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The map label for this gene is yerB [H]

Identifier: 159899652

GI number: 159899652

Start: 3961675

End: 3962790

Strand: Direct

Name: yerB [H]

Synonym: Haur_3134

Alternate gene names: 159899652

Gene position: 3961675-3962790 (Clockwise)

Preceding gene: 159899651

Following gene: 159899656

Centisome position: 62.42

GC content: 54.21

Gene sequence:

>1116_bases
ATGCGTCGATGGTTTTCGATTAGCTTATTGCTTTTGTTGGTAGCATGTAGCACCACGGGAGCGCCAACCGCCACTGTGCC
AGCCCAACCCAGCCCAACCGCAACAACCCAACCTAGCCCAACGACTGCACCAACGGCAACAACCCAACCCAGCCCAACCA
TTGAGCCAACCGCAACCCCCATCAGCAGTGACCCACGGACTGGGCGGCCTGCTATGGCACGGGGCACACTAACCCAACGG
CCCTATATCACGATGATCGATAACTTTCCAGCGGCATACCCGCAAACAGGTCTCGATCAGGCAGCCATTGTATTTGAGGC
CTTGGCTGAATATGGCGTAACCCGCTATATGGCTGTCTTCACACCCGATTTGGCCGAGGTTGCAGGCGATTTGGGGCCGA
TTCGCTCGGCGCGGCTCTATTTTGTGCAATGGGCTATGGGCTTTCGGGCAGTCTATACGCATGCTGGTGGCAGCCCCGAA
GGCTTAGAACGCCTCGCCGCCGATGCTAACGATTTGGTGATTGATATCGATTTGGTGAGCCTGGAAAGCCGCCAGATTTT
CGATTACTCACGCCGCTCGTTGGCGCGTGAGGCTCCACATAATTTGTATACCAGCGCTGCTGAAATTGCTCAATATGTTG
ATGATCGGGCTAGCAGTAGTGCGCAAGCTGATGTGAGCGAAGTAGGCTATTTGTTTGCGCCCGAGGCTGCGATAGCTGAG
CCAATCAGCACAATCGATTACTTCTTCATCTATCCCGAAGATCCTGCGGGCTGGCGCTACGACGCTGACACGAACGAATA
TGCACGGTTACGCCGTGGAACAGCGCATATCGATGCAGTCAGTGGCGAGCAACTAACCTTCAAAAGTATTGTAACGATGG
AAGTGGTCGAAGCCCCAATTATCGGCGATGATAAAGGTCGCATCGATCAGCAGGTGATTGGCGAAGGCCGAGCGTTGGTT
TTTGCCAATGGCTCGCTTCAAGAGGCTACTTGGCGCAAGGATTCCGAATCAGCTCCGTTACGGTTTTATGCTGCTAACGC
TGCCGAAATCGTCTTTCCTGCCGGCCCAATCTGGATCGCTGCCATGCCTAGCCTGGATAATGTGAGTTATCAGTAG

Upstream 100 bases:

>100_bases
TTATATTCCTTCGCAATGGTCTTGGCATAAATAAGCAAGCGCCCACATCGTAGGATCAGCTCCAATTCTTGCAATTGGAT
TGTTGTTAGGGAGTTTTTGT

Downstream 100 bases:

>100_bases
GGATCAGGGGCTAGAGGTCAGGGGTCAGTTTTGATCCACGAAGAGCACGAAGGACTATTATTTATCGACTAGCAGGTTCA
AAATCCAGCCATACTAATCT

Product: PT repeat-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 371; Mature: 371

Protein sequence:

>371_residues
MRRWFSISLLLLLVACSTTGAPTATVPAQPSPTATTQPSPTTAPTATTQPSPTIEPTATPISSDPRTGRPAMARGTLTQR
PYITMIDNFPAAYPQTGLDQAAIVFEALAEYGVTRYMAVFTPDLAEVAGDLGPIRSARLYFVQWAMGFRAVYTHAGGSPE
GLERLAADANDLVIDIDLVSLESRQIFDYSRRSLAREAPHNLYTSAAEIAQYVDDRASSSAQADVSEVGYLFAPEAAIAE
PISTIDYFFIYPEDPAGWRYDADTNEYARLRRGTAHIDAVSGEQLTFKSIVTMEVVEAPIIGDDKGRIDQQVIGEGRALV
FANGSLQEATWRKDSESAPLRFYAANAAEIVFPAGPIWIAAMPSLDNVSYQ

Sequences:

>Translated_371_residues
MRRWFSISLLLLLVACSTTGAPTATVPAQPSPTATTQPSPTTAPTATTQPSPTIEPTATPISSDPRTGRPAMARGTLTQR
PYITMIDNFPAAYPQTGLDQAAIVFEALAEYGVTRYMAVFTPDLAEVAGDLGPIRSARLYFVQWAMGFRAVYTHAGGSPE
GLERLAADANDLVIDIDLVSLESRQIFDYSRRSLAREAPHNLYTSAAEIAQYVDDRASSSAQADVSEVGYLFAPEAAIAE
PISTIDYFFIYPEDPAGWRYDADTNEYARLRRGTAHIDAVSGEQLTFKSIVTMEVVEAPIIGDDKGRIDQQVIGEGRALV
FANGSLQEATWRKDSESAPLRFYAANAAEIVFPAGPIWIAAMPSLDNVSYQ
>Mature_371_residues
MRRWFSISLLLLLVACSTTGAPTATVPAQPSPTATTQPSPTTAPTATTQPSPTIEPTATPISSDPRTGRPAMARGTLTQR
PYITMIDNFPAAYPQTGLDQAAIVFEALAEYGVTRYMAVFTPDLAEVAGDLGPIRSARLYFVQWAMGFRAVYTHAGGSPE
GLERLAADANDLVIDIDLVSLESRQIFDYSRRSLAREAPHNLYTSAAEIAQYVDDRASSSAQADVSEVGYLFAPEAAIAE
PISTIDYFFIYPEDPAGWRYDADTNEYARLRRGTAHIDAVSGEQLTFKSIVTMEVVEAPIIGDDKGRIDQQVIGEGRALV
FANGSLQEATWRKDSESAPLRFYAANAAEIVFPAGPIWIAAMPSLDNVSYQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021416
- InterPro:   IPR023158 [H]

Pfam domain/function: PF11258 DUF3048 [H]

EC number: NA

Molecular weight: Translated: 40200; Mature: 40200

Theoretical pI: Translated: 4.34; Mature: 4.34

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRRWFSISLLLLLVACSTTGAPTATVPAQPSPTATTQPSPTTAPTATTQPSPTIEPTATP
CCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ISSDPRTGRPAMARGTLTQRPYITMIDNFPAAYPQTGLDQAAIVFEALAEYGVTRYMAVF
CCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEEEE
TPDLAEVAGDLGPIRSARLYFVQWAMGFRAVYTHAGGSPEGLERLAADANDLVIDIDLVS
CCCHHHHHCCCCCCCHHHEEEEHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEEEEEE
LESRQIFDYSRRSLAREAPHNLYTSAAEIAQYVDDRASSSAQADVSEVGYLFAPEAAIAE
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEECCCHHHHC
PISTIDYFFIYPEDPAGWRYDADTNEYARLRRGTAHIDAVSGEQLTFKSIVTMEVVEAPI
CCCCCEEEEEEECCCCCCEECCCCHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHCCC
IGDDKGRIDQQVIGEGRALVFANGSLQEATWRKDSESAPLRFYAANAAEIVFPAGPIWIA
CCCCCCCHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCEEEEECCCEEEEECCCCEEEE
AMPSLDNVSYQ
ECCCCCCCCCC
>Mature Secondary Structure
MRRWFSISLLLLLVACSTTGAPTATVPAQPSPTATTQPSPTTAPTATTQPSPTIEPTATP
CCCCHHHHHHHHHHHHCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
ISSDPRTGRPAMARGTLTQRPYITMIDNFPAAYPQTGLDQAAIVFEALAEYGVTRYMAVF
CCCCCCCCCCCHHCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHHHHHCHHHEEEEE
TPDLAEVAGDLGPIRSARLYFVQWAMGFRAVYTHAGGSPEGLERLAADANDLVIDIDLVS
CCCHHHHHCCCCCCCHHHEEEEHHHHHHHEEEECCCCCHHHHHHHHCCCCCEEEEEEEEE
LESRQIFDYSRRSLAREAPHNLYTSAAEIAQYVDDRASSSAQADVSEVGYLFAPEAAIAE
CCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCEEECCCHHHHC
PISTIDYFFIYPEDPAGWRYDADTNEYARLRRGTAHIDAVSGEQLTFKSIVTMEVVEAPI
CCCCCEEEEEEECCCCCCEECCCCHHHHHHHCCCCEEEECCCCCEEHHHHHHHHHHHCCC
IGDDKGRIDQQVIGEGRALVFANGSLQEATWRKDSESAPLRFYAANAAEIVFPAGPIWIA
CCCCCCCHHHHHHCCCCEEEEECCCCCHHHCCCCCCCCCEEEEECCCEEEEECCCCEEEE
AMPSLDNVSYQ
ECCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8969499; 9701819; 9384377 [H]