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The map label for this gene is 159899625

Identifier: 159899625

GI number: 159899625

Start: 3920150

End: 3920476

Strand: Direct

Name: 159899625

Synonym: Haur_3106

Alternate gene names: NA

Gene position: 3920150-3920476 (Clockwise)

Preceding gene: 159899621

Following gene: 159899626

Centisome position: 61.77

GC content: 52.6

Gene sequence:

>327_bases
GTGCCAACCTATGTATATGCGTGCCAAGCATGTGGCGCACAATTCGAGCAATTTCAACGCTTCTCTGACGAGCCGCTGAC
CATCTGTCCGCGCTGTCAAGGCACGATCAAGCGTGTGTTTCAACCGGTTGGCGTGGTATTCAAGGGTAGTGGATGGTATA
TTAATGATAGTCGTTCAGGCAATAACAATAGCGCTAGCAGCAAATCAAGCACTCCAGCACCAGGTAGCAGCGATGCTAGC
AGTGCCGCGCCTGCTGCTACTAGCGAAAGCAAGCCTGAAGCACCCAAAGCCGAAGCCAGCAAATCAGAATCATCGGCTGC
GGCCTAA

Upstream 100 bases:

>100_bases
TCGTCTGGTTGATCAGCAACCATAATTACGGTAAAATGAGCCAGAGTGCCTTTTGGGGCTTTATTCCGTTAAACTTTCAT
CCTGTCGGAGGTATGGTACC

Downstream 100 bases:

>100_bases
AGCGACATTCAAGAACCCAAGGTACTTGGCTTAAGGCTAATGGCCTTGGGCTTTCTTTTTGTCTGCGAAAGGATGGATCA
GTATGCGGCATTGGTGGCGT

Product: FmdB family regulatory protein

Products: NA

Alternate protein names: FmdB Family Regulatory Protein; Type I Antifreeze Protein; LOW QUALITY PROTEIN Type I Antifreeze Protein; Regulatory Protein Fmdb Family; FmdB Family Transcriptional Regulator

Number of amino acids: Translated: 108; Mature: 107

Protein sequence:

>108_residues
MPTYVYACQACGAQFEQFQRFSDEPLTICPRCQGTIKRVFQPVGVVFKGSGWYINDSRSGNNNSASSKSSTPAPGSSDAS
SAAPAATSESKPEAPKAEASKSESSAAA

Sequences:

>Translated_108_residues
MPTYVYACQACGAQFEQFQRFSDEPLTICPRCQGTIKRVFQPVGVVFKGSGWYINDSRSGNNNSASSKSSTPAPGSSDAS
SAAPAATSESKPEAPKAEASKSESSAAA
>Mature_107_residues
PTYVYACQACGAQFEQFQRFSDEPLTICPRCQGTIKRVFQPVGVVFKGSGWYINDSRSGNNNSASSKSSTPAPGSSDASS
AAPAATSESKPEAPKAEASKSESSAAA

Specific function: Unknown

COG id: COG2331

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 11231; Mature: 11100

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPTYVYACQACGAQFEQFQRFSDEPLTICPRCQGTIKRVFQPVGVVFKGSGWYINDSRSG
CCCHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCEEECCCCEEEECCCCC
NNNSASSKSSTPAPGSSDASSAAPAATSESKPEAPKAEASKSESSAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
PTYVYACQACGAQFEQFQRFSDEPLTICPRCQGTIKRVFQPVGVVFKGSGWYINDSRSG
CCHHHHHHHHHHHHHHHHHCCCCCCEECCCCHHHHHHHHHHHCEEECCCCEEEECCCCC
NNNSASSKSSTPAPGSSDASSAAPAATSESKPEAPKAEASKSESSAAA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA