTSAVWDNTRMMQVVRRRQPV
VIDQHTAPALPPSPFTTSAIVASEWQADMQCYLGLPIQWEGRLWGVLEARRNGTFSASERTLLSNLLPLLATAIGEAHWG
RPIHHTSSEQQLDVRALTHDLEIAPDVTTLLTTLLQRAIHSVKASAGAINLVDREHGEYRLIASQGYPPTAGISERTSWP
WNVGVVGRVARTGKAALLTDIAHDSEWQLSTPDVRAEIVVPVRVEGEAWAVLVLSTNREPIFTTRDLYFIQALADVAARP
LQRATSYSELLEARMQLQQTLASLPLGLALTDGEGRILRTNPAWYQLWQIEQPADETALYLPWDILPLLLKRLSHPLELT
DFFAECQAQPDETLELALRLSEPLQDLKLRSTPVKDAQHQITGRLVVIEDVTREREIDKMKNEFVSVVSHELRTPLTSIL
GYTELLLAREFKPVERQEFVQTVYDQANQLSKMVDDLLNLSRLDAGQIKLNRWVVSLHQIIREITKQLNETLSEKHRLLI
DIPEGIPPIFADKDKVRQILTNLLSNAIKYSPNGGQVALIVRELRKVPPGAPPLPNERSVIIAVRDQGMGISEEDLPKLF
TRFFRVDNSTTRKIGGTGLGLSITKALIELHGGRIWATSTLGRGTTFWVTLPIATELARRG
>Mature_700_residues
STLALFSSLAQTLLATTPFEQRMQHCFGLLADSYPQLDLRLTLLNEPDARPQVVLPLHRTSAVWDNTRMMQVVRRRQPVV
IDQHTAPALPPSPFTTSAIVASEWQADMQCYLGLPIQWEGRLWGVLEARRNGTFSASERTLLSNLLPLLATAIGEAHWGR
PIHHTSSEQQLDVRALTHDLEIAPDVTTLLTTLLQRAIHSVKASAGAINLVDREHGEYRLIASQGYPPTAGISERTSWPW
NVGVVGRVARTGKAALLTDIAHDSEWQLSTPDVRAEIVVPVRVEGEAWAVLVLSTNREPIFTTRDLYFIQALADVAARPL
QRATSYSELLEARMQLQQTLASLPLGLALTDGEGRILRTNPAWYQLWQIEQPADETALYLPWDILPLLLKRLSHPLELTD
FFAECQAQPDETLELALRLSEPLQDLKLRSTPVKDAQHQITGRLVVIEDVTREREIDKMKNEFVSVVSHELRTPLTSILG
YTELLLAREFKPVERQEFVQTVYDQANQLSKMVDDLLNLSRLDAGQIKLNRWVVSLHQIIREITKQLNETLSEKHRLLID
IPEGIPPIFADKDKVRQILTNLLSNAIKYSPNGGQVALIVRELRKVPPGAPPLPNERSVIIAVRDQGMGISEEDLPKLFT
RFFRVDNSTTRKIGGTGLGLSITKALIELHGGRIWATSTLGRGTTFWVTLPIATELARRG

Specific function: Member of the two-component regulatory system YycG/YycF involved in the regulation of the ftsAZ operon, the yocH and ykvT, cwlO, lytE, ydjM, yjeA, yoeB genes and the tagAB and tagDEF operons. Probably phosphorylates YycF [H]

COG id: COG5002

COG function: function code T; Signal transduction histidine kinase

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PAS (PER-ARNT-SIM) domain [H]

Homologues:

Organism=Escherichia coli, GI1789149, Length=239, Percent_Identity=35.9832635983264, Blast_Score=144, Evalue=1e-35,
Organism=Escherichia coli, GI1786600, Length=351, Percent_Identity=29.6296296296296, Blast_Score=144, Evalue=2e-35,
Organism=Escherichia coli, GI1788393, Length=244, Percent_Identity=31.1475409836066, Blast_Score=123, Evalue=4e-29,
Organism=Escherichia coli, GI145693157, Length=236, Percent_Identity=33.4745762711864, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI48994928, Length=277, Percent_Identity=28.5198555956679, Blast_Score=114, Evalue=2e-26,
Organism=Escherichia coli, GI1786783, Length=244, Percent_Identity=29.5081967213115, Blast_Score=112, Evalue=7e-26,
Organism=Escherichia coli, GI1788713, Length=390, Percent_Identity=24.8717948717949, Blast_Score=106, Evalue=6e-24,
Organism=Escherichia coli, GI1788549, Length=373, Percent_Identity=27.0777479892761, Blast_Score=104, Evalue=2e-23,
Organism=Escherichia coli, GI1788279, Length=230, Percent_Identity=30.8695652173913, Blast_Score=99, Evalue=7e-22,
Organism=Escherichia coli, GI1790436, Length=250, Percent_Identity=29.2, Blast_Score=99, Evalue=9e-22,
Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=30.2040816326531, Blast_Score=99, Evalue=1e-21,
Organism=Escherichia coli, GI87081816, Length=258, Percent_Identity=31.3953488372093, Blast_Score=94, Evalue=2e-20,
Organism=Escherichia coli, GI1790346, Length=242, Percent_Identity=30.5785123966942, Blast_Score=93, Evalue=5e-20,
Organism=Escherichia coli, GI1790300, Length=235, Percent_Identity=30.6382978723404, Blast_Score=87, Evalue=3e-18,
Organism=Escherichia coli, GI1790551, Length=240, Percent_Identity=30, Blast_Score=77, Evalue=3e-15,
Organism=Escherichia coli, GI87082128, Length=240, Percent_Identity=26.25, Blast_Score=76, Evalue=6e-15,
Organism=Escherichia coli, GI1790861, Length=214, Percent_Identity=27.1028037383178, Blast_Score=71, Evalue=2e-13,
Organism=Escherichia coli, GI1789403, Length=272, Percent_Identity=26.8382352941176, Blast_Score=69, Evalue=9e-13,
Organism=Escherichia coli, GI1787894, Length=244, Percent_Identity=27.0491803278689, Blast_Score=69, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR001610
- InterPro:   IPR000014
- InterPro:   IPR000700
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 78565; Mature: 78434

Theoretical pI: Translated: 6.62; Mature: 6.62

Prosite motif: PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.7 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLALFSSLAQTLLATTPFEQRMQHCFGLLADSYPQLDLRLTLLNEPDARPQVVLPLHR
CCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECC
TSAVWDNTRMMQVVRRRQPVVIDQHTAPALPPSPFTTSAIVASEWQADMQCYLGLPIQWE
CHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCEEEC
GRLWGVLEARRNGTFSASERTLLSNLLPLLATAIGEAHWGRPIHHTSSEQQLDVRALTHD
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
LEIAPDVTTLLTTLLQRAIHSVKASAGAINLVDREHGEYRLIASQGYPPTAGISERTSWP
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCC
WNVGVVGRVARTGKAALLTDIAHDSEWQLSTPDVRAEIVVPVRVEGEAWAVLVLSTNREP
CCCCHHHHHHHCCCHHHHHHHCCCCCCEECCCCCCEEEEEEEEECCCEEEEEEEECCCCC
IFTTRDLYFIQALADVAARPLQRATSYSELLEARMQLQQTLASLPLGLALTDGEGRILRT
CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEC
NPAWYQLWQIEQPADETALYLPWDILPLLLKRLSHPLELTDFFAECQAQPDETLELALRL
CCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHH
SEPLQDLKLRSTPVKDAQHQITGRLVVIEDVTREREIDKMKNEFVSVVSHELRTPLTSIL
HHHHHHHHCCCCCCCHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYTELLLAREFKPVERQEFVQTVYDQANQLSKMVDDLLNLSRLDAGQIKLNRWVVSLHQI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IREITKQLNETLSEKHRLLIDIPEGIPPIFADKDKVRQILTNLLSNAIKYSPNGGQVALI
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEHH
VRELRKVPPGAPPLPNERSVIIAVRDQGMGISEEDLPKLFTRFFRVDNSTTRKIGGTGLG
HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCC
LSITKALIELHGGRIWATSTLGRGTTFWVTLPIATELARRG
HHHHHHHHHHCCCEEEEEECCCCCEEEEEEECHHHHHHHCC
>Mature Secondary Structure 
STLALFSSLAQTLLATTPFEQRMQHCFGLLADSYPQLDLRLTLLNEPDARPQVVLPLHR
CHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCCCCEEEEECC
TSAVWDNTRMMQVVRRRQPVVIDQHTAPALPPSPFTTSAIVASEWQADMQCYLGLPIQWE
CHHHHCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCHHHHHHHHHHCCHHHCCCCEEEC
GRLWGVLEARRNGTFSASERTLLSNLLPLLATAIGEAHWGRPIHHTSSEQQLDVRALTHD
CCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHC
LEIAPDVTTLLTTLLQRAIHSVKASAGAINLVDREHGEYRLIASQGYPPTAGISERTSWP
CCCCCCHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCEEEEEECCCCCCCCCCCCCCCC
WNVGVVGRVARTGKAALLTDIAHDSEWQLSTPDVRAEIVVPVRVEGEAWAVLVLSTNREP
CCCCHHHHHHHCCCHHHHHHHCCCCCCEECCCCCCEEEEEEEEECCCEEEEEEEECCCCC
IFTTRDLYFIQALADVAARPLQRATSYSELLEARMQLQQTLASLPLGLALTDGEGRILRT
CEEEHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEEC
NPAWYQLWQIEQPADETALYLPWDILPLLLKRLSHPLELTDFFAECQAQPDETLELALRL
CCCEEEEEECCCCCCCCEEECCHHHHHHHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHH
SEPLQDLKLRSTPVKDAQHQITGRLVVIEDVTREREIDKMKNEFVSVVSHELRTPLTSIL
HHHHHHHHCCCCCCCHHHHHHCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GYTELLLAREFKPVERQEFVQTVYDQANQLSKMVDDLLNLSRLDAGQIKLNRWVVSLHQI
HHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
IREITKQLNETLSEKHRLLIDIPEGIPPIFADKDKVRQILTNLLSNAIKYSPNGGQVALI
HHHHHHHHHHHHHHCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHEEECCCCCEEEHH
VRELRKVPPGAPPLPNERSVIIAVRDQGMGISEEDLPKLFTRFFRVDNSTTRKIGGTGLG
HHHHHHCCCCCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCHHCCCCCCCC
LSITKALIELHGGRIWATSTLGRGTTFWVTLPIATELARRG
HHHHHHHHHHCCCEEEEEECCCCCEEEEEEECHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377; 9829949; 10878122; 11758928 [H]