Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is sps1 [H]
Identifier: 159899691
GI number: 159899691
Start: 4010311
End: 4012095
Strand: Reverse
Name: sps1 [H]
Synonym: Haur_3173
Alternate gene names: 159899691
Gene position: 4012095-4010311 (Counterclockwise)
Preceding gene: 159899692
Following gene: 159899690
Centisome position: 63.22
GC content: 53.28
Gene sequence:
>1785_bases ATGACGCAACCTTCTGCTCCTTCAACACCATTACTGCATAACCGTTATCGGGTGCAAGCTCGTTTGGGCGAAAATCGCTT AGCATTGGTGTTTCGGGCAACCGACGAACGGCTGAATCGTTCAGTTTTAGTCCATCTGCTACGCCCTGACTTGTTAGAGA ATGCCCAATTACGCAAGCGTTTTAATGATGAGGCTCAAGGCCTTGCCAAACGCACCCATCCGGGCTTGCTCGATGTCTAT GATAATGGCGAGGTCGGCAATCGCCCATATATGATCACCGAGGATGTCGATGGCGATTTATTGCGCGATCGGCTGCCATT AGCGGCAGAACGAGCCTTGGAAGTGTTACGCCAAGTGGTTGGGGCGGTGGCGATTACGATTAACACCCAAACTCCCACTC CGCCAATTGGCTCGCGCTCGATTTTGCTCACGAGCAGCGATCGGGCGGTGCTAATAGAGCCGTGGTGGCTGAATAACGAA GAATTACGTGGCGATATGCAACTGTATCGTGCGCCAGAACGGCTCAAAGGTGCTGCGCCCGATGAGCGTTCGATCGTGTA TAGCCTTGGCTTATTGGGCTACGAATTGCTAACAGGTATCACGCCCGACCCTAATGCCAAAGACATGCCTTCGATCTATC AACAAGTTAATGGCTTTGTGCCCTCGTTAGTGGCAGCGCTCCAAGTCGCAACAGCGGCTGACCCCGATCAACGCACGGCC ACGGTTGCGGCCTTGGCTCGCGATTTGGCGGCGGTTGATTCGGCAGCTGATGCGCCGACCAAACAATTGGTGCGGCCATT GCCAGCTTTGCGCGATACCATGCGCGATATGCGCCAAAATTTGGCTCAACGTCGAACCCAGCCAACACCTACGCCGCCAC CACAGCAATCGCCTTCGGCGAGTGCAGCGCCTAACTGGAATGTTGCGCCGCCTAAGCCGATGATGCCACCGCGCCAAGCA CCGCCGCCAATCCAGCAACAAGCAGTGCAACAGCCACCACCGCAATATTATGCGCCACAGCCTGCACCGCCAGTGCAACA AGGCATTAGCCGCGAAGAATTACGTAGCGAGTTGCGCAGCGAAATTCGGCGTGAAACCTATCGCCGTGGTTGCTTGAATT TTATTTGGCGACGGGCCTTTGGTCTTACATTAATTACCTTATTGGTGATTGGCTGTGTTTGGGGCTTTACCTTTGGGCGC AATTGGCTGGTTGGCGGAGCGGCCAAAACGTGGGCTTGCGAGCGGATTCCAACCTGGGCCTGCAATTTGCTACCTGGGCA ACAGAGCGAAACCTATATCATCATCCAAGATAATACGCCAGTGTATACCAACCAAGATCGCAACAGCGCCTTGGTGGTGA GCTTGCCGCGTAACACTGAAGTCGTGATTCGCGATCCCGCGACCAACTTAACCAGTAATGGTTGGGCCAAAATTGAAATC GACGATTACCAAGGTCGGCGGATTACGGGCTGGATTGATAGTTTGAATATTGCCAAGCCCCAGCCAACCGTTCAGCCAAA TGAGCCAGATCTCCCGACAACCGTTGGTGAATTGGTGTTCAAAACCTTGCAAGAAAGCAATGTCCGTACAACTGCCGAAT ACAAGAGCGATGGCAGCAACATTATTATGGCAATTCCGGCCAATACTCGTGTGATTGCGCCCGACCCCGATGCGATTGTG ACCCAAGGCGGAATTGTCTGGATCAATATTGTCTTTGAAAAAGATGGTCAAGCGATGACCGGCTGGATTTCGCGTGATCT TTTGCAGCAGGAGGAAACCCCTTGA
Upstream 100 bases:
>100_bases GCCTTGGCAAGCTGATGCTTATGAGTTAGTTATTGCGGTCAAACCGTAGCCCTTGGCGTAGTGTCGAGATCTGCTCGGCG TTGCAAGGTGAATGTAATTT
Downstream 100 bases:
>100_bases GCGTGTTCGATTTGCCAGACGTTTTGTTGCAACGCTTACGCAATGCCCAATCAATTACAGTGCTGACAGGTGGGGGTTTG GCTCAAGAGTGTGGGATTCC
Product: serine/threonine protein kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 594; Mature: 593
Protein sequence:
>594_residues MTQPSAPSTPLLHNRYRVQARLGENRLALVFRATDERLNRSVLVHLLRPDLLENAQLRKRFNDEAQGLAKRTHPGLLDVY DNGEVGNRPYMITEDVDGDLLRDRLPLAAERALEVLRQVVGAVAITINTQTPTPPIGSRSILLTSSDRAVLIEPWWLNNE ELRGDMQLYRAPERLKGAAPDERSIVYSLGLLGYELLTGITPDPNAKDMPSIYQQVNGFVPSLVAALQVATAADPDQRTA TVAALARDLAAVDSAADAPTKQLVRPLPALRDTMRDMRQNLAQRRTQPTPTPPPQQSPSASAAPNWNVAPPKPMMPPRQA PPPIQQQAVQQPPPQYYAPQPAPPVQQGISREELRSELRSEIRRETYRRGCLNFIWRRAFGLTLITLLVIGCVWGFTFGR NWLVGGAAKTWACERIPTWACNLLPGQQSETYIIIQDNTPVYTNQDRNSALVVSLPRNTEVVIRDPATNLTSNGWAKIEI DDYQGRRITGWIDSLNIAKPQPTVQPNEPDLPTTVGELVFKTLQESNVRTTAEYKSDGSNIIMAIPANTRVIAPDPDAIV TQGGIVWINIVFEKDGQAMTGWISRDLLQQEETP
Sequences:
>Translated_594_residues MTQPSAPSTPLLHNRYRVQARLGENRLALVFRATDERLNRSVLVHLLRPDLLENAQLRKRFNDEAQGLAKRTHPGLLDVY DNGEVGNRPYMITEDVDGDLLRDRLPLAAERALEVLRQVVGAVAITINTQTPTPPIGSRSILLTSSDRAVLIEPWWLNNE ELRGDMQLYRAPERLKGAAPDERSIVYSLGLLGYELLTGITPDPNAKDMPSIYQQVNGFVPSLVAALQVATAADPDQRTA TVAALARDLAAVDSAADAPTKQLVRPLPALRDTMRDMRQNLAQRRTQPTPTPPPQQSPSASAAPNWNVAPPKPMMPPRQA PPPIQQQAVQQPPPQYYAPQPAPPVQQGISREELRSELRSEIRRETYRRGCLNFIWRRAFGLTLITLLVIGCVWGFTFGR NWLVGGAAKTWACERIPTWACNLLPGQQSETYIIIQDNTPVYTNQDRNSALVVSLPRNTEVVIRDPATNLTSNGWAKIEI DDYQGRRITGWIDSLNIAKPQPTVQPNEPDLPTTVGELVFKTLQESNVRTTAEYKSDGSNIIMAIPANTRVIAPDPDAIV TQGGIVWINIVFEKDGQAMTGWISRDLLQQEETP >Mature_593_residues TQPSAPSTPLLHNRYRVQARLGENRLALVFRATDERLNRSVLVHLLRPDLLENAQLRKRFNDEAQGLAKRTHPGLLDVYD NGEVGNRPYMITEDVDGDLLRDRLPLAAERALEVLRQVVGAVAITINTQTPTPPIGSRSILLTSSDRAVLIEPWWLNNEE LRGDMQLYRAPERLKGAAPDERSIVYSLGLLGYELLTGITPDPNAKDMPSIYQQVNGFVPSLVAALQVATAADPDQRTAT VAALARDLAAVDSAADAPTKQLVRPLPALRDTMRDMRQNLAQRRTQPTPTPPPQQSPSASAAPNWNVAPPKPMMPPRQAP PPIQQQAVQQPPPQYYAPQPAPPVQQGISREELRSELRSEIRRETYRRGCLNFIWRRAFGLTLITLLVIGCVWGFTFGRN WLVGGAAKTWACERIPTWACNLLPGQQSETYIIIQDNTPVYTNQDRNSALVVSLPRNTEVVIRDPATNLTSNGWAKIEID DYQGRRITGWIDSLNIAKPQPTVQPNEPDLPTTVGELVFKTLQESNVRTTAEYKSDGSNIIMAIPANTRVIAPDPDAIVT QGGIVWINIVFEKDGQAMTGWISRDLLQQEETP
Specific function: Unknown
COG id: COG0515
COG function: function code RTKL; Serine/threonine protein kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Contains 1 protein kinase domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011009 - InterPro: IPR005543 - InterPro: IPR000719 - InterPro: IPR017441 - InterPro: IPR017442 - InterPro: IPR008271 - InterPro: IPR002290 [H]
Pfam domain/function: PF03793 PASTA; PF00069 Pkinase [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 65981; Mature: 65850
Theoretical pI: Translated: 6.80; Mature: 6.80
Prosite motif: PS50011 PROTEIN_KINASE_DOM
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTQPSAPSTPLLHNRYRVQARLGENRLALVFRATDERLNRSVLVHLLRPDLLENAQLRKR CCCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH FNDEAQGLAKRTHPGLLDVYDNGEVGNRPYMITEDVDGDLLRDRLPLAAERALEVLRQVV CCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHHH GAVAITINTQTPTPPIGSRSILLTSSDRAVLIEPWWLNNEELRGDMQLYRAPERLKGAAP CEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCHHHCCHHHHHCCHHHHCCCCC DERSIVYSLGLLGYELLTGITPDPNAKDMPSIYQQVNGFVPSLVAALQVATAADPDQRTA CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHH TVAALARDLAAVDSAADAPTKQLVRPLPALRDTMRDMRQNLAQRRTQPTPTPPPQQSPSA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SAAPNWNVAPPKPMMPPRQAPPPIQQQAVQQPPPQYYAPQPAPPVQQGISREELRSELRS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH EIRRETYRRGCLNFIWRRAFGLTLITLLVIGCVWGFTFGRNWLVGGAAKTWACERIPTWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEHHCCCCCE CNLLPGQQSETYIIIQDNTPVYTNQDRNSALVVSLPRNTEVVIRDPATNLTSNGWAKIEI EECCCCCCCCEEEEEECCCCEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEE DDYQGRRITGWIDSLNIAKPQPTVQPNEPDLPTTVGELVFKTLQESNVRTTAEYKSDGSN CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHCCCCCC IIMAIPANTRVIAPDPDAIVTQGGIVWINIVFEKDGQAMTGWISRDLLQQEETP EEEEECCCCEEECCCCCCEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCC >Mature Secondary Structure TQPSAPSTPLLHNRYRVQARLGENRLALVFRATDERLNRSVLVHLLRPDLLENAQLRKR CCCCCCCCCCCCCCEEEEEEECCCEEEEEEECCHHHHHHHHHHHHHCCHHHHHHHHHHH FNDEAQGLAKRTHPGLLDVYDNGEVGNRPYMITEDVDGDLLRDRLPLAAERALEVLRQVV CCHHHHHHHHHCCCCEEEEECCCCCCCCCEEEECCCCCHHHHHCCCHHHHHHHHHHHHHH GAVAITINTQTPTPPIGSRSILLTSSDRAVLIEPWWLNNEELRGDMQLYRAPERLKGAAP CEEEEEEECCCCCCCCCCCEEEEECCCCEEEEEEEECCCHHHCCHHHHHCCHHHHCCCCC DERSIVYSLGLLGYELLTGITPDPNAKDMPSIYQQVNGFVPSLVAALQVATAADPDQRTA CCCHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHH TVAALARDLAAVDSAADAPTKQLVRPLPALRDTMRDMRQNLAQRRTQPTPTPPPQQSPSA HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC SAAPNWNVAPPKPMMPPRQAPPPIQQQAVQQPPPQYYAPQPAPPVQQGISREELRSELRS CCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCHHHHCCCHHHHHHHHHH EIRRETYRRGCLNFIWRRAFGLTLITLLVIGCVWGFTFGRNWLVGGAAKTWACERIPTWA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCHHEHHCCCCCE CNLLPGQQSETYIIIQDNTPVYTNQDRNSALVVSLPRNTEVVIRDPATNLTSNGWAKIEI EECCCCCCCCEEEEEECCCCEEECCCCCCEEEEECCCCCEEEEECCCCCCCCCCEEEEEE DDYQGRRITGWIDSLNIAKPQPTVQPNEPDLPTTVGELVFKTLQESNVRTTAEYKSDGSN CCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEHHCCCCCC IIMAIPANTRVIAPDPDAIVTQGGIVWINIVFEKDGQAMTGWISRDLLQQEETP EEEEECCCCEEECCCCCCEEECCCEEEEEEEEECCCCCHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11997336 [H]