Click here to switch to the map view.

The map label for this gene is bioC [C]

Identifier: 159899988

GI number: 159899988

Start: 4373542

End: 4374165

Strand: Direct

Name: bioC [C]

Synonym: Haur_3471

Alternate gene names: 159899988

Gene position: 4373542-4374165 (Clockwise)

Preceding gene: 159899987

Following gene: 159899989

Centisome position: 68.91

GC content: 46.96

Gene sequence:

>624_bases
ATGTCAATTCAACAGGCCTATAACCAATGGGCCAGCAGCTACGATAACGATCGCAACCGCACTCGCGACCTTGATCAACA
GGTGATGCAGCAGCTTTTGCAAGGCCACCACTATCAAGCAATTTTGGAATTGGGTTGTGGTACTGGCAAAAATACCCAGT
TTTTTAGCACGATTGGCACAGCAGTTGTGGCACTAGATTTTTCAAGCGGCATGTTGGAGCAAGCACGTAGCAAAATTAAT
GCTCAGCATGTGCAGTTTCAGCAAGCTGATTTAACCAAAGCATGGCCAGTTGCCAGGGCTTATTTCGATCTAGTCGTAAC
CAATTTGGTGCTTGAACATTTAGCTGATCTCGATCATTTTTTTGCCCAAGCCAACCAAGCGCTCATGCCCAATGGTCAAT
TATTGATCTCCGAACTGCATCCATTTCGCCAATATCAAGGCTCGCAGGCGCGTTTTCAAGGCCAACACGGTCAAATTGAA
GTTCCAGCATTTACCCATCATATCAGCGATTTTGGGCGAGCTGCCACGAAGCACGGCTTACAACTCAGCCAATTGCACGA
ATATTGGCATGCTGATGATGCCAATCAAGCGCCACGTTTGCTAACGCTGAGCTGGCACAAATAA

Upstream 100 bases:

>100_bases
CGCCTTGAGGCGGGACGGAAGGGTGGTGATCAACCAATTCTAAATTCTACCCTTGAAAGGATGAAACTAGGCACGAGGGC
ACTAAAACAGGAGCAAAGCA

Downstream 100 bases:

>100_bases
GCGAACGCTGGCAGAGATTGTGCTAGCAATCACCATTTAATTGCAGCGCTTGCAACGTCACTATGTACAATCACGTAGAA
GCGCCAACATACTCTCAGCA

Product: type 11 methyltransferase

Products: NA

Alternate protein names: Methyltransferase

Number of amino acids: Translated: 207; Mature: 206

Protein sequence:

>207_residues
MSIQQAYNQWASSYDNDRNRTRDLDQQVMQQLLQGHHYQAILELGCGTGKNTQFFSTIGTAVVALDFSSGMLEQARSKIN
AQHVQFQQADLTKAWPVARAYFDLVVTNLVLEHLADLDHFFAQANQALMPNGQLLISELHPFRQYQGSQARFQGQHGQIE
VPAFTHHISDFGRAATKHGLQLSQLHEYWHADDANQAPRLLTLSWHK

Sequences:

>Translated_207_residues
MSIQQAYNQWASSYDNDRNRTRDLDQQVMQQLLQGHHYQAILELGCGTGKNTQFFSTIGTAVVALDFSSGMLEQARSKIN
AQHVQFQQADLTKAWPVARAYFDLVVTNLVLEHLADLDHFFAQANQALMPNGQLLISELHPFRQYQGSQARFQGQHGQIE
VPAFTHHISDFGRAATKHGLQLSQLHEYWHADDANQAPRLLTLSWHK
>Mature_206_residues
SIQQAYNQWASSYDNDRNRTRDLDQQVMQQLLQGHHYQAILELGCGTGKNTQFFSTIGTAVVALDFSSGMLEQARSKINA
QHVQFQQADLTKAWPVARAYFDLVVTNLVLEHLADLDHFFAQANQALMPNGQLLISELHPFRQYQGSQARFQGQHGQIEV
PAFTHHISDFGRAATKHGLQLSQLHEYWHADDANQAPRLLTLSWHK

Specific function: Bioc Is Involved In An Early, But Chemically Unexplored, Step In The Conversion Of Pimelic Acid To Biotin. [C]

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23538; Mature: 23406

Theoretical pI: Translated: 6.85; Mature: 6.85

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIQQAYNQWASSYDNDRNRTRDLDQQVMQQLLQGHHYQAILELGCGTGKNTQFFSTIGT
CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHH
AVVALDFSSGMLEQARSKINAQHVQFQQADLTKAWPVARAYFDLVVTNLVLEHLADLDHF
HHHEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQANQALMPNGQLLISELHPFRQYQGSQARFQGQHGQIEVPAFTHHISDFGRAATKHGL
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCC
QLSQLHEYWHADDANQAPRLLTLSWHK
HHHHHHHHHCCCCCCCCCCEEEEECCC
>Mature Secondary Structure 
SIQQAYNQWASSYDNDRNRTRDLDQQVMQQLLQGHHYQAILELGCGTGKNTQFFSTIGT
CHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCHHHHHHHH
AVVALDFSSGMLEQARSKINAQHVQFQQADLTKAWPVARAYFDLVVTNLVLEHLADLDHF
HHHEEECCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAQANQALMPNGQLLISELHPFRQYQGSQARFQGQHGQIEVPAFTHHISDFGRAATKHGL
HHHCCCCCCCCCHHHHHHHHHHHHCCCCHHHCCCCCCEEECCHHHHHHHHHHHHHHHHCC
QLSQLHEYWHADDANQAPRLLTLSWHK
HHHHHHHHHCCCCCCCCCCEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA