Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899665
Identifier: 159899665
GI number: 159899665
Start: 3975509
End: 3976384
Strand: Direct
Name: 159899665
Synonym: Haur_3147
Alternate gene names: NA
Gene position: 3975509-3976384 (Clockwise)
Preceding gene: 159899664
Following gene: 159899666
Centisome position: 62.64
GC content: 49.54
Gene sequence:
>876_bases ATGAAGGCAATTTTGCAAAAGGAATTTCGCTCGTATCTACGTGGCAATCGAGCGTTTACCACCCTCAGCATCTACTTATT CATTCTCAGTGGCTTGTGTGTGCTGATTTACGCTGGTCAAAGCGAAAGTGGGTTTGTCGATCGCAGTGAGATTGGCTTAA GTTTATATAGCACCGCCGCCGCCGTAGCCTTGTTTCAGCTGACCTTTTTTGCGCCATCGCTGAATGCTTCATCGTTGGGC AGCGAACGCGATCGCCAAACCATCGACGTGTTGATGGTCACGCCTGTGCGGCGCTACCAAATCATCTTGGGCAAGCTGAT TGCGCCTTGTTTATTCCTCTTTTTGCTTAGTTTAGCCAGCCTGCCAATTGGCGCATTGGCCTTGCTGATTGGCGGAATCG AAGCCCGCGACCTATGGATTGCCCTAGCGATTCAATTGGTTACAGTTTTGGGCTATGGCAGCATTGGAATTTGGGGAGCT TCGTGGGCTAAAACCAGCCGTGGTGCAATGATGGCAACCCTTGGCTTAGCATTGGTATTGGCGATTGGGCTGCCGTTACT GGCGATCTTGGTCTTAGCAGTGCTCTCGAATGATCAACCATTGTTTGATTCCATCATGAACAATGGCTTTATTCGCAATC TTGGGGTTGTGGCCTTATCGTTCAGCCCGTTTTTCAGCCTGATAATGTGGATTCAGAGCGTTACCGATGGTCAAGCAACC ACTTGGACTTTAGATCTCCAAGGCCAACTTGGTGGTGGCACAATTTTACAACCATGGGTTATTTCGGTGCTGCTTTGGCT AGTGCTCATCCCCTTCTTGATTTGGCGTAGCTCCAAGCAATTGCAAAAATCGGTTGCCCATTCGAGCGGCGGCTAG
Upstream 100 bases:
>100_bases TGAGCAACCTGATCAGCCAAGGCTTTCGGGTCAATCACTTTGCCGAACGCCAATCCGACCTTGAAGAAGTCTTTTTGCAT GTGACACAGGGAGTGGTGGC
Downstream 100 bases:
>100_bases CAATCGTTGAGCAGCGGCATGCCCTATTGCTCATGCCGCTGCTTTCGCGGTACAATTCAGCCACATGCTGAAATCCAAGG AGGCTGGTATCGCTACACTT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 291
Protein sequence:
>291_residues MKAILQKEFRSYLRGNRAFTTLSIYLFILSGLCVLIYAGQSESGFVDRSEIGLSLYSTAAAVALFQLTFFAPSLNASSLG SERDRQTIDVLMVTPVRRYQIILGKLIAPCLFLFLLSLASLPIGALALLIGGIEARDLWIALAIQLVTVLGYGSIGIWGA SWAKTSRGAMMATLGLALVLAIGLPLLAILVLAVLSNDQPLFDSIMNNGFIRNLGVVALSFSPFFSLIMWIQSVTDGQAT TWTLDLQGQLGGGTILQPWVISVLLWLVLIPFLIWRSSKQLQKSVAHSSGG
Sequences:
>Translated_291_residues MKAILQKEFRSYLRGNRAFTTLSIYLFILSGLCVLIYAGQSESGFVDRSEIGLSLYSTAAAVALFQLTFFAPSLNASSLG SERDRQTIDVLMVTPVRRYQIILGKLIAPCLFLFLLSLASLPIGALALLIGGIEARDLWIALAIQLVTVLGYGSIGIWGA SWAKTSRGAMMATLGLALVLAIGLPLLAILVLAVLSNDQPLFDSIMNNGFIRNLGVVALSFSPFFSLIMWIQSVTDGQAT TWTLDLQGQLGGGTILQPWVISVLLWLVLIPFLIWRSSKQLQKSVAHSSGG >Mature_291_residues MKAILQKEFRSYLRGNRAFTTLSIYLFILSGLCVLIYAGQSESGFVDRSEIGLSLYSTAAAVALFQLTFFAPSLNASSLG SERDRQTIDVLMVTPVRRYQIILGKLIAPCLFLFLLSLASLPIGALALLIGGIEARDLWIALAIQLVTVLGYGSIGIWGA SWAKTSRGAMMATLGLALVLAIGLPLLAILVLAVLSNDQPLFDSIMNNGFIRNLGVVALSFSPFFSLIMWIQSVTDGQAT TWTLDLQGQLGGGTILQPWVISVLLWLVLIPFLIWRSSKQLQKSVAHSSGG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31455; Mature: 31455
Theoretical pI: Translated: 9.71; Mature: 9.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKAILQKEFRSYLRGNRAFTTLSIYLFILSGLCVLIYAGQSESGFVDRSEIGLSLYSTAA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHH AVALFQLTFFAPSLNASSLGSERDRQTIDVLMVTPVRRYQIILGKLIAPCLFLFLLSLAS HHHHHHHHHHCCCCCHHHCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH LPIGALALLIGGIEARDLWIALAIQLVTVLGYGSIGIWGASWAKTSRGAMMATLGLALVL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH AIGLPLLAILVLAVLSNDQPLFDSIMNNGFIRNLGVVALSFSPFFSLIMWIQSVTDGQAT HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHHHHHCCCCCCE TWTLDLQGQLGGGTILQPWVISVLLWLVLIPFLIWRSSKQLQKSVAHSSGG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC >Mature Secondary Structure MKAILQKEFRSYLRGNRAFTTLSIYLFILSGLCVLIYAGQSESGFVDRSEIGLSLYSTAA CCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHEEECCCCCCCCCCHHHHHHHHHHHHH AVALFQLTFFAPSLNASSLGSERDRQTIDVLMVTPVRRYQIILGKLIAPCLFLFLLSLAS HHHHHHHHHHCCCCCHHHCCCCCCHHHEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHH LPIGALALLIGGIEARDLWIALAIQLVTVLGYGSIGIWGASWAKTSRGAMMATLGLALVL CCHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCCCHHHHHHHHHHHH AIGLPLLAILVLAVLSNDQPLFDSIMNNGFIRNLGVVALSFSPFFSLIMWIQSVTDGQAT HHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHEEEHHHHHHHHHHHHHCCCCCCE TWTLDLQGQLGGGTILQPWVISVLLWLVLIPFLIWRSSKQLQKSVAHSSGG EEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA