Definition Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome.
Accession NC_009972
Length 6,346,587

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The map label for this gene is 159899849

Identifier: 159899849

GI number: 159899849

Start: 4200736

End: 4201971

Strand: Direct

Name: 159899849

Synonym: Haur_3332

Alternate gene names: NA

Gene position: 4200736-4201971 (Clockwise)

Preceding gene: 159899848

Following gene: 159899850

Centisome position: 66.19

GC content: 51.05

Gene sequence:

>1236_bases
ATGCAGCAACAATTCAAAGAGTATGCGATTGTTACCGCCGCTTATTGGGCCTTTACATTGACCGATGGCGCGTTGCGTAT
GTTGGTCTTGTTTCATTTTCATCAACTTGGCTATAGTGCCTTGGCGGTGGCGGCGCTCTTTATTTTCTATGAAGTATTTG
GGGTGATTACCAATTTGTTTGGTGGCTGGCTGGGCGCACGCTTTGGCCTGAATCGCACCTTACATGCTGGCTTGGTGTTA
CAAGTTATCGCTTTGGGCATGATGGTTGTGCCCAGTGCTTGGCTCAGCGTGACATATGTGATGCTAGCGCAAGCTGGCTC
GGGCATCGCCAAAGATCTGACCAAAATGAGTGCCAAGAGCAGCATCAAAATGTTGGTGGCTGAAGATGCTCAATCAACTT
TGTTCAAATGGGTAGCTATTTTGACTGGCTCGAAAAATGCGCTCAAAGGTGTGGGCTTTTTCTTGGGCAGCCTATTGCTG
AGCACCATTGGCTTTCGCAGTGCCTTCGCTGTGCTTGCGAGTTTGATTGCCGTAGCTGCCATTGGCACATTCAGCTTTTT
GCAACACGATTTGGGGCGTAGCAAAGCCAAGCCGAAGTGGCAACAACTATTTGCCAAAAGCCGCGCGATCAATCTGCTTT
CAGCAGCGCGTTGTTTTTTGTTTGCAGCGCGGGATGTCTGGTTTGTGGTCGGCTTGCCAGTTTTTCTGAGTGAAGTGCTT
GGCTGGTCGTTTTGGCAGGCTGGCGGCTATTTGGCCTTATGGGTGATTGGCTATGGCCTGATTCAAGCGCTTGCGCCAGC
GATTACCCGCCGCTGGCAAGCCACGCCCAACGGCTGGGCTGCAACAATTTTGGCTGGCTTGTTGATGCTGATTATGGCTG
CGATTGCCAGTGTTGTGCAAATCAACCAACAATCGGCTATCGTGGTTGTGGTCGGCTTAATTGGCTTTGGATTTATTTTT
GCGCTGAATTCGGCAGTCCACTCCTACCTGATTTTAGCCTACACTGACCAAGCCGATGTGGCTTTGAATGTAGGTTTTTA
CTATATGGCCAACGCCTTGGGCCGCCTGCTTGGCACAATTCTTTCGGGTCTGCTGTATCAAAGCTATGGGTTGGCAGGCT
GTTTATGGGCAGCGGCCTTACTGAGCGCAATCACAGCCGTGATCTCGTTGAGCTTGCCGCGTGTGCCAAACCAACCGCTG
TTGGGCGAACAGCAGGCCAAAGCTAGCTCGATCTGA

Upstream 100 bases:

>100_bases
GAAAATTATGGCTTGGTACGACAACGAAATTGGCTATGTGAATCGAATGTTGGAGCTAGCCGCTAAGGTCGCCCAACTTC
AGGCGGGCTAGGAGCCGACT

Downstream 100 bases:

>100_bases
GCAGAATGGAACCAAATTGCTACTTGTAAGTTGGCCTGAATCTACTACAATAGAGCTAAGCAAGCGATCGTGGTAGATAC
CACGTGGCATTTCGGAGGAA

Product: major facilitator transporter

Products: NA

Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit

Number of amino acids: Translated: 411; Mature: 411

Protein sequence:

>411_residues
MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLFGGWLGARFGLNRTLHAGLVL
QVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKSSIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLL
STIGFRSAFAVLASLIAVAAIGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL
GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQINQQSAIVVVVGLIGFGFIF
ALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTILSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPL
LGEQQAKASSI

Sequences:

>Translated_411_residues
MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLFGGWLGARFGLNRTLHAGLVL
QVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKSSIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLL
STIGFRSAFAVLASLIAVAAIGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL
GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQINQQSAIVVVVGLIGFGFIF
ALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTILSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPL
LGEQQAKASSI
>Mature_411_residues
MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLFGGWLGARFGLNRTLHAGLVL
QVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKSSIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLL
STIGFRSAFAVLASLIAVAAIGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL
GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQINQQSAIVVVVGLIGFGFIF
ALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTILSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPL
LGEQQAKASSI

Specific function: Unknown

COG id: COG0477

COG function: function code GEPR; Permeases of the major facilitator superfamily

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 44140; Mature: 44140

Theoretical pI: Translated: 10.21; Mature: 10.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure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HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA