Click here to switch to the map view.

The map label for this gene is 159899702

Identifier: 159899702

GI number: 159899702

Start: 4028070

End: 4028855

Strand: Reverse

Name: 159899702

Synonym: Haur_3184

Alternate gene names: NA

Gene position: 4028855-4028070 (Counterclockwise)

Preceding gene: 159899705

Following gene: 159899699

Centisome position: 63.48

GC content: 53.69

Gene sequence:

>786_bases
GTGCTTGATCTTGAACAAACTGAAGATGTAGGAACGTTGCTGAGTGCTGGACGCGAGGCAGCGCAACGTGGCGATAAAAC
GACGGCGCGTAACGCTTTGCGCAAAGCCAATCGGCTTGCCCCCAACGATGTACCGGTGTTAATCGCGTTGGCTGAGGTAG
TTGGGACATTTAACGAGCGACGGTTGTTGCTTGAGCAGGCGCTGCAATTAGAGCCAGATAATATTGCCGCCCAAGGAGCG
TTGGCGGCGCTCAAAAGTGGCGCGGCTAATCCACACCCAGCGGTTAATCTGCCGCCAATTGACCCAACCCCATTGATGGC
TCCCACCAGCGAAACGCTCTATTGCTATCGCCACCCAACGGTCGAAACCGGCTTACGCTGTATTCAATGTGCGCGGCCAA
TCTGCTCGAAATGCAGCGAACGCACGCCAGTCGGCTTTATTTGCCCTGAATGTCGTAAAGAACGCCGATCACCAATGTAC
CAAGTTGAGCCGCTTGATGCGGTCAAGGCTGGGGCGATTAGCCTCGTGCTTGGTGGGGTTGGTGCTTATTTGCTTAGCCC
ATTTGGCATATTTCTCTTTTTTCTTATGGGCGGTGTGATTGGCGAAATGATTATGCGAGCGATCGATTGGGCTACCCGTA
AACGCGGCCTGATCATGCAGATTGCGGCGGCTGGCTCGTTTGCTGTCGGGGCGATTCTGGCGGCAGTGTTTGCTGTTGGC
TTTAAGATCGGGCTAATTCTCTTTCTAGGCTTTGGTGTCTTTATCATTGTGGCACGTTTGCGCTAG

Upstream 100 bases:

>100_bases
CCAAAAAACGGTATGATTAACGCTAATAAGCGCATTCTAAGCCATGCTACGCGGATCATCGTGCGCTGGATGGTTGTAGA
GGCCATGAAAGGGGAATTTT

Downstream 100 bases:

>100_bases
GGAAACCATTTCTGATTGAGTTTGGCGATCCAGCCCTCGGCATGCAGTTGACCAAGCTCACGATTAATTTGGTTCTGCAA
TTCGTAGGCGGTGATTGGCA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MLDLEQTEDVGTLLSAGREAAQRGDKTTARNALRKANRLAPNDVPVLIALAEVVGTFNERRLLLEQALQLEPDNIAAQGA
LAALKSGAANPHPAVNLPPIDPTPLMAPTSETLYCYRHPTVETGLRCIQCARPICSKCSERTPVGFICPECRKERRSPMY
QVEPLDAVKAGAISLVLGGVGAYLLSPFGIFLFFLMGGVIGEMIMRAIDWATRKRGLIMQIAAAGSFAVGAILAAVFAVG
FKIGLILFLGFGVFIIVARLR

Sequences:

>Translated_261_residues
MLDLEQTEDVGTLLSAGREAAQRGDKTTARNALRKANRLAPNDVPVLIALAEVVGTFNERRLLLEQALQLEPDNIAAQGA
LAALKSGAANPHPAVNLPPIDPTPLMAPTSETLYCYRHPTVETGLRCIQCARPICSKCSERTPVGFICPECRKERRSPMY
QVEPLDAVKAGAISLVLGGVGAYLLSPFGIFLFFLMGGVIGEMIMRAIDWATRKRGLIMQIAAAGSFAVGAILAAVFAVG
FKIGLILFLGFGVFIIVARLR
>Mature_261_residues
MLDLEQTEDVGTLLSAGREAAQRGDKTTARNALRKANRLAPNDVPVLIALAEVVGTFNERRLLLEQALQLEPDNIAAQGA
LAALKSGAANPHPAVNLPPIDPTPLMAPTSETLYCYRHPTVETGLRCIQCARPICSKCSERTPVGFICPECRKERRSPMY
QVEPLDAVKAGAISLVLGGVGAYLLSPFGIFLFFLMGGVIGEMIMRAIDWATRKRGLIMQIAAAGSFAVGAILAAVFAVG
FKIGLILFLGFGVFIIVARLR

Specific function: Unknown

COG id: COG0705

COG function: function code R; Uncharacterized membrane protein (homolog of Drosophila rhomboid)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27973; Mature: 27973

Theoretical pI: Translated: 8.69; Mature: 8.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLDLEQTEDVGTLLSAGREAAQRGDKTTARNALRKANRLAPNDVPVLIALAEVVGTFNER
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
RLLLEQALQLEPDNIAAQGALAALKSGAANPHPAVNLPPIDPTPLMAPTSETLYCYRHPT
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
VETGLRCIQCARPICSKCSERTPVGFICPECRKERRSPMYQVEPLDAVKAGAISLVLGGV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
GAYLLSPFGIFLFFLMGGVIGEMIMRAIDWATRKRGLIMQIAAAGSFAVGAILAAVFAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
FKIGLILFLGFGVFIIVARLR
HHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MLDLEQTEDVGTLLSAGREAAQRGDKTTARNALRKANRLAPNDVPVLIALAEVVGTFNER
CCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCHHHH
RLLLEQALQLEPDNIAAQGALAALKSGAANPHPAVNLPPIDPTPLMAPTSETLYCYRHPT
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCC
VETGLRCIQCARPICSKCSERTPVGFICPECRKERRSPMYQVEPLDAVKAGAISLVLGGV
HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCEEECCHHHHHHHHHHHHHHHH
GAYLLSPFGIFLFFLMGGVIGEMIMRAIDWATRKRGLIMQIAAAGSFAVGAILAAVFAVG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHH
FKIGLILFLGFGVFIIVARLR
HHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA