Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899903
Identifier: 159899903
GI number: 159899903
Start: 4269157
End: 4270002
Strand: Direct
Name: 159899903
Synonym: Haur_3386
Alternate gene names: NA
Gene position: 4269157-4270002 (Clockwise)
Preceding gene: 159899902
Following gene: 159899904
Centisome position: 67.27
GC content: 55.91
Gene sequence:
>846_bases ATGAATACATTGCTTCAACAATTGATTGCTGCGTTGCTCTACCCGGGCATGCTCACCACAATGTTGTTAACCCTCGCCGT GATTGGCATTACCAAGTTGCATGCGCCTGGGGGTGGCTTAAGCCGTGGTTTTTTAGCAGCCTTGCAGGGCAAAACTTCGC TCAATCTAGCGCTAGCAGCACTTTTGGCGCTGATTGCCCCAGCATTTTTGCCATGGGCTGGCTCGCCACTGGCAACACCC CGCTTGGGCCAATTATGGTTGGCTTGGGCCTTGCTTGAAACCTCGTTTATGCTAGCGCTCATGCCTGGCTTGCAAAGTTT GGCCGCTTCGAGCGTGCGAGCCGCCATGCGCGAGGCCCAACTCAGCAGCGCAGGGCGAATTGTGTTGTGGTTAGCGCTGG GGGTGGCCCTTTGGACAGGCGATAATTGGCAGTGGAACATTGTGCCAGCCCGGGTTTTGGCATTAATCGCAGCAGCAATG GCTTTGCCGGTGGCGCTTGGTTGGGGGCCATTTGCCCACGATTGGAGCCTCACCCCAGGCGGTCCCGAAGCCGAACTTAA CCGTGCTAGTGCTGAGCTAGCCCAATGGGGTCGCGCAATTCGAGCGACTGTCTTGTTAACCTTGATTCCACTCTTGGGTT TTCCAATCACGGCAGGCTTGCATTGGTCGCTGCATGTAGCCTTGACCATCGCTACGACCTTGGCTTTGGCGGGAGTTGGC CGTTATATTAATGGTTCAACGGTGCGCCAACCCTTGAACGAGAGTTTGCGTTGGTGTTACACCCGCGCCTTGCCTTTAGC CTTGCTGAGCGGAATTGTCTTGGTTGCGATGCAGCGCTGGCTGTAG
Upstream 100 bases:
>100_bases AGCCGCCAAAATCGATGGCGATCCACCGACGGTTGCGGCAATTCAGGCCGGAATTGTCCAAGCCCTCAATGCCCGTACCG CCAAACACTAAAGGTCGTTT
Downstream 100 bases:
>100_bases GAGAGAAGCGATGACTGCCTTATTGCTTGAGAAAATCGTCAAACGTTTTGATACAACAACCATTTTGCGTCAACTCAATT TGCTGGTGCAAGAAGGTCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNTLLQQLIAALLYPGMLTTMLLTLAVIGITKLHAPGGGLSRGFLAALQGKTSLNLALAALLALIAPAFLPWAGSPLATP RLGQLWLAWALLETSFMLALMPGLQSLAASSVRAAMREAQLSSAGRIVLWLALGVALWTGDNWQWNIVPARVLALIAAAM ALPVALGWGPFAHDWSLTPGGPEAELNRASAELAQWGRAIRATVLLTLIPLLGFPITAGLHWSLHVALTIATTLALAGVG RYINGSTVRQPLNESLRWCYTRALPLALLSGIVLVAMQRWL
Sequences:
>Translated_281_residues MNTLLQQLIAALLYPGMLTTMLLTLAVIGITKLHAPGGGLSRGFLAALQGKTSLNLALAALLALIAPAFLPWAGSPLATP RLGQLWLAWALLETSFMLALMPGLQSLAASSVRAAMREAQLSSAGRIVLWLALGVALWTGDNWQWNIVPARVLALIAAAM ALPVALGWGPFAHDWSLTPGGPEAELNRASAELAQWGRAIRATVLLTLIPLLGFPITAGLHWSLHVALTIATTLALAGVG RYINGSTVRQPLNESLRWCYTRALPLALLSGIVLVAMQRWL >Mature_281_residues MNTLLQQLIAALLYPGMLTTMLLTLAVIGITKLHAPGGGLSRGFLAALQGKTSLNLALAALLALIAPAFLPWAGSPLATP RLGQLWLAWALLETSFMLALMPGLQSLAASSVRAAMREAQLSSAGRIVLWLALGVALWTGDNWQWNIVPARVLALIAAAM ALPVALGWGPFAHDWSLTPGGPEAELNRASAELAQWGRAIRATVLLTLIPLLGFPITAGLHWSLHVALTIATTLALAGVG RYINGSTVRQPLNESLRWCYTRALPLALLSGIVLVAMQRWL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29833; Mature: 29833
Theoretical pI: Translated: 11.55; Mature: 11.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTLLQQLIAALLYPGMLTTMLLTLAVIGITKLHAPGGGLSRGFLAALQGKTSLNLALAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHH LLALIAPAFLPWAGSPLATPRLGQLWLAWALLETSFMLALMPGLQSLAASSVRAAMREAQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSAGRIVLWLALGVALWTGDNWQWNIVPARVLALIAAAMALPVALGWGPFAHDWSLTPG HHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GPEAELNRASAELAQWGRAIRATVLLTLIPLLGFPITAGLHWSLHVALTIATTLALAGVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHH RYINGSTVRQPLNESLRWCYTRALPLALLSGIVLVAMQRWL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MNTLLQQLIAALLYPGMLTTMLLTLAVIGITKLHAPGGGLSRGFLAALQGKTSLNLALAA CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCCCHHHHHHHH LLALIAPAFLPWAGSPLATPRLGQLWLAWALLETSFMLALMPGLQSLAASSVRAAMREAQ HHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSSAGRIVLWLALGVALWTGDNWQWNIVPARVLALIAAAMALPVALGWGPFAHDWSLTPG HHCCCHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC GPEAELNRASAELAQWGRAIRATVLLTLIPLLGFPITAGLHWSLHVALTIATTLALAGVG CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHH RYINGSTVRQPLNESLRWCYTRALPLALLSGIVLVAMQRWL HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA