Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899849
Identifier: 159899849
GI number: 159899849
Start: 4200736
End: 4201971
Strand: Direct
Name: 159899849
Synonym: Haur_3332
Alternate gene names: NA
Gene position: 4200736-4201971 (Clockwise)
Preceding gene: 159899848
Following gene: 159899850
Centisome position: 66.19
GC content: 51.05
Gene sequence:
>1236_bases ATGCAGCAACAATTCAAAGAGTATGCGATTGTTACCGCCGCTTATTGGGCCTTTACATTGACCGATGGCGCGTTGCGTAT GTTGGTCTTGTTTCATTTTCATCAACTTGGCTATAGTGCCTTGGCGGTGGCGGCGCTCTTTATTTTCTATGAAGTATTTG GGGTGATTACCAATTTGTTTGGTGGCTGGCTGGGCGCACGCTTTGGCCTGAATCGCACCTTACATGCTGGCTTGGTGTTA CAAGTTATCGCTTTGGGCATGATGGTTGTGCCCAGTGCTTGGCTCAGCGTGACATATGTGATGCTAGCGCAAGCTGGCTC GGGCATCGCCAAAGATCTGACCAAAATGAGTGCCAAGAGCAGCATCAAAATGTTGGTGGCTGAAGATGCTCAATCAACTT TGTTCAAATGGGTAGCTATTTTGACTGGCTCGAAAAATGCGCTCAAAGGTGTGGGCTTTTTCTTGGGCAGCCTATTGCTG AGCACCATTGGCTTTCGCAGTGCCTTCGCTGTGCTTGCGAGTTTGATTGCCGTAGCTGCCATTGGCACATTCAGCTTTTT GCAACACGATTTGGGGCGTAGCAAAGCCAAGCCGAAGTGGCAACAACTATTTGCCAAAAGCCGCGCGATCAATCTGCTTT CAGCAGCGCGTTGTTTTTTGTTTGCAGCGCGGGATGTCTGGTTTGTGGTCGGCTTGCCAGTTTTTCTGAGTGAAGTGCTT GGCTGGTCGTTTTGGCAGGCTGGCGGCTATTTGGCCTTATGGGTGATTGGCTATGGCCTGATTCAAGCGCTTGCGCCAGC GATTACCCGCCGCTGGCAAGCCACGCCCAACGGCTGGGCTGCAACAATTTTGGCTGGCTTGTTGATGCTGATTATGGCTG CGATTGCCAGTGTTGTGCAAATCAACCAACAATCGGCTATCGTGGTTGTGGTCGGCTTAATTGGCTTTGGATTTATTTTT GCGCTGAATTCGGCAGTCCACTCCTACCTGATTTTAGCCTACACTGACCAAGCCGATGTGGCTTTGAATGTAGGTTTTTA CTATATGGCCAACGCCTTGGGCCGCCTGCTTGGCACAATTCTTTCGGGTCTGCTGTATCAAAGCTATGGGTTGGCAGGCT GTTTATGGGCAGCGGCCTTACTGAGCGCAATCACAGCCGTGATCTCGTTGAGCTTGCCGCGTGTGCCAAACCAACCGCTG TTGGGCGAACAGCAGGCCAAAGCTAGCTCGATCTGA
Upstream 100 bases:
>100_bases GAAAATTATGGCTTGGTACGACAACGAAATTGGCTATGTGAATCGAATGTTGGAGCTAGCCGCTAAGGTCGCCCAACTTC AGGCGGGCTAGGAGCCGACT
Downstream 100 bases:
>100_bases GCAGAATGGAACCAAATTGCTACTTGTAAGTTGGCCTGAATCTACTACAATAGAGCTAAGCAAGCGATCGTGGTAGATAC CACGTGGCATTTCGGAGGAA
Product: major facilitator transporter
Products: NA
Alternate protein names: Facilitator Superfamily Protein; Facilitator Superfamily Permease; Facilitator Superfamily Multidrug-Efflux Transporter; Membrane Transporter; Facilitator Superfamily Transporter; Multidrug Efflux Transporter MFS Family; Multidrug-Efflux Transporter; Nonfunctional Facilitator Superfamily Protein; MFS Transporter; Transporter-Like Protein; Permease Of Facilitator Superfamily; Nitric Oxide Reductase Cytochrome B Subunit
Number of amino acids: Translated: 411; Mature: 411
Protein sequence:
>411_residues MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLFGGWLGARFGLNRTLHAGLVL QVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKSSIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLL STIGFRSAFAVLASLIAVAAIGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQINQQSAIVVVVGLIGFGFIF ALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTILSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPL LGEQQAKASSI
Sequences:
>Translated_411_residues MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLFGGWLGARFGLNRTLHAGLVL QVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKSSIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLL STIGFRSAFAVLASLIAVAAIGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQINQQSAIVVVVGLIGFGFIF ALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTILSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPL LGEQQAKASSI >Mature_411_residues MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLFGGWLGARFGLNRTLHAGLVL QVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKSSIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLL STIGFRSAFAVLASLIAVAAIGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQINQQSAIVVVVGLIGFGFIF ALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTILSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPL LGEQQAKASSI
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 44140; Mature: 44140
Theoretical pI: Translated: 10.21; Mature: 10.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGWLGARFGLNRTLHAGLVLQVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLLSTIGFRSAFAVLASLIAVAA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQ CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH INQQSAIVVVVGLIGFGFIFALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTI HCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHH LSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPLLGEQQAKASSI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC >Mature Secondary Structure MQQQFKEYAIVTAAYWAFTLTDGALRMLVLFHFHQLGYSALAVAALFIFYEVFGVITNLF CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GGWLGARFGLNRTLHAGLVLQVIALGMMVVPSAWLSVTYVMLAQAGSGIAKDLTKMSAKS HHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH SIKMLVAEDAQSTLFKWVAILTGSKNALKGVGFFLGSLLLSTIGFRSAFAVLASLIAVAA HHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH IGTFSFLQHDLGRSKAKPKWQQLFAKSRAINLLSAARCFLFAARDVWFVVGLPVFLSEVL HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH GWSFWQAGGYLALWVIGYGLIQALAPAITRRWQATPNGWAATILAGLLMLIMAAIASVVQ CCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHH INQQSAIVVVVGLIGFGFIFALNSAVHSYLILAYTDQADVALNVGFYYMANALGRLLGTI HCCCCHHHHHHHHHHHHHHHHHHHHHHHEEEEEEECCCCEEEEHHHHHHHHHHHHHHHHH LSGLLYQSYGLAGCLWAAALLSAITAVISLSLPRVPNQPLLGEQQAKASSI HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA