Definition | Herpetosiphon aurantiacus ATCC 23779 chromosome, complete genome. |
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Accession | NC_009972 |
Length | 6,346,587 |
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The map label for this gene is 159899462
Identifier: 159899462
GI number: 159899462
Start: 3718123
End: 3718668
Strand: Direct
Name: 159899462
Synonym: Haur_2943
Alternate gene names: NA
Gene position: 3718123-3718668 (Clockwise)
Preceding gene: 159899461
Following gene: 159899463
Centisome position: 58.58
GC content: 52.38
Gene sequence:
>546_bases ATGACTAAGCTGTGGCAGCCCAATCCTGCGCTGCTCTATCATCTCAGCGAAGATGCCACGATTAGTCAATTTGCGCCACG TCCGCATCCGCGCAAGCCCGAGCATCCACCAATCGTTTGGGCAATTCAAGGCAGTCTTGTGGCAAATTATTTGTTGCCAC GAGATTGCCCCCGCATCTGCATGCGCTGCGATCAGCAGACCAGCCCCGACGATCAAACTCGTTTTTTTGGCTTGAGCAAC GCCCAAACAATTATCGCAATCGAGCATGCTTGGCTCGACCGAATTCGTGCGACGACCCTGTATGCCTATGCGTTTGAGCA GGCAGATTTTGAGCTTGCGGATGCAGCGGCAGGCTATTGGATTAGCTTTCGTCACGTTGACCCAATCGCCATGCATCCAA TTGATGATCTCTTGGGTCAGCTTGTCAGTTTGGGGGTTGAATTACACGTCATGCCCAATTTATGGCGTTTGCATGACTCG GTGGCCCAATCGAGCCTGCAATTTTCGATGATTCGCATGCGCAATGCCACGGCACGTAGCGAATAG
Upstream 100 bases:
>100_bases ATCCCCTTGGGCAATCAGCGCTACGACGAAATTTTGATGGATATTGTGCGCGACGACGTTGATTTGCGAGCTATGAGTAT GCTGGTTCCTGGGGCAAATC
Downstream 100 bases:
>100_bases GTCACCATGGGTAGTGCTTCCTCCCCCCAGCGGTTGCGCACAGCATGCTATAATGGGCGCGTTGTCAGCCATAAGGAGCA TTCTCAATGATTGACCGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTKLWQPNPALLYHLSEDATISQFAPRPHPRKPEHPPIVWAIQGSLVANYLLPRDCPRICMRCDQQTSPDDQTRFFGLSN AQTIIAIEHAWLDRIRATTLYAYAFEQADFELADAAAGYWISFRHVDPIAMHPIDDLLGQLVSLGVELHVMPNLWRLHDS VAQSSLQFSMIRMRNATARSE
Sequences:
>Translated_181_residues MTKLWQPNPALLYHLSEDATISQFAPRPHPRKPEHPPIVWAIQGSLVANYLLPRDCPRICMRCDQQTSPDDQTRFFGLSN AQTIIAIEHAWLDRIRATTLYAYAFEQADFELADAAAGYWISFRHVDPIAMHPIDDLLGQLVSLGVELHVMPNLWRLHDS VAQSSLQFSMIRMRNATARSE >Mature_180_residues TKLWQPNPALLYHLSEDATISQFAPRPHPRKPEHPPIVWAIQGSLVANYLLPRDCPRICMRCDQQTSPDDQTRFFGLSNA QTIIAIEHAWLDRIRATTLYAYAFEQADFELADAAAGYWISFRHVDPIAMHPIDDLLGQLVSLGVELHVMPNLWRLHDSV AQSSLQFSMIRMRNATARSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20663; Mature: 20532
Theoretical pI: Translated: 6.50; Mature: 6.50
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKLWQPNPALLYHLSEDATISQFAPRPHPRKPEHPPIVWAIQGSLVANYLLPRDCPRIC CCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCHHHHH MRCDQQTSPDDQTRFFGLSNAQTIIAIEHAWLDRIRATTLYAYAFEQADFELADAAAGYW HHCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHEEEHHCCCCCHHHHCCCCEE ISFRHVDPIAMHPIDDLLGQLVSLGVELHVMPNLWRLHDSVAQSSLQFSMIRMRNATARS EEEECCCCEEECCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC E C >Mature Secondary Structure TKLWQPNPALLYHLSEDATISQFAPRPHPRKPEHPPIVWAIQGSLVANYLLPRDCPRIC CCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCCCCEEEEECCHHHHHHCCCCCHHHHH MRCDQQTSPDDQTRFFGLSNAQTIIAIEHAWLDRIRATTLYAYAFEQADFELADAAAGYW HHCCCCCCCCCCCEEEECCCCCEEEEEHHHHHHHHHHHHHEEEHHCCCCCHHHHCCCCEE ISFRHVDPIAMHPIDDLLGQLVSLGVELHVMPNLWRLHDSVAQSSLQFSMIRMRNATARS EEEECCCCEEECCHHHHHHHHHHCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHCCCCCC E C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA