Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899856

Identifier: 159899856

GI number: 159899856

Start: 4208713

End: 4210575

Strand: Direct

Name: 159899856

Synonym: Haur_3339

Alternate gene names: NA

Gene position: 4208713-4210575 (Clockwise)

Preceding gene: 159899853

Following gene: 159899857

Centisome position: 66.31

GC content: 53.84

Gene sequence:

>1863_bases
ATGCGTCGCTGGCGAATCTGCCTTTTGCTGTGGATGTTGGTGGGTTGTAGCGCAACCGCACCGACAACCAGCACCCAAAT
TCCAATTCAACCAAGCTTGCCAACTCCAGCTCAAACTCTCAGCCCGACTCAAGCATTGGCCACAAGCATCCCAATAATTG
CCGATGAAGCGGCGGTGGAACGAGCCAGCCAACAAGGGCTTGAGCGCGATTTAGCCCAACTTGCCGTTGATTGGCGCTTG
ATTAGCGAAAAACCTCAACCACTGCGTTTGGAAATGCCCCCACCATACGAGCGCCGTAGCTTTTGGGTTACCGATTTAAC
CAGCAATCAACAGCGCAATATCAGTGCCACCCTTCAACTCAGCACCACCCACTTATTAATTTATGTCGCCGATGATTTGC
CGGTTGAGCAACAAGCGCTGATTAATGCTGCTCAGCAATTTGAACAGGTTGGTTGGCCGTTGCTAGCCAAATGGTATCCG
CAACAGGCTTGGCCCCAAGTACCTGTAACCGTCTTGAATGCTGCGGTCAACGGGGCGGGCGGCTATTACGCCAGCGATAA
CGAATTACCCCAAGCGATCAATCCATATTCCAACGAACGCGAGATGTTGGTGATTAACGCTGCGGCCATGCCACCCAGCG
ATTTTGGCTATGTCGCCACGTTAATTCACGAAATGCAGCATCTGTTGCATCGGAATGTGCTGAGCCACCCCGCCACTTGG
CTCAACGAAGGCGCTTCGATGTTGAGCGAAGATCGTTCAGGCTATAGCAACGATAGCTTGGCACTCGATTTTCTGGCCTC
GCCGGATACCCAACTCAATGCGTGGGCCAGCAGCCCTGGCACTGCGCTCAAACATTATGGCGCGGCTCAGCTGTTCCTCA
GTTACCTTGATCAGCAACTCGACGGCTTGCCGATGGGAACCTTGGCGGCGGCTGATGCTGGCGATAATTTGACCAGCATT
ACCAGTTTGATGACCACCCGCTATCCCGATTTAACCAGCTTTGATCAGCTGTTTGCGGCGTGGGCAGTCGCCAATTGGGT
GAATGATCCAACGGTGGCTGATGGCCGTTATGGCTACGATCTGCCCCGCGCTGTGTTGCCAGAGCAGGCCCAGAGCAGCG
AACAAAACCTGAGCATTCGGCAATTTGGCAGCGATTATTTGGCCTTTGAGAACGCCAGTAGCGAACGAACGCTCGAATGG
CAGGGCAACAACACAGTGCCTATTTTCGCCGCCGATGTGACAAGTAGCGCCACATGGTGGAGCGGGCGTGGCGATGCGCG
GGTCAGCACGCTCACCACAGCAATTCAAGTGCCTAGCGCGGGCGGCAGCCTGATTTATCGACGGTGGTTTGATTTAGAGC
AAGATTACGATTATGCCTATCTCAGTCTTTCGCAAGATAACGGCCAAACCTGGCAAGCAATTGCGACCCAAGCCAGTACT
GGAGCCAATCCGGTTGGCTTGAATATTGGGGCTGGCTGGACAGGCCAACAAACCACGTGGCAAGCAGAAAGCGTTGATCT
CACGCCGTGGGCAGGCCAACAGATTCAATTGCGATTTTGGGTGATCAACGATGAAGCGTATAATGCTGCTGGTTTAGCCT
TGAGCGATCTGACAATCGATGGGGTAACGGCTGAATGGGTTGGGACTGGCTTTGTGCCAGTTCGTAATCAATTGGCACAG
CGTTGGGTGCTCACGGCGGTGCTCTATGATCAAGCTGGGGTTGCGGAAGTTGTCTCAATTCCAACCGATAATGGCCAAGC
GCGTTGGCTGATTCCGGCCAATCGGCGAGCGGTTTTGGTGGTCAATGCCACAACTCAAGGCACCACCGAAGCAGCCAATT
ACAGCTATAACGTCACACCGTAG

Upstream 100 bases:

>100_bases
CTGGCTAACGGAGGATACTGCGATTATAGATGGCAATATATGCCATGTCTACCAAGGTTCTGTGCTATCCTGATAGCAAA
ATTGCGATAAGGATAATGGT

Downstream 100 bases:

>100_bases
TATAATTGGGCAGCCCTAGCTTAGATGGATTGAGGATTGGCTCATGACTGAAAGCGTCGCAATGACTGAGCAGCCTAGTC
AAACAGCTGCGATAACTCTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 620; Mature: 620

Protein sequence:

>620_residues
MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVERASQQGLERDLAQLAVDWRL
ISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQLSTTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYP
QQAWPQVPVTVLNAAVNGAGGYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW
LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQLDGLPMGTLAAADAGDNLTSI
TSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYDLPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEW
QGNNTVPIFAADVTSSATWWSGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST
GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTIDGVTAEWVGTGFVPVRNQLAQ
RWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLVVNATTQGTTEAANYSYNVTP

Sequences:

>Translated_620_residues
MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVERASQQGLERDLAQLAVDWRL
ISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQLSTTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYP
QQAWPQVPVTVLNAAVNGAGGYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW
LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQLDGLPMGTLAAADAGDNLTSI
TSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYDLPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEW
QGNNTVPIFAADVTSSATWWSGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST
GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTIDGVTAEWVGTGFVPVRNQLAQ
RWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLVVNATTQGTTEAANYSYNVTP
>Mature_620_residues
MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVERASQQGLERDLAQLAVDWRL
ISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQLSTTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYP
QQAWPQVPVTVLNAAVNGAGGYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW
LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQLDGLPMGTLAAADAGDNLTSI
TSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYDLPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEW
QGNNTVPIFAADVTSSATWWSGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST
GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTIDGVTAEWVGTGFVPVRNQLAQ
RWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLVVNATTQGTTEAANYSYNVTP

Specific function: Unknown

COG id: COG4412

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 67929; Mature: 67929

Theoretical pI: Translated: 4.22; Mature: 4.22

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVE
CCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHCCHHHHHHHCCCEEECHHHHH
RASQQGLERDLAQLAVDWRLISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQL
HHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEE
STTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYPQQAWPQVPVTVLNAAVNGAG
EEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCC
GYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW
CCCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQL
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHH
DGLPMGTLAAADAGDNLTSITSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYD
CCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEWQGNNTVPIFAADVTSSATWW
CCHHHCCHHHCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCCCEE
SGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST
CCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHCCC
GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTID
CCCCEEEECCCCCCCCCCEEECCCEECCCCCCCEEEEEEEEEECCCCCCCCEEEECEEEC
GVTAEWVGTGFVPVRNQLAQRWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLV
CEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCEEEEE
VNATTQGTTEAANYSYNVTP
EECCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MRRWRICLLLWMLVGCSATAPTTSTQIPIQPSLPTPAQTLSPTQALATSIPIIADEAAVE
CCHHHHHHHHHHHHCCCCCCCCCCCEEECCCCCCCCHHHCCHHHHHHHCCCEEECHHHHH
RASQQGLERDLAQLAVDWRLISEKPQPLRLEMPPPYERRSFWVTDLTSNQQRNISATLQL
HHHHHHHHHHHHHHHHHHHEECCCCCCEEECCCCCCCCCEEEEEECCCCCCCCEEEEEEE
STTHLLIYVADDLPVEQQALINAAQQFEQVGWPLLAKWYPQQAWPQVPVTVLNAAVNGAG
EEEEEEEEEECCCCCHHHHHHHHHHHHHHCCCCHHHHHCCCCCCCCCCHHHHHHHHCCCC
GYYASDNELPQAINPYSNEREMLVINAAAMPPSDFGYVATLIHEMQHLLHRNVLSHPATW
CCCCCCCCCCHHCCCCCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHH
LNEGASMLSEDRSGYSNDSLALDFLASPDTQLNAWASSPGTALKHYGAAQLFLSYLDQQL
HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCEEEECCCCCHHHHHCCHHHHHHHHHHHHH
DGLPMGTLAAADAGDNLTSITSLMTTRYPDLTSFDQLFAAWAVANWVNDPTVADGRYGYD
CCCCCCCEEECCCCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
LPRAVLPEQAQSSEQNLSIRQFGSDYLAFENASSERTLEWQGNNTVPIFAADVTSSATWW
CCHHHCCHHHCCCCCCCCHHHCCCCCEEEECCCCCCEEEECCCCEEEEEEECCCCCCCEE
SGRGDARVSTLTTAIQVPSAGGSLIYRRWFDLEQDYDYAYLSLSQDNGQTWQAIATQAST
CCCCCCEEEEEEEEEECCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCEEHHHHHHCCC
GANPVGLNIGAGWTGQQTTWQAESVDLTPWAGQQIQLRFWVINDEAYNAAGLALSDLTID
CCCCEEEECCCCCCCCCCEEECCCEECCCCCCCEEEEEEEEEECCCCCCCCEEEECEEEC
GVTAEWVGTGFVPVRNQLAQRWVLTAVLYDQAGVAEVVSIPTDNGQARWLIPANRRAVLV
CEEHHHHCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCEEEEE
VNATTQGTTEAANYSYNVTP
EECCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA