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The map label for this gene is yebC [C]

Identifier: 159899549

GI number: 159899549

Start: 3827021

End: 3827779

Strand: Direct

Name: yebC [C]

Synonym: Haur_3030

Alternate gene names: 159899549

Gene position: 3827021-3827779 (Clockwise)

Preceding gene: 159899548

Following gene: 159899550

Centisome position: 60.3

GC content: 49.93

Gene sequence:

>759_bases
ATGTCAGGGCATACAAAATGGCATGAAATCCGCCGCAAAAAAGGGGTTCTTGATCAACGCCGAGGCCAACGCTGGACGAA
AATCGCTCGTGATATTACGATCGCCGCCCGCGAAGGTGGTGGCAGCCCCGACATGAACTTCCGGCTGCGCTTGGCGATTG
AAAAAGCCAAAGCCGATAATATGCCAGCGGATAATATTCAACGAGCAATTGATCGCGGCACTGGCGTAAGCGGTGAAGCA
GCGCTCGAAGAAGTCACCTACGAAGGCTATGGCCCAGGTGGCATTGCCGTTATTGTCGATGCTGCCACTGACAATCGTAA
CCGCACCGTTTCGGAAATTCGCACCGCCTTTAACAAAAATGGCGGCACGCTTGGCGAAGGCGGTTCAGTCGGTTGGATGT
TTGATATCAAAGGTTTGATCAGTATTGATCGGACTGAAAAAACCGACCCCGATGAAGTAACCTTGCTGGCGATCGATGCC
GATGCTGATGATGTAATTGTCAACGATGATGCAATTATTGTTTACACTGAATTTAGCAAATTGGCGGCGGTGCGCGATGC
GCTCAACGAGCAAGGCCTAAAAATCAGCACTGCTGAAAAAACCATGCTCGCCAAAACAATCATGGAAGCCGATGAAGCGA
CCACCTTCCAGATTTTGCGGCTGATGGAGCGGCTCGAAGATCTCGATGATGTCCAAAAAGTCTATAGCAACCTAGAAGTA
TCCGATGAATTAGCCGAAAAATATGCCGAACAAGGCTAG

Upstream 100 bases:

>100_bases
TTTGCCAAGCTTCTCACGCATACGCTATAATGGTCAACAAAAACTTATAATTGAGCGGCACACTGGGGTGTGCACAATTG
TTAACCGTAGGAGTTATCCG

Downstream 100 bases:

>100_bases
CTCATTGGCTGGATGCAGCCCCAACCAGCACGGTTTTAACTGTGCTGGTTTTGTTTAAATTTGTGTTATCCCCACAAAAT
CCCAGCCAAATAGTAAAACA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 252; Mature: 251

Protein sequence:

>252_residues
MSGHTKWHEIRRKKGVLDQRRGQRWTKIARDITIAAREGGGSPDMNFRLRLAIEKAKADNMPADNIQRAIDRGTGVSGEA
ALEEVTYEGYGPGGIAVIVDAATDNRNRTVSEIRTAFNKNGGTLGEGGSVGWMFDIKGLISIDRTEKTDPDEVTLLAIDA
DADDVIVNDDAIIVYTEFSKLAAVRDALNEQGLKISTAEKTMLAKTIMEADEATTFQILRLMERLEDLDDVQKVYSNLEV
SDELAEKYAEQG

Sequences:

>Translated_252_residues
MSGHTKWHEIRRKKGVLDQRRGQRWTKIARDITIAAREGGGSPDMNFRLRLAIEKAKADNMPADNIQRAIDRGTGVSGEA
ALEEVTYEGYGPGGIAVIVDAATDNRNRTVSEIRTAFNKNGGTLGEGGSVGWMFDIKGLISIDRTEKTDPDEVTLLAIDA
DADDVIVNDDAIIVYTEFSKLAAVRDALNEQGLKISTAEKTMLAKTIMEADEATTFQILRLMERLEDLDDVQKVYSNLEV
SDELAEKYAEQG
>Mature_251_residues
SGHTKWHEIRRKKGVLDQRRGQRWTKIARDITIAAREGGGSPDMNFRLRLAIEKAKADNMPADNIQRAIDRGTGVSGEAA
LEEVTYEGYGPGGIAVIVDAATDNRNRTVSEIRTAFNKNGGTLGEGGSVGWMFDIKGLISIDRTEKTDPDEVTLLAIDAD
ADDVIVNDDAIIVYTEFSKLAAVRDALNEQGLKISTAEKTMLAKTIMEADEATTFQILRLMERLEDLDDVQKVYSNLEVS
DELAEKYAEQG

Specific function: Unknown

COG id: COG0217

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TACO1 family

Homologues:

Organism=Homo sapiens, GI27545315, Length=247, Percent_Identity=30.3643724696356, Blast_Score=107, Evalue=8e-24,
Organism=Escherichia coli, GI1788171, Length=246, Percent_Identity=48.3739837398374, Blast_Score=233, Evalue=1e-62,
Organism=Escherichia coli, GI1788294, Length=236, Percent_Identity=37.2881355932203, Blast_Score=142, Evalue=3e-35,
Organism=Caenorhabditis elegans, GI17556100, Length=246, Percent_Identity=24.390243902439, Blast_Score=72, Evalue=4e-13,
Organism=Saccharomyces cerevisiae, GI6321458, Length=267, Percent_Identity=31.8352059925094, Blast_Score=111, Evalue=1e-25,
Organism=Drosophila melanogaster, GI24583305, Length=251, Percent_Identity=25.0996015936255, Blast_Score=69, Evalue=2e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y3030_HERA2 (A9B4U5)

Other databases:

- EMBL:   CP000875
- RefSeq:   YP_001545796.1
- ProteinModelPortal:   A9B4U5
- SMR:   A9B4U5
- GeneID:   5734887
- GenomeReviews:   CP000875_GR
- KEGG:   hau:Haur_3030
- HOGENOM:   HBG715231
- OMA:   VYANFDI
- ProtClustDB:   PRK00110
- BioCyc:   HAUR316274:HAUR_3030-MONOMER
- HAMAP:   MF_00693
- InterPro:   IPR002876
- InterPro:   IPR017856
- Gene3D:   G3DSA:1.10.10.200
- PANTHER:   PTHR12532
- TIGRFAMs:   TIGR01033

Pfam domain/function: PF01709 DUF28; SSF75625 DUF28

EC number: NA

Molecular weight: Translated: 27736; Mature: 27605

Theoretical pI: Translated: 4.51; Mature: 4.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGHTKWHEIRRKKGVLDQRRGQRWTKIARDITIAAREGGGSPDMNFRLRLAIEKAKADN
CCCCHHHHHHHHHHCCHHHHHCHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEEECCCCC
MPADNIQRAIDRGTGVSGEAALEEVTYEGYGPGGIAVIVDAATDNRNRTVSEIRTAFNKN
CCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC
GGTLGEGGSVGWMFDIKGLISIDRTEKTDPDEVTLLAIDADADDVIVNDDAIIVYTEFSK
CCCCCCCCCEEEEEEECEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEECHHH
LAAVRDALNEQGLKISTAEKTMLAKTIMEADEATTFQILRLMERLEDLDDVQKVYSNLEV
HHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDELAEKYAEQG
CHHHHHHHHHCC
>Mature Secondary Structure 
SGHTKWHEIRRKKGVLDQRRGQRWTKIARDITIAAREGGGSPDMNFRLRLAIEKAKADN
CCCHHHHHHHHHHCCHHHHHCHHHHHHHHHEEEEEECCCCCCCCCEEEEEEEEECCCCC
MPADNIQRAIDRGTGVSGEAALEEVTYEGYGPGGIAVIVDAATDNRNRTVSEIRTAFNKN
CCHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCEEEEEECCCCCCCCHHHHHHHHHCCC
GGTLGEGGSVGWMFDIKGLISIDRTEKTDPDEVTLLAIDADADDVIVNDDAIIVYTEFSK
CCCCCCCCCEEEEEEECEEEEECCCCCCCCCCEEEEEEECCCCCEEECCCEEEEEECHHH
LAAVRDALNEQGLKISTAEKTMLAKTIMEADEATTFQILRLMERLEDLDDVQKVYSNLEV
HHHHHHHHHHCCCEEEHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCC
SDELAEKYAEQG
CHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA