Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

Click here to switch to the map view.

The map label for this gene is 159900053

Identifier: 159900053

GI number: 159900053

Start: 4451048

End: 4451383

Strand: Direct

Name: 159900053

Synonym: Haur_3536

Alternate gene names: NA

Gene position: 4451048-4451383 (Clockwise)

Preceding gene: 159900050

Following gene: 159900054

Centisome position: 70.13

GC content: 43.15

Gene sequence:

>336_bases
GTGCGACTAAGCCTGTTTATCATTCTATTAGCAAGTTTGCTGATTGGGCCAGCATTATTGATGAAGTTTTACTATTTCGA
GCGCATTTGCCAAACGTATGCTCAAGCTCATAATTTTGAGAGCAGCCGTTACAGCCCAAGCAGCAAAAATAGCCCTGAGC
AATGTTTTTTTGAAGGACAACGCCCCGTACTGGTCAAGCAGATTGTTGGCTGGAAACATCGAATTATTTTAGTAGTATGG
CTCTTATATCAGCCATTCGGCGCATTTGGGCTAACCTTTGGGATCTTTTTAGCGCCATGGGAGAAACTGAAATGGTTCAA
AAACAGCCGTCCATGA

Upstream 100 bases:

>100_bases
AGTTTTAGCCCAAGTAAGCTCGCCGAACCATGCTCCGTCTGGTAGATTAACTATTATAAGGAAGCAAGTTATGCGATACC
CTCATCAACGAACATGTGTT

Downstream 100 bases:

>100_bases
CGCACTGCGTGCTATGCTATAATCCCAATACGGCTCAAAAATGACCGTGGAGGTTCCGATTTGAAAGATTTTTTTCGGCG
TGCGCCGTTACCCTTCACGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 111; Mature: 111

Protein sequence:

>111_residues
MRLSLFIILLASLLIGPALLMKFYYFERICQTYAQAHNFESSRYSPSSKNSPEQCFFEGQRPVLVKQIVGWKHRIILVVW
LLYQPFGAFGLTFGIFLAPWEKLKWFKNSRP

Sequences:

>Translated_111_residues
MRLSLFIILLASLLIGPALLMKFYYFERICQTYAQAHNFESSRYSPSSKNSPEQCFFEGQRPVLVKQIVGWKHRIILVVW
LLYQPFGAFGLTFGIFLAPWEKLKWFKNSRP
>Mature_111_residues
MRLSLFIILLASLLIGPALLMKFYYFERICQTYAQAHNFESSRYSPSSKNSPEQCFFEGQRPVLVKQIVGWKHRIILVVW
LLYQPFGAFGLTFGIFLAPWEKLKWFKNSRP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13065; Mature: 13065

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSLFIILLASLLIGPALLMKFYYFERICQTYAQAHNFESSRYSPSSKNSPEQCFFEGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
RPVLVKQIVGWKHRIILVVWLLYQPFGAFGLTFGIFLAPWEKLKWFKNSRP
CCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MRLSLFIILLASLLIGPALLMKFYYFERICQTYAQAHNFESSRYSPSSKNSPEQCFFEGQ
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHCCC
RPVLVKQIVGWKHRIILVVWLLYQPFGAFGLTFGIFLAPWEKLKWFKNSRP
CCHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA