Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899856
Identifier: 159899856
GI number: 159899856
Start: 4208713
End: 4210575
Strand: Direct
Name: 159899856
Synonym: Haur_3339
Alternate gene names: NA
Gene position: 4208713-4210575 (Clockwise)
Preceding gene: 159899853
Following gene: 159899857
Centisome position: 66.31
GC content: 53.84
Gene sequence:
>1863_bases ATGCGTCGCTGGCGAATCTGCCTTTTGCTGTGGATGTTGGTGGGTTGTAGCGCAACCGCACCGACAACCAGCACCCAAAT TCCAATTCAACCAAGCTTGCCAACTCCAGCTCAAACTCTCAGCCCGACTCAAGCATTGGCCACAAGCATCCCAATAATTG CCGATGAAGCGGCGGTGGAACGAGCCAGCCAACAAGGGCTTGAGCGCGATTTAGCCCAACTTGCCGTTGATTGGCGCTTG ATTAGCGAAAAACCTCAACCACTGCGTTTGGAAATGCCCCCACCATACGAGCGCCGTAGCTTTTGGGTTACCGATTTAAC CAGCAATCAACAGCGCAATATCAGTGCCACCCTTCAACTCAGCACCACCCACTTATTAATTTATGTCGCCGATGATTTGC CGGTTGAGCAACAAGCGCTGATTAATGCTGCTCAGCAATTTGAACAGGTTGGTTGGCCGTTGCTAGCCAAATGGTATCCG CAACAGGCTTGGCCCCAAGTACCTGTAACCGTCTTGAATGCTGCGGTCAACGGGGCGGGCGGCTATTACGCCAGCGATAA CGAATTACCCCAAGCGATCAATCCATATTCCAACGAACGCGAGATGTTGGTGATTAACGCTGCGGCCATGCCACCCAGCG ATTTTGGCTATGTCGCCACGTTAATTCACGAAATGCAGCATCTGTTGCATCGGAATGTGCTGAGCCACCCCGCCACTTGG CTCAACGAAGGCGCTTCGATGTTGAGCGAAGATCGTTCAGGCTATAGCAACGATAGCTTGGCACTCGATTTTCTGGCCTC GCCGGATACCCAACTCAATGCGTGGGCCAGCAGCCCTGGCACTGCGCTCAAACATTATGGCGCGGCTCAGCTGTTCCTCA GTTACCTTGATCAGCAACTCGACGGCTTGCCGATGGGAACCTTGGCGGCGGCTGATGCTGGCGATAATTTGACCAGCATT ACCAGTTTGATGACCACCCGCTATCCCGATTTAACCAGCTTTGATCAGCTGTTTGCGGCGTGGGCAGTCGCCAATTGGGT GAATGATCCAACGGTGGCTGATGGCCGTTATGGCTACGATCTGCCCCGCGCTGTGTTGCCAGAGCAGGCCCAGAGCAGCG AACAAAACCTGAGCATTCGGCAATTTGGCAGCGATTATTTGGCCTTTGAGAACGCCAGTAGCGAACGAACGCTCGAATGG CAGGGCAACAACACAGTGCCTATTTTCGCCGCCGATGTGACAAGTAGCGCCACATGGTGGAGCGGGCGTGGCGATGCGCG GGTCAGCACGCTCACCACAGCAATTCAAGTGCCTAGCGCGGGCGGCAGCCTGATTTATCGACGGTGGTTTGATTTAGAGC AAGATTACGATTATGCCTATCTCAGTCTTTCGCAAGATAACGGCCAAACCTGGCAAGCAATTGCGACCCAAGCCAGTACT GGAGCCAATCCGGTTGGCTTGAATATTGGGGCTGGCTGGACAGGCCAACAAACCACGTGGCAAGCAGAAAGCGTTGATCT CACGCCGTGGGCAGGCCAACAGATTCAATTGCGATTTTGGGTGATCAACGATGAAGCGTATAATGCTGCTGGTTTAGCCT TGAGCGATCTGACAATCGATGGGGTAACGGCTGAATGGGTTGGGACTGGCTTTGTGCCAGTTCGTAATCAATTGGCACAG CGTTGGGTGCTCACGGCGGTGCTCTATGATCAAGCTGGGGTTGCGGAAGTTGTCTCAATTCCAACCGATAATGGCCAAGC GCGTTGGCTGATTCCGGCCAATCGGCGAGCGGTTTTGGTGGTCAATGCCACAACTCAAGGCACCACCGAAGCAGCCAATT ACAGCTATAACGTCACACCGTAG
Upstream 100 bases:
>100_bases CTGGCTAACGGAGGATACTGCGATTATAGATGGCAATATATGCCATGTCTACCAAGGTTCTGTGCTATCCTGATAGCAAA ATTGCGATAAGGATAATGGT
Downstream 100 bases:
>100_bases TATAATTGGGCAGCCCTAGCTTAGATGGATTGAGGATTGGCTCATGACTGAAAGCGTCGCAATGACTGAGCAGCCTAGTC AAACAGCTGCGATAACTCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 620; Mature: 620
Protein sequence:
>620_residues MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVERASQQGLERDLAQLAVDWRL ISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQLSTTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYP QQAWPQVPVTVLNAAVNGAGGYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQLDGLPMGTLAAADAGDNLTSI TSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYDLPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEW QGNNTVPIFAADVTSSATWWSGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTIDGVTAEWVGTGFVPVRNQLAQ RWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLVVNATTQGTTEAANYSYNVTP
Sequences:
>Translated_620_residues MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVERASQQGLERDLAQLAVDWRL ISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQLSTTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYP QQAWPQVPVTVLNAAVNGAGGYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQLDGLPMGTLAAADAGDNLTSI TSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYDLPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEW QGNNTVPIFAADVTSSATWWSGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTIDGVTAEWVGTGFVPVRNQLAQ RWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLVVNATTQGTTEAANYSYNVTP >Mature_620_residues MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVERASQQGLERDLAQLAVDWRL ISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQLSTTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYP QQAWPQVPVTVLNAAVNGAGGYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQLDGLPMGTLAAADAGDNLTSI TSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYDLPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEW QGNNTVPIFAADVTSSATWWSGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTIDGVTAEWVGTGFVPVRNQLAQ RWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLVVNATTQGTTEAANYSYNVTP
Specific function: Unknown
COG id: COG4412
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 67929; Mature: 67929
Theoretical pI: Translated: 4.22; Mature: 4.22
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVE CCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHCCHHHHHHHCCCEEECHHHHH RASQQGLERDLAQLAVDWRLISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQL HHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEE STTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYPQQAWPQVPVTVLNAAVNGAG EEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCC GYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW CCCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQL HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHH DGLPMGTLAAADAGDNLTSITSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYD CCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEWQGNNTVPIFAADVTSSATWW CCHHHCCHHHCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCCCEE SGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST CCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHCCC GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTID CCCCEEEECCCCCCCCCCEEECCCEECCCCCCCEEEEEEEEEECCCCCCCCEEEECEEEC GVTAEWVGTGFVPVRNQLAQRWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLV CEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCEEEEE VNATTQGTTEAANYSYNVTP EECCCCCCCCCCCEEEECCC >Mature Secondary Structure MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVE CCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHCCHHHHHHHCCCEEECHHHHH RASQQGLERDLAQLAVDWRLISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQL HHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEE STTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYPQQAWPQVPVTVLNAAVNGAG EEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCC GYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW CCCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQL HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHH DGLPMGTLAAADAGDNLTSITSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYD CCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC LPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEWQGNNTVPIFAADVTSSATWW CCHHHCCHHHCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCCCEE SGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST CCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHCCC GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTID CCCCEEEECCCCCCCCCCEEECCCEECCCCCCCEEEEEEEEEECCCCCCCCEEEECEEEC GVTAEWVGTGFVPVRNQLAQRWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLV CEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCEEEEE VNATTQGTTEAANYSYNVTP EECCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA