Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is glmM [H]
Identifier: 159899937
GI number: 159899937
Start: 4309019
End: 4311526
Strand: Direct
Name: glmM [H]
Synonym: Haur_3420
Alternate gene names: 159899937
Gene position: 4309019-4311526 (Clockwise)
Preceding gene: 159899936
Following gene: 159899938
Centisome position: 67.9
GC content: 51.0
Gene sequence:
>2508_bases ATGAAAGCAGTTTTAATGGCTGGGGGTGAAGGCTCTCGGCTCCGACCACTCACCATCAGTCGGCCCAAACCAATGGTTCC GCTGGTCGATCGACCAGTCATGGGCCATATTATTGAACTTCTGAAACGCCACGGCATCACCGATATTATTATTACGGTGC AATATCTCGCCAATATTATTCAAGATTTTTATGGCGATGGCTCGGCGTTTGATGTCGATATTTCGTATTCGGTTGAGGAA GTGCCACTCGGCACGGCTGGTGCAGTTAAATATGCTTCACGCTTGATCGATGATGATAGCGAACCAATTCTGGTCATTTC AGGCGATGCGCTAACCGATTTTGATTTAACTGCCTTGATCGAAGCCCATAAACGCTCGAATGCCAAAGCCACGATTACCC TCACCCGTGTGCCCAACCCGCTGGAATATGGCGTGGTGATCACCGATGATACTGGCCGAATTCGTCAGTTCCTCGAAAAA CCTAGTTGGGGCGAGGTTTTTTCCGATACCGTCAATACTGGAATTTATGTGATCGACCCCTGTGTGCTTGATGATATTCC GCTGGGCGAGCCGTTTGATTTCTCCAAAGATTTGTTTCCTGCCTTGTTGCGGCGCGGCGAATTGCTTCATGGCTATATCG CCGAGGGCTATTGGACGGACGTTGGCAACATCGAAGCCTATATGCGAGCGTGCTCGGATTATTTGATGGGCATGGTCAAT TTGCCGCGCCTCGGCCATGATCGCGGCGATAATGTCTGGATCGAAGGTGAGGTTGAAATTGCCCCCGATGCCCAAATTCA TGGGCCAGTCTTTTTTGGCCATGGGGTCAAGATCAAAGGCGGGGCGATGGTATTCGGGCCATCGGTCATCCGCGATTATA CCATTATCGATTCACGTGCCACCATCGATCGTTCGATTATGTGGCGCAACTCGTATGTTGGCGAACGCGCCGAATTACGC GGGGCGATTGTTTGTAAGCAATGCAATATCAAAAGTCGCTCGTTGCTGTTCGAGGGCGTAGTGGTCGCCGATAGCACGAT CATCAACGCTGGGGCGGTGATTCAGCCCAACGTTAAAATTTGGCCCTCGAAAGAAGTTGAAGAAGGCGCGACCGTTAGTG CCTCGATTATTTGGGGTGCGCAAGGGCGGCGGGTGCTGTTTGGGCGCTACGGCATTACGGGCTTGGTCAATATCGATCTT ACGCCAGAATTTTGCGCCAAACTTGGGGCGGCCTATGGGGCAATTTTGCCCAAAAATACCACCGTCACCATGAATCGCGA TGCTCACTATACCCCACGAATGCTCAAACGTGGCTTGATTGCCGGCATTCCATCGGCGGGGATTAATGTTTTGGATTTGC ATTCGGTGCCAATTCCCACTGCCCGCTATTTGACCTATGCGCTGAATGCTGCGGGTGGTATGCATGTGCGGCTTTCGCCG TTCGATAATCGCGTGGTCGATATAAAATTCTTCGATCATCGCGGGCTTGATCTGGGCAGCGATATGGAGCGCAAGATCGA GAATACCTACTTCCGCGAAGATTATCGCCGCGTCTATCTCGATGAAATTGGCCGGATCACTGAAAACAGCGATTACAACT CGGTCTATATCGATAAATTCATGGAATCGCTTGACCCACATATTTTGCCCGAGCTAGAAGACCCGTGGAGTATCGTAATC GATTATGCTTCATCGAATGCTGCGCAAATTTTGGGTATCTTGCTACGGCGCTTGAATGTTGATTTAGTTGAACTCAATGC CCAAATCGATGAAGATCGTCTGTTCCAAACCGCCGATCAATTTAATGCTGGTATGCAACGACTGACTGCGATCGTGCCCG TGATGAATGCAGATATTGGAGTGCGGCTCGATTCGGGCGGCGAACGGATTTACGTTGTCGATGATACAGGCCATCGATTA ACTGACATTGAATTGTTGGCGGCGGTTACCGCTTTGACCATGGAAGCCAACAAAGGTGGTACGGTGGCCGTGCCAGTCAC CGCGCCGCGTTTATTCGATAAATTGGCCGAGCGCTATGGCGGGCGCATCCAGCGCACCAAAACCGCCTTGGGAGCGCTGA TGCAACAAGCTGCCAAATGCAACGATTTATGTGTCTTGGGCGATGCAGCAGGCAGCCTGATTTTCCCATCGTTCTTTCCA GTTGCTGATGGTCTGTTTGCAATTGTTAAATTGATGGAATTACTGGCCCGCGCCAAAATTCCCCTCTCGGAGATTCGTCG TTCCTTGCCACGCTCAGCCATGGCTAACCACAAAGTGCCATGTCGCTGGGAATCCAAGGGCAAAGTTATGCGGATTCTCA ACGAACAATATGCCGAGCGTGCTCAAGACAACATCGATGGGATCAAGATTGATCTTGGGCCGGAGTGGGTGTTGATTCTG CCCGACCCTGATGGCCCCTTCATTCATGTGATTGCCGAGGGAGTGAACGATGATCAAGCCCGCGTGCTAACCGAAAAATA TGCTGGTTTGGTGATGGGGCTTCAGTAG
Upstream 100 bases:
>100_bases CGGTATCTTCTGGTATACTGAACAACGGCGCGGCCCTCGAATGCCCGTGCTGGCCACCGCGCTGAGTGCTGCATTGTTGA CACTGCGAGGGTTGCAGACC
Downstream 100 bases:
>100_bases AACAAAGAACATAGAGCATAGAAAAAGAACCAGGCATATGACTTGTATCAAGGTATAGATAGGTTATAGCTACTATGCTC TGTGTTCTATGCTCTTATTT
Product: nucleotidyl transferase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 835; Mature: 835
Protein sequence:
>835_residues MKAVLMAGGEGSRLRPLTISRPKPMVPLVDRPVMGHIIELLKRHGITDIIITVQYLANIIQDFYGDGSAFDVDISYSVEE VPLGTAGAVKYASRLIDDDSEPILVISGDALTDFDLTALIEAHKRSNAKATITLTRVPNPLEYGVVITDDTGRIRQFLEK PSWGEVFSDTVNTGIYVIDPCVLDDIPLGEPFDFSKDLFPALLRRGELLHGYIAEGYWTDVGNIEAYMRACSDYLMGMVN LPRLGHDRGDNVWIEGEVEIAPDAQIHGPVFFGHGVKIKGGAMVFGPSVIRDYTIIDSRATIDRSIMWRNSYVGERAELR GAIVCKQCNIKSRSLLFEGVVVADSTIINAGAVIQPNVKIWPSKEVEEGATVSASIIWGAQGRRVLFGRYGITGLVNIDL TPEFCAKLGAAYGAILPKNTTVTMNRDAHYTPRMLKRGLIAGIPSAGINVLDLHSVPIPTARYLTYALNAAGGMHVRLSP FDNRVVDIKFFDHRGLDLGSDMERKIENTYFREDYRRVYLDEIGRITENSDYNSVYIDKFMESLDPHILPELEDPWSIVI DYASSNAAQILGILLRRLNVDLVELNAQIDEDRLFQTADQFNAGMQRLTAIVPVMNADIGVRLDSGGERIYVVDDTGHRL TDIELLAAVTALTMEANKGGTVAVPVTAPRLFDKLAERYGGRIQRTKTALGALMQQAAKCNDLCVLGDAAGSLIFPSFFP VADGLFAIVKLMELLARAKIPLSEIRRSLPRSAMANHKVPCRWESKGKVMRILNEQYAERAQDNIDGIKIDLGPEWVLIL PDPDGPFIHVIAEGVNDDQARVLTEKYAGLVMGLQ
Sequences:
>Translated_835_residues MKAVLMAGGEGSRLRPLTISRPKPMVPLVDRPVMGHIIELLKRHGITDIIITVQYLANIIQDFYGDGSAFDVDISYSVEE VPLGTAGAVKYASRLIDDDSEPILVISGDALTDFDLTALIEAHKRSNAKATITLTRVPNPLEYGVVITDDTGRIRQFLEK PSWGEVFSDTVNTGIYVIDPCVLDDIPLGEPFDFSKDLFPALLRRGELLHGYIAEGYWTDVGNIEAYMRACSDYLMGMVN LPRLGHDRGDNVWIEGEVEIAPDAQIHGPVFFGHGVKIKGGAMVFGPSVIRDYTIIDSRATIDRSIMWRNSYVGERAELR GAIVCKQCNIKSRSLLFEGVVVADSTIINAGAVIQPNVKIWPSKEVEEGATVSASIIWGAQGRRVLFGRYGITGLVNIDL TPEFCAKLGAAYGAILPKNTTVTMNRDAHYTPRMLKRGLIAGIPSAGINVLDLHSVPIPTARYLTYALNAAGGMHVRLSP FDNRVVDIKFFDHRGLDLGSDMERKIENTYFREDYRRVYLDEIGRITENSDYNSVYIDKFMESLDPHILPELEDPWSIVI DYASSNAAQILGILLRRLNVDLVELNAQIDEDRLFQTADQFNAGMQRLTAIVPVMNADIGVRLDSGGERIYVVDDTGHRL TDIELLAAVTALTMEANKGGTVAVPVTAPRLFDKLAERYGGRIQRTKTALGALMQQAAKCNDLCVLGDAAGSLIFPSFFP VADGLFAIVKLMELLARAKIPLSEIRRSLPRSAMANHKVPCRWESKGKVMRILNEQYAERAQDNIDGIKIDLGPEWVLIL PDPDGPFIHVIAEGVNDDQARVLTEKYAGLVMGLQ >Mature_835_residues MKAVLMAGGEGSRLRPLTISRPKPMVPLVDRPVMGHIIELLKRHGITDIIITVQYLANIIQDFYGDGSAFDVDISYSVEE VPLGTAGAVKYASRLIDDDSEPILVISGDALTDFDLTALIEAHKRSNAKATITLTRVPNPLEYGVVITDDTGRIRQFLEK PSWGEVFSDTVNTGIYVIDPCVLDDIPLGEPFDFSKDLFPALLRRGELLHGYIAEGYWTDVGNIEAYMRACSDYLMGMVN LPRLGHDRGDNVWIEGEVEIAPDAQIHGPVFFGHGVKIKGGAMVFGPSVIRDYTIIDSRATIDRSIMWRNSYVGERAELR GAIVCKQCNIKSRSLLFEGVVVADSTIINAGAVIQPNVKIWPSKEVEEGATVSASIIWGAQGRRVLFGRYGITGLVNIDL TPEFCAKLGAAYGAILPKNTTVTMNRDAHYTPRMLKRGLIAGIPSAGINVLDLHSVPIPTARYLTYALNAAGGMHVRLSP FDNRVVDIKFFDHRGLDLGSDMERKIENTYFREDYRRVYLDEIGRITENSDYNSVYIDKFMESLDPHILPELEDPWSIVI DYASSNAAQILGILLRRLNVDLVELNAQIDEDRLFQTADQFNAGMQRLTAIVPVMNADIGVRLDSGGERIYVVDDTGHRL TDIELLAAVTALTMEANKGGTVAVPVTAPRLFDKLAERYGGRIQRTKTALGALMQQAAKCNDLCVLGDAAGSLIFPSFFP VADGLFAIVKLMELLARAKIPLSEIRRSLPRSAMANHKVPCRWESKGKVMRILNEQYAERAQDNIDGIKIDLGPEWVLIL PDPDGPFIHVIAEGVNDDQARVLTEKYAGLVMGLQ
Specific function: Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate [H]
COG id: COG1208
COG function: function code MJ; Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphohexose mutase family [H]
Homologues:
Organism=Homo sapiens, GI11761619, Length=377, Percent_Identity=30.2387267904509, Blast_Score=185, Evalue=2e-46, Organism=Homo sapiens, GI11761621, Length=362, Percent_Identity=31.767955801105, Blast_Score=185, Evalue=2e-46, Organism=Homo sapiens, GI31881779, Length=417, Percent_Identity=24.9400479616307, Blast_Score=115, Evalue=2e-25, Organism=Homo sapiens, GI45447090, Length=417, Percent_Identity=24.9400479616307, Blast_Score=115, Evalue=2e-25, Organism=Escherichia coli, GI1789837, Length=396, Percent_Identity=26.5151515151515, Blast_Score=92, Evalue=1e-19, Organism=Escherichia coli, GI1788351, Length=237, Percent_Identity=29.957805907173, Blast_Score=89, Evalue=1e-18, Organism=Escherichia coli, GI1790224, Length=228, Percent_Identity=29.3859649122807, Blast_Score=77, Evalue=6e-15, Organism=Escherichia coli, GI1789566, Length=370, Percent_Identity=26.2162162162162, Blast_Score=67, Evalue=3e-12, Organism=Escherichia coli, GI1788361, Length=434, Percent_Identity=22.3502304147465, Blast_Score=64, Evalue=5e-11, Organism=Caenorhabditis elegans, GI133931050, Length=387, Percent_Identity=31.5245478036176, Blast_Score=182, Evalue=4e-46, Organism=Caenorhabditis elegans, GI17509979, Length=399, Percent_Identity=25.8145363408521, Blast_Score=110, Evalue=3e-24, Organism=Caenorhabditis elegans, GI17509981, Length=388, Percent_Identity=25, Blast_Score=101, Evalue=1e-21, Organism=Saccharomyces cerevisiae, GI6320148, Length=390, Percent_Identity=30.7692307692308, Blast_Score=175, Evalue=3e-44, Organism=Saccharomyces cerevisiae, GI6320417, Length=443, Percent_Identity=21.2189616252822, Blast_Score=81, Evalue=7e-16, Organism=Drosophila melanogaster, GI21355443, Length=362, Percent_Identity=32.5966850828729, Blast_Score=179, Evalue=1e-44, Organism=Drosophila melanogaster, GI24644084, Length=362, Percent_Identity=32.5966850828729, Blast_Score=179, Evalue=1e-44, Organism=Drosophila melanogaster, GI24653912, Length=375, Percent_Identity=26.1333333333333, Blast_Score=100, Evalue=5e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005844 - InterPro: IPR016055 - InterPro: IPR005845 - InterPro: IPR005846 - InterPro: IPR005843 - InterPro: IPR016066 - InterPro: IPR005841 [H]
Pfam domain/function: PF02878 PGM_PMM_I; PF02879 PGM_PMM_II; PF02880 PGM_PMM_III; PF00408 PGM_PMM_IV [H]
EC number: =5.4.2.10 [H]
Molecular weight: Translated: 92112; Mature: 92112
Theoretical pI: Translated: 5.12; Mature: 5.12
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAVLMAGGEGSRLRPLTISRPKPMVPLVDRPVMGHIIELLKRHGITDIIITVQYLANII CCEEEEECCCCCEECEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHHHHHH QDFYGDGSAFDVDISYSVEEVPLGTAGAVKYASRLIDDDSEPILVISGDALTDFDLTALI HHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH EAHKRSNAKATITLTRVPNPLEYGVVITDDTGRIRQFLEKPSWGEVFSDTVNTGIYVIDP HHHHCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHCCCEEEECC CVLDDIPLGEPFDFSKDLFPALLRRGELLHGYIAEGYWTDVGNIEAYMRACSDYLMGMVN EEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHC LPRLGHDRGDNVWIEGEVEIAPDAQIHGPVFFGHGVKIKGGAMVFGPSVIRDYTIIDSRA CCCCCCCCCCCEEEEEEEEECCCCEECCCEEECCCEEEECCEEEECCHHHHEEEEECCCC TIDRSIMWRNSYVGERAELRGAIVCKQCNIKSRSLLFEGVVVADSTIINAGAVIQPNVKI CCCHHEEECCCCCCCHHHCCEEEEEEECCCCCHHEEEEEEEEECCEEECCCCEECCCCEE WPSKEVEEGATVSASIIWGAQGRRVLFGRYGITGLVNIDLTPEFCAKLGAAYGAILPKNT CCCCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCC TVTMNRDAHYTPRMLKRGLIAGIPSAGINVLDLHSVPIPTARYLTYALNAAGGMHVRLSP EEEECCCCCCCHHHHHCCHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECC FDNRVVDIKFFDHRGLDLGSDMERKIENTYFREDYRRVYLDEIGRITENSDYNSVYIDKF CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHH MESLDPHILPELEDPWSIVIDYASSNAAQILGILLRRLNVDLVELNAQIDEDRLFQTADQ HHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH FNAGMQRLTAIVPVMNADIGVRLDSGGERIYVVDDTGHRLTDIELLAAVTALTMEANKGG HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCC TVAVPVTAPRLFDKLAERYGGRIQRTKTALGALMQQAAKCNDLCVLGDAAGSLIFPSFFP EEEEEECCHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHH VADGLFAIVKLMELLARAKIPLSEIRRSLPRSAMANHKVPCRWESKGKVMRILNEQYAER HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHH AQDNIDGIKIDLGPEWVLILPDPDGPFIHVIAEGVNDDQARVLTEKYAGLVMGLQ HHCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCC >Mature Secondary Structure MKAVLMAGGEGSRLRPLTISRPKPMVPLVDRPVMGHIIELLKRHGITDIIITVQYLANII CCEEEEECCCCCEECEEEECCCCCCCCCCCCCHHHHHHHHHHHCCCHHEEHHHHHHHHHH QDFYGDGSAFDVDISYSVEEVPLGTAGAVKYASRLIDDDSEPILVISGDALTDFDLTALI HHHCCCCCEEEEEEECCHHHCCCCCHHHHHHHHHHHCCCCCCEEEEECCCCCCCHHHHHH EAHKRSNAKATITLTRVPNPLEYGVVITDDTGRIRQFLEKPSWGEVFSDTVNTGIYVIDP HHHHCCCCEEEEEEEECCCCCCCCEEEECCCHHHHHHHHCCCCHHHHHHHHCCCEEEECC CVLDDIPLGEPFDFSKDLFPALLRRGELLHGYIAEGYWTDVGNIEAYMRACSDYLMGMVN EEECCCCCCCCCCCCHHHHHHHHHCCCEEEEEECCCEECCCCCHHHHHHHHHHHHHHHHC LPRLGHDRGDNVWIEGEVEIAPDAQIHGPVFFGHGVKIKGGAMVFGPSVIRDYTIIDSRA CCCCCCCCCCCEEEEEEEEECCCCEECCCEEECCCEEEECCEEEECCHHHHEEEEECCCC TIDRSIMWRNSYVGERAELRGAIVCKQCNIKSRSLLFEGVVVADSTIINAGAVIQPNVKI CCCHHEEECCCCCCCHHHCCEEEEEEECCCCCHHEEEEEEEEECCEEECCCCEECCCCEE WPSKEVEEGATVSASIIWGAQGRRVLFGRYGITGLVNIDLTPEFCAKLGAAYGAILPKNT CCCCCCCCCCEEEEEEEECCCCCEEEEEECCCEEEEEECCCHHHHHHHHHHHCCCCCCCC TVTMNRDAHYTPRMLKRGLIAGIPSAGINVLDLHSVPIPTARYLTYALNAAGGMHVRLSP EEEECCCCCCCHHHHHCCHHCCCCCCCCEEEEECCCCCCHHHHHHHHHHCCCCEEEEECC FDNRVVDIKFFDHRGLDLGSDMERKIENTYFREDYRRVYLDEIGRITENSDYNSVYIDKF CCCEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEHHHH MESLDPHILPELEDPWSIVIDYASSNAAQILGILLRRLNVDLVELNAQIDEDRLFQTADQ HHHCCCCCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHCCEEEEECCCCCHHHHHHHHHH FNAGMQRLTAIVPVMNADIGVRLDSGGERIYVVDDTGHRLTDIELLAAVTALTMEANKGG HHHHHHHHHHHHHHCCCCEEEEECCCCCEEEEECCCCCCCHHHHHHHHHHHHEEECCCCC TVAVPVTAPRLFDKLAERYGGRIQRTKTALGALMQQAAKCNDLCVLGDAAGSLIFPSFFP EEEEEECCHHHHHHHHHHHCCEEHHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHH VADGLFAIVKLMELLARAKIPLSEIRRSLPRSAMANHKVPCRWESKGKVMRILNEQYAER HHHHHHHHHHHHHHHHHCCCCHHHHHHHCCHHHHHCCCCCEEECCCCHHHHHHHHHHHHH AQDNIDGIKIDLGPEWVLILPDPDGPFIHVIAEGVNDDQARVLTEKYAGLVMGLQ HHCCCCEEEEEECCCEEEEEECCCCCEEEEEECCCCCCHHHHHHHHHCCEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA