Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899861

Identifier: 159899861

GI number: 159899861

Start: 4215732

End: 4217276

Strand: Direct

Name: 159899861

Synonym: Haur_3344

Alternate gene names: NA

Gene position: 4215732-4217276 (Clockwise)

Preceding gene: 159899859

Following gene: 159899862

Centisome position: 66.43

GC content: 52.49

Gene sequence:

>1545_bases
ATGACGGGTGAGGCTCACGACATCCCAGTGCCCCAAGCCTCGTTTTGTCTAAGTAGCAACCATGTGCGTTGCCCATTATA
TGCAGGTGAAGATCTGCCGGTTGCGCAGGTTATCAGCACGCCTACGCCAGTTGCGGTGGGTGGTTGGCGCGGCTGGCTGG
CTGGTTTATCGACCCGCGATCGCCGCATTTATGCCACCTTGGTGGGCCTACTTGGCTTAATTATTGTGGCCTATGCGATT
AGCGGCGTTGTTTTATTTAGCAACCCCGATAACCCTGCCACGCCTAGCGCTACCTCGCAAGTGCTTCAGCCAACATCCGA
TAGCCCAACATTAACGGTTTCACCATCGCCAAATGCCTTTGCCACAGCAGCGGTTCGTCAAACTCAAACAGCCGAAGTTA
TTGCTCAAACCACTACCGTCACTCCCTCGGTCTCTGCTACGTCATCGGCTTCTGCAACCACTCAGGTGATTCTTGCATCG
CCAACCTTTGTTATTGTACCGCCAACTGAAGATGTGATTGTCGCCTCTGCTACTCCTAGCATTCCGTTTGCCACCGATCT
CCCAACCTTTGAGCCAACGTTATCGCCAATTGCGACAACTGCCGTGCCAACGCTTGAACCAACCGCAGAACCGACTGTTG
AACCAACTCTTGAGCCAACGCTCGAACCAACAGTTGAGCCGACTGTCGAGCCAACGCCTGAACCGATCCCTGAGCCAACT
GCTCAGCCGACCGAGGAAACTGGCGGTCGCGAGGTTAATCAATTAACCTTGTTTTTTGCCGATAGCACTGGCCAAGTGTT
AGTGCCAGTCTCGCGCCAGATTGCGGCAACTCGTCAGTCACGGACTGCCGCAATCCAACAGTTAATTCAAGGTGCACGCA
GCGATTTGCGTAGTTTGTTGCCCAGCGATACCCAATTACTTGGGCTACGCTTGAATAATGGCATTGCTACCGCTAATTTT
AACCGTATCCCGACGTTTGGCAATTCAAGCCTCGAAGATTTGGGTTTGCGTTCGATTGTGTTGGCCTTGACTGAGCAACC
AGAGGTTAAGCAGGTGCAAATTCAAGTCCAAGGCCAAAATTTAGGTGGCCTGCGCTATCGTCCCAATGTCAACCCCGATA
ATCCGCAGGGTTTAAATGGTCAGTTTAACACAACTTCGTTCTTGCCGTTATATTTTCAGCAAAGTAGTGGCCGTTGGGTG
CGGGTGATGCGGCTTGTGCCAAGCACCAAAACCGAGGCCCGCGCTACCGTCAATGAGCTGATTCGCGGAGCTGGCCGTTA
TAGTCATGTTGTTAGTAGTGCCATCCCGAGCGCCAGCCAAGTACGGCGTTTGGTGATTGTTGATGGGGTTGCTCAACTTG
ATCTTAGCGCTGAATTCAGCCAAACCAGCAATCCGCAGGCGGCGGTTGATGCCTTGGTCTTGGCGTTAACTTCGTTCAGT
AGTGTGCAACAGGTACAGATTACCGTCGAAGGCCAATCGCTCAGCAGCATTTGGGGCGCAACATTCAGCAATCCTTTCGT
TCGCCCACAACTTAACCCTGAATAG

Upstream 100 bases:

>100_bases
GAGGAACGTCGTGGAACCAGTGCATCACTGCCCATATGTGGGCCTTAAACAAAATCGTGCGATTCGTTTCGCGAGTCCTA
CGCCGGAGCACCGCTGCTAC

Downstream 100 bases:

>100_bases
CATTAATTGGGGATCGGTTGTTGGGGGTTGGGGATCGGGACGTAGGGCTATTGGCTTTTGGCTATGGAATGGTGTATTGG
ATTACCATTCCCTCACCCCT

Product: PT repeat-containing protein

Products: NA

Alternate protein names: Germination Protein; PT Repeat-Containing Protein; Spore Germination Protein-Like

Number of amino acids: Translated: 514; Mature: 513

Protein sequence:

>514_residues
MTGEAHDIPVPQASFCLSSNHVRCPLYAGEDLPVAQVISTPTPVAVGGWRGWLAGLSTRDRRIYATLVGLLGLIIVAYAI
SGVVLFSNPDNPATPSATSQVLQPTSDSPTLTVSPSPNAFATAAVRQTQTAEVIAQTTTVTPSVSATSSASATTQVILAS
PTFVIVPPTEDVIVASATPSIPFATDLPTFEPTLSPIATTAVPTLEPTAEPTVEPTLEPTLEPTVEPTVEPTPEPIPEPT
AQPTEETGGREVNQLTLFFADSTGQVLVPVSRQIAATRQSRTAAIQQLIQGARSDLRSLLPSDTQLLGLRLNNGIATANF
NRIPTFGNSSLEDLGLRSIVLALTEQPEVKQVQIQVQGQNLGGLRYRPNVNPDNPQGLNGQFNTTSFLPLYFQQSSGRWV
RVMRLVPSTKTEARATVNELIRGAGRYSHVVSSAIPSASQVRRLVIVDGVAQLDLSAEFSQTSNPQAAVDALVLALTSFS
SVQQVQITVEGQSLSSIWGATFSNPFVRPQLNPE

Sequences:

>Translated_514_residues
MTGEAHDIPVPQASFCLSSNHVRCPLYAGEDLPVAQVISTPTPVAVGGWRGWLAGLSTRDRRIYATLVGLLGLIIVAYAI
SGVVLFSNPDNPATPSATSQVLQPTSDSPTLTVSPSPNAFATAAVRQTQTAEVIAQTTTVTPSVSATSSASATTQVILAS
PTFVIVPPTEDVIVASATPSIPFATDLPTFEPTLSPIATTAVPTLEPTAEPTVEPTLEPTLEPTVEPTVEPTPEPIPEPT
AQPTEETGGREVNQLTLFFADSTGQVLVPVSRQIAATRQSRTAAIQQLIQGARSDLRSLLPSDTQLLGLRLNNGIATANF
NRIPTFGNSSLEDLGLRSIVLALTEQPEVKQVQIQVQGQNLGGLRYRPNVNPDNPQGLNGQFNTTSFLPLYFQQSSGRWV
RVMRLVPSTKTEARATVNELIRGAGRYSHVVSSAIPSASQVRRLVIVDGVAQLDLSAEFSQTSNPQAAVDALVLALTSFS
SVQQVQITVEGQSLSSIWGATFSNPFVRPQLNPE
>Mature_513_residues
TGEAHDIPVPQASFCLSSNHVRCPLYAGEDLPVAQVISTPTPVAVGGWRGWLAGLSTRDRRIYATLVGLLGLIIVAYAIS
GVVLFSNPDNPATPSATSQVLQPTSDSPTLTVSPSPNAFATAAVRQTQTAEVIAQTTTVTPSVSATSSASATTQVILASP
TFVIVPPTEDVIVASATPSIPFATDLPTFEPTLSPIATTAVPTLEPTAEPTVEPTLEPTLEPTVEPTVEPTPEPIPEPTA
QPTEETGGREVNQLTLFFADSTGQVLVPVSRQIAATRQSRTAAIQQLIQGARSDLRSLLPSDTQLLGLRLNNGIATANFN
RIPTFGNSSLEDLGLRSIVLALTEQPEVKQVQIQVQGQNLGGLRYRPNVNPDNPQGLNGQFNTTSFLPLYFQQSSGRWVR
VMRLVPSTKTEARATVNELIRGAGRYSHVVSSAIPSASQVRRLVIVDGVAQLDLSAEFSQTSNPQAAVDALVLALTSFSS
VQQVQITVEGQSLSSIWGATFSNPFVRPQLNPE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54476; Mature: 54345

Theoretical pI: Translated: 4.57; Mature: 4.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGEAHDIPVPQASFCLSSNHVRCPLYAGEDLPVAQVISTPTPVAVGGWRGWLAGLSTRD
CCCCCCCCCCCCHHHEECCCCEEEEEECCCCCCHHHHHCCCCCEEECCHHHHHHCCCCCC
RRIYATLVGLLGLIIVAYAISGVVLFSNPDNPATPSATSQVLQPTSDSPTLTVSPSPNAF
CHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCH
ATAAVRQTQTAEVIAQTTTVTPSVSATSSASATTQVILASPTFVIVPPTEDVIVASATPS
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCC
IPFATDLPTFEPTLSPIATTAVPTLEPTAEPTVEPTLEPTLEPTVEPTVEPTPEPIPEPT
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPTEETGGREVNQLTLFFADSTGQVLVPVSRQIAATRQSRTAAIQQLIQGARSDLRSLL
CCCCHHCCCCEEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSDTQLLGLRLNNGIATANFNRIPTFGNSSLEDLGLRSIVLALTEQPEVKQVQIQVQGQN
CCCCEEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCEEEEEEEECCC
LGGLRYRPNVNPDNPQGLNGQFNTTSFLPLYFQQSSGRWVRVMRLVPSTKTEARATVNEL
CCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
IRGAGRYSHVVSSAIPSASQVRRLVIVDGVAQLDLSAEFSQTSNPQAAVDALVLALTSFS
HHCCCHHHHHHHHHCCCHHHCEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
SVQQVQITVEGQSLSSIWGATFSNPFVRPQLNPE
CEEEEEEEEECCCHHHHHCHHCCCCCCCCCCCCC
>Mature Secondary Structure 
TGEAHDIPVPQASFCLSSNHVRCPLYAGEDLPVAQVISTPTPVAVGGWRGWLAGLSTRD
CCCCCCCCCCCHHHEECCCCEEEEEECCCCCCHHHHHCCCCCEEECCHHHHHHCCCCCC
RRIYATLVGLLGLIIVAYAISGVVLFSNPDNPATPSATSQVLQPTSDSPTLTVSPSPNAF
CHHHHHHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHCCCCCCCEEEECCCCCCH
ATAAVRQTQTAEVIAQTTTVTPSVSATSSASATTQVILASPTFVIVPPTEDVIVASATPS
HHHHHHHHHHHHHHEEEEECCCCCCCCCCCCCEEEEEEECCEEEEECCCCCEEEEECCCC
IPFATDLPTFEPTLSPIATTAVPTLEPTAEPTVEPTLEPTLEPTVEPTVEPTPEPIPEPT
CCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
AQPTEETGGREVNQLTLFFADSTGQVLVPVSRQIAATRQSRTAAIQQLIQGARSDLRSLL
CCCCHHCCCCEEEEEEEEEECCCCCEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
PSDTQLLGLRLNNGIATANFNRIPTFGNSSLEDLGLRSIVLALTEQPEVKQVQIQVQGQN
CCCCEEEEEEECCCEEECCCCCCCCCCCCCHHHHHHHHEEHHHCCCCCCEEEEEEEECCC
LGGLRYRPNVNPDNPQGLNGQFNTTSFLPLYFQQSSGRWVRVMRLVPSTKTEARATVNEL
CCCEEECCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHH
IRGAGRYSHVVSSAIPSASQVRRLVIVDGVAQLDLSAEFSQTSNPQAAVDALVLALTSFS
HHCCCHHHHHHHHHCCCHHHCEEEEEECCHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCC
SVQQVQITVEGQSLSSIWGATFSNPFVRPQLNPE
CEEEEEEEEECCCHHHHHCHHCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA