Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
---|---|
Accession | NC_009972 |
Length | 6,346,587 |
Click here to switch to the map view.
The map label for this gene is 159899714
Identifier: 159899714
GI number: 159899714
Start: 4041350
End: 4043323
Strand: Reverse
Name: 159899714
Synonym: Haur_3196
Alternate gene names: NA
Gene position: 4043323-4041350 (Counterclockwise)
Preceding gene: 159899715
Following gene: 159899713
Centisome position: 63.71
GC content: 52.33
Gene sequence:
>1974_bases ATGGTACTATGGCACAGTCTGGACAACAGGCTGTGTCATTGTTTTAGCTCGCTTTTTGGAAGCCACATGCAGCAACATTC TCGATTAAAGCTTGGTTTGGCGTGGCTGGGCTTAATTGGGCTTTATAGCCTGACGCTCACCCAAATTCATACCTTCGATG CCTACTCCTACGCGACGGCAGTGCAAGCCAAGCCATGGCGCGAATCGTTTCATCCTCATCATTTATTCTATGGGCCGCTT GGTGAGATTATCTATTGGCTCAGTCAAGGTTTGGGTTATCAAGGTATGGCATTTGGGCCATTGCAAATGCTGAATGTAGT GGCTGGAGCCAGCGGCGTGATCATTTGGTGGCGTTTGCTTCAGCGTTTGACCAACCAGCCTTGGCTGGCAACCAGCGGCA GTGTGTTGGTTGGCGGAGCCTACGCTTGGTGGTATTACGCAGTTGAGGTCGAGGTTTATACCTTGGCGAGCTTGTTTTTA ATTATTGCCACTGGCTTGTTGATTCGGCTGGCTGAAACGCCCCAAATACTGAGCAATTGGCGCTGGCTTGGGCTAGCCCA TAGTGCGGCAATCCTGTTTCATCAAACGAATGTGCTTTGGCTTGTGCCTGTGCTGGTGGTTTGGCTGAGCGCTGCGTGGG GCACTACCGCATGGCAACAACGCTGGCACGCATTTTTGCAGTATGCCATGGTTGGGTTGCTGGTGGTTGGTGGTAGCTAT GCCATCGTGATGTTTGGCTTGAGTGGCTTCCGCACATGGCCGCAAGTGCAACAGTGGCTGTTTGAATATGCCAATACTGG TTTGTGGGGCACGACCAATGCCAACACCTTTGCCAATTTGCTCAACGGCTGGCAACATACGATCCATGGTTGGTTAGGTG GTGCGGTTTTGCTGGCCAGCCTTGGCCTGATCGCTTGGCGCTGGCGTTTGATGTGGCGGCAATCACGAATGTTAGTGGTG TTGGCCGCGAGCTGGCTCATCACCTATAGCCTCTTTTTTGGCTGGTGGGAGCCAGATAATATTGAATTTTGGATTGCTTG CTTGCCGCCGTGGGCTTTATTGATCACGCTTAGTTTGCATACGCTCAAGCTGCCGCAGCGCCGTTGGTGGCAGCCTGCCC TAAGTTTAGCCTTGGTTGGCATGAGCCTTAGCAATGGCTGGCAAATTTATGCCAATGGCGCTGCGGCCAACGATCAAGAT CGCCAAATCATCACTGAATTGGCCAAAACTGGCAGGCCCAACGATTTTTATTTTGTGCCGAATGGTTTGCAAGCCTTGTA TGCCGAATATGAATTTGAGCGCCCAAACAGCCTGCCACTTAGCGTTAGCCCTGGCGATTGGCAGCATGGTTGCTTGGAAA TTAGCGCTAGAATCGTCGATACTACCAGCGCTGGCTATACGGTTTGGCTTGATCAGCAGGCAGTCGAGCCTAGCCCAATT TTGCTCGAACGTTACGGACTAGAGCAATCAGCGGTTACCGCATGCTTTGCCCCATTTTTAGCCCAAGCCCAGCCAATTAC CCTGACCCATGCACGTTATCTCAAGCTCGACCCGATTCCTCAAGGCTTGCCCGATTGGCACTGGCAGAATTGGAGTTTGG GCTGGCGCGAGAATTTTATTACTGCTAGCACTTGGGGCGCTGGCTGGACATTTATCCCACAGCAAGACCCACATTTGCTT AGCCCACGGATTAATCTGGCGAGCAGCCAATGGCGCAAACTTGAAATTACTATGGCCAGCACCCTGCCAAATCAACATGG CCAACTGTATTGGATGGCTCCTGGCGAGGGTGCAACCGAAGATCATTCGGTCTCATGGGATGTGATTGGTGATGGAGCGC TGCATACCTACACCCTTGATCTTAGCCAAATCCCAACTTGGCAAGGCTCAATTGGCATGCTGCGGCTTGATCCGGTTGTG GCGGGTGCTGAGCAGCAAACCGTCACGATTCAGCGCCTACGCCTGCTGCCCTAA
Upstream 100 bases:
>100_bases TTGTAGCTTGCATGGCAGTATGCAAGGTACGGTTGTGGTAACTCCACCAATGCAAAATACCTATCTGCCGTGGACAACTA AATAACCTATCGCCTATTCA
Downstream 100 bases:
>100_bases GTTACTTAGCGAGTATGTTAAAATAGCCCTAACTTTTTTGGATGCTATGGTGAGGAACCAGCGATGATCACCGCATTTGT GCATATTCAAACTGAACCAA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 657; Mature: 657
Protein sequence:
>657_residues MVLWHSLDNRLCHCFSSLFGSHMQQHSRLKLGLAWLGLIGLYSLTLTQIHTFDAYSYATAVQAKPWRESFHPHHLFYGPL GEIIYWLSQGLGYQGMAFGPLQMLNVVAGASGVIIWWRLLQRLTNQPWLATSGSVLVGGAYAWWYYAVEVEVYTLASLFL IIATGLLIRLAETPQILSNWRWLGLAHSAAILFHQTNVLWLVPVLVVWLSAAWGTTAWQQRWHAFLQYAMVGLLVVGGSY AIVMFGLSGFRTWPQVQQWLFEYANTGLWGTTNANTFANLLNGWQHTIHGWLGGAVLLASLGLIAWRWRLMWRQSRMLVV LAASWLITYSLFFGWWEPDNIEFWIACLPPWALLITLSLHTLKLPQRRWWQPALSLALVGMSLSNGWQIYANGAAANDQD RQIITELAKTGRPNDFYFVPNGLQALYAEYEFERPNSLPLSVSPGDWQHGCLEISARIVDTTSAGYTVWLDQQAVEPSPI LLERYGLEQSAVTACFAPFLAQAQPITLTHARYLKLDPIPQGLPDWHWQNWSLGWRENFITASTWGAGWTFIPQQDPHLL SPRINLASSQWRKLEITMASTLPNQHGQLYWMAPGEGATEDHSVSWDVIGDGALHTYTLDLSQIPTWQGSIGMLRLDPVV AGAEQQTVTIQRLRLLP
Sequences:
>Translated_657_residues MVLWHSLDNRLCHCFSSLFGSHMQQHSRLKLGLAWLGLIGLYSLTLTQIHTFDAYSYATAVQAKPWRESFHPHHLFYGPL GEIIYWLSQGLGYQGMAFGPLQMLNVVAGASGVIIWWRLLQRLTNQPWLATSGSVLVGGAYAWWYYAVEVEVYTLASLFL IIATGLLIRLAETPQILSNWRWLGLAHSAAILFHQTNVLWLVPVLVVWLSAAWGTTAWQQRWHAFLQYAMVGLLVVGGSY AIVMFGLSGFRTWPQVQQWLFEYANTGLWGTTNANTFANLLNGWQHTIHGWLGGAVLLASLGLIAWRWRLMWRQSRMLVV LAASWLITYSLFFGWWEPDNIEFWIACLPPWALLITLSLHTLKLPQRRWWQPALSLALVGMSLSNGWQIYANGAAANDQD RQIITELAKTGRPNDFYFVPNGLQALYAEYEFERPNSLPLSVSPGDWQHGCLEISARIVDTTSAGYTVWLDQQAVEPSPI LLERYGLEQSAVTACFAPFLAQAQPITLTHARYLKLDPIPQGLPDWHWQNWSLGWRENFITASTWGAGWTFIPQQDPHLL SPRINLASSQWRKLEITMASTLPNQHGQLYWMAPGEGATEDHSVSWDVIGDGALHTYTLDLSQIPTWQGSIGMLRLDPVV AGAEQQTVTIQRLRLLP >Mature_657_residues MVLWHSLDNRLCHCFSSLFGSHMQQHSRLKLGLAWLGLIGLYSLTLTQIHTFDAYSYATAVQAKPWRESFHPHHLFYGPL GEIIYWLSQGLGYQGMAFGPLQMLNVVAGASGVIIWWRLLQRLTNQPWLATSGSVLVGGAYAWWYYAVEVEVYTLASLFL IIATGLLIRLAETPQILSNWRWLGLAHSAAILFHQTNVLWLVPVLVVWLSAAWGTTAWQQRWHAFLQYAMVGLLVVGGSY AIVMFGLSGFRTWPQVQQWLFEYANTGLWGTTNANTFANLLNGWQHTIHGWLGGAVLLASLGLIAWRWRLMWRQSRMLVV LAASWLITYSLFFGWWEPDNIEFWIACLPPWALLITLSLHTLKLPQRRWWQPALSLALVGMSLSNGWQIYANGAAANDQD RQIITELAKTGRPNDFYFVPNGLQALYAEYEFERPNSLPLSVSPGDWQHGCLEISARIVDTTSAGYTVWLDQQAVEPSPI LLERYGLEQSAVTACFAPFLAQAQPITLTHARYLKLDPIPQGLPDWHWQNWSLGWRENFITASTWGAGWTFIPQQDPHLL SPRINLASSQWRKLEITMASTLPNQHGQLYWMAPGEGATEDHSVSWDVIGDGALHTYTLDLSQIPTWQGSIGMLRLDPVV AGAEQQTVTIQRLRLLP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 74356; Mature: 74356
Theoretical pI: Translated: 6.99; Mature: 6.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLWHSLDNRLCHCFSSLFGSHMQQHSRLKLGLAWLGLIGLYSLTLTQIHTFDAYSYATA CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHC VQAKPWRESFHPHHLFYGPLGEIIYWLSQGLGYQGMAFGPLQMLNVVAGASGVIIWWRLL CCCCCHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCHHHHHHHHH QRLTNQPWLATSGSVLVGGAYAWWYYAVEVEVYTLASLFLIIATGLLIRLAETPQILSNW HHHCCCCCEECCCCEEECCEEEEEEEEEEEEHHHHHHHHHHHHHHHHEEECCCHHHHHCC RWLGLAHSAAILFHQTNVLWLVPVLVVWLSAAWGTTAWQQRWHAFLQYAMVGLLVVGGSY EEEEEHHHEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE AIVMFGLSGFRTWPQVQQWLFEYANTGLWGTTNANTFANLLNGWQHTIHGWLGGAVLLAS EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLIAWRWRLMWRQSRMLVVLAASWLITYSLFFGWWEPDNIEFWIACLPPWALLITLSLH HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHH TLKLPQRRWWQPALSLALVGMSLSNGWQIYANGAAANDQDRQIITELAKTGRPNDFYFVP HHCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECC NGLQALYAEYEFERPNSLPLSVSPGDWQHGCLEISARIVDTTSAGYTVWLDQQAVEPSPI CHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCC LLERYGLEQSAVTACFAPFLAQAQPITLTHARYLKLDPIPQGLPDWHWQNWSLGWRENFI HHHHCCCCHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCEE TASTWGAGWTFIPQQDPHLLSPRINLASSQWRKLEITMASTLPNQHGQLYWMAPGEGATE EEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCC DHSVSWDVIGDGALHTYTLDLSQIPTWQGSIGMLRLDPVVAGAEQQTVTIQRLRLLP CCCEEEEEEECCCEEEEEEEHHHCCCCCCCCCEEEECCEECCCCCCEEEEHHHCCCC >Mature Secondary Structure MVLWHSLDNRLCHCFSSLFGSHMQQHSRLKLGLAWLGLIGLYSLTLTQIHTFDAYSYATA CEEEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCHHHHHC VQAKPWRESFHPHHLFYGPLGEIIYWLSQGLGYQGMAFGPLQMLNVVAGASGVIIWWRLL CCCCCHHHCCCCCEEEECCHHHHHHHHHHCCCCCCCEECHHHHHHHHCCCCHHHHHHHHH QRLTNQPWLATSGSVLVGGAYAWWYYAVEVEVYTLASLFLIIATGLLIRLAETPQILSNW HHHCCCCCEECCCCEEECCEEEEEEEEEEEEHHHHHHHHHHHHHHHHEEECCCHHHHHCC RWLGLAHSAAILFHQTNVLWLVPVLVVWLSAAWGTTAWQQRWHAFLQYAMVGLLVVGGSY EEEEEHHHEEEEEEECCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCE AIVMFGLSGFRTWPQVQQWLFEYANTGLWGTTNANTFANLLNGWQHTIHGWLGGAVLLAS EEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH LGLIAWRWRLMWRQSRMLVVLAASWLITYSLFFGWWEPDNIEFWIACLPPWALLITLSLH HHHHHHHHHHHHHCCCEEEEHHHHHHHHHHHHHCCCCCCCCEEEEEECCHHHHHHHHHHH TLKLPQRRWWQPALSLALVGMSLSNGWQIYANGAAANDQDRQIITELAKTGRPNDFYFVP HHCCCHHHHHHHHHHHHHHEEECCCCEEEEECCCCCCCHHHHHHHHHHHCCCCCCEEECC NGLQALYAEYEFERPNSLPLSVSPGDWQHGCLEISARIVDTTSAGYTVWLDQQAVEPSPI CHHHHHHHHHCCCCCCCCEEEECCCCCCCCCEEEEEEEEEECCCCEEEEEECCCCCCCCC LLERYGLEQSAVTACFAPFLAQAQPITLTHARYLKLDPIPQGLPDWHWQNWSLGWRENFI HHHHCCCCHHHHHHHHHHHHHCCCCEEEECEEEEEECCCCCCCCCCCCCCCCCCCCCCEE TASTWGAGWTFIPQQDPHLLSPRINLASSQWRKLEITMASTLPNQHGQLYWMAPGEGATE EEECCCCCEEECCCCCCCCCCCCCCCCCCCCEEEEEEEEECCCCCCCEEEEECCCCCCCC DHSVSWDVIGDGALHTYTLDLSQIPTWQGSIGMLRLDPVVAGAEQQTVTIQRLRLLP CCCEEEEEEECCCEEEEEEEHHHCCCCCCCCCEEEECCEECCCCCCEEEEHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA